Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / uncbiag/ICON issues and pull requests

#80 - standalone ICON and GradICON losses for registration network training

Pull Request - State: open - Opened by BailiangJ 5 months ago - 3 comments

#79 - GradICON and ICON loss without using network wrapper

Issue - State: open - Opened by iyerkrithika21 6 months ago - 2 comments

#78 - Input shape requirements

Issue - State: open - Opened by koegl 6 months ago - 1 comment

#77 - Fix MIND-SSC

Pull Request - State: closed - Opened by basardemir 6 months ago

#76 - Add squared lncc and mind-ssc losses

Pull Request - State: closed - Opened by basardemir 6 months ago

#75 - simplify_mermaidlite

Pull Request - State: closed - Opened by HastingsGreer 9 months ago

#74 - Move ConstrICON code into ICON

Pull Request - State: open - Opened by HastingsGreer 10 months ago

#71 - Make dx, dy, dz consistent (eliminates broadcasting)

Pull Request - State: open - Opened by HastingsGreer 10 months ago - 1 comment

#70 - Question of Gaussian of Iepsilon

Issue - State: closed - Opened by BailiangJ 10 months ago - 1 comment

#69 - Start testing for python 12

Pull Request - State: closed - Opened by HastingsGreer 11 months ago - 2 comments

#68 - lung medical image registration

Issue - State: closed - Opened by lxy51 11 months ago - 2 comments

#67 - Update losses.py

Pull Request - State: closed - Opened by HastingsGreer about 1 year ago

#66 - GradICON requires the itk_wrapper

Pull Request - State: closed - Opened by curiale about 1 year ago - 1 comment

#65 - 1.1.2

Pull Request - State: closed - Opened by HastingsGreer about 1 year ago

#64 - DONT MERGE

Pull Request - State: closed - Opened by HastingsGreer over 1 year ago

#63 - Reduce memory footprint

Pull Request - State: closed - Opened by HastingsGreer almost 2 years ago - 1 comment

#62 - Losses change

Pull Request - State: closed - Opened by HastingsGreer almost 2 years ago

#61 - vendor_gaussian_kernel

Pull Request - State: closed - Opened by HastingsGreer almost 2 years ago

#60 - lung registration

Issue - State: open - Opened by z88888888888 almost 2 years ago - 5 comments

#59 - EHN: Change predefined image types for input images

Pull Request - State: closed - Opened by curiale almost 2 years ago

#58 - Update README.md

Pull Request - State: closed - Opened by lintian-a almost 2 years ago

#57 - remove unneeded check

Pull Request - State: closed - Opened by HastingsGreer almost 2 years ago

#56 - HCP Fix

Pull Request - State: closed - Opened by lintian-a almost 2 years ago

#55 - ICON-console-scripts

Pull Request - State: open - Opened by HastingsGreer almost 2 years ago

#54 - Add multichanel support

Pull Request - State: closed - Opened by lintian-a about 2 years ago - 2 comments

#53 - make sure we aren't scaling a signed short image to [0, 1)

Pull Request - State: closed - Opened by HastingsGreer about 2 years ago - 4 comments

#52 - new_experiments

Pull Request - State: closed - Opened by HastingsGreer about 2 years ago

#51 - scale conventional regularizers

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#49 - Add SVF, BendingEnergyLoss, code cleanup

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#48 - Brain evaluation

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#47 - Update register_fives.rst

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#46 - Where is the OAI training and testing dataset?

Issue - State: closed - Opened by tuffr5 over 2 years ago - 2 comments

#45 - improve UX of monai wrapper

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago - 1 comment

#44 - Reduce model size by generating maps at runtime

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#43 - Doc update

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago - 3 comments

#42 - IF weight download fails, bad file persists.

Issue - State: open - Opened by HastingsGreer over 2 years ago - 2 comments

#41 - [WIP] Add lung experiments script.

Pull Request - State: closed - Opened by lintian-a over 2 years ago - 2 comments

#40 - Itk wrapper bug

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago - 2 comments

#39 - Add AdaptiveNCC class to losses module.

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#38 - Actually invert map for grid visualization

Issue - State: open - Opened by HastingsGreer over 2 years ago - 1 comment

#37 - Training with new api

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#36 - direct optimization

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#35 - training fixes

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#34 - direct optimization

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#33 - move copd loader into library

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#32 - provide fine tuning support

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#31 - fix network last layer

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#30 - lung finetune

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#29 - Itk lung

Pull Request - State: closed - Opened by HastingsGreer over 2 years ago

#28 - refactor gradientICON

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#27 - Retina dataset

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#26 - WIP: upgrade ITK test

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#25 - document

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#24 - Update itk_wrapper.py

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#23 - 1d training for marc

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#22 - Create windows-test-action.yml

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#21 - Update icon-registration to use new itk api

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#20 - Use more supported transform

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#19 - Remove dead code found by lin tian

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#18 - add pretrained gradicon model

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago - 1 comment

#17 - Evaluate OAI DICE using itk interface

Issue - State: closed - Opened by HastingsGreer almost 3 years ago - 1 comment

#16 - Store identity maps only once

Issue - State: closed - Opened by HastingsGreer almost 3 years ago

#15 - Switch from mermaid convention to torch.nn.grid convention

Issue - State: closed - Opened by HastingsGreer almost 3 years ago

#13 - commit splits for reproduction

Pull Request - State: closed - Opened by HastingsGreer almost 3 years ago

#11 - dimension unhardcoded

Pull Request - State: closed - Opened by HastingsGreer about 3 years ago

#10 - write outputs

Pull Request - State: closed - Opened by HastingsGreer about 3 years ago

#9 - enable cpu or gpu?

Pull Request - State: closed - Opened by HastingsGreer about 3 years ago

#8 - Add a wrapper that inputs and outputs itkObjects with correct spacing

Pull Request - State: closed - Opened by HastingsGreer about 3 years ago

#7 - ENH: Fix warped output image alignment for training visualization

Pull Request - State: closed - Opened by tbirdso over 3 years ago - 1 comment

#6 - BUG: Remove fixed batch size in training method

Pull Request - State: closed - Opened by tbirdso over 3 years ago - 2 comments

#5 - Beautification+docs

Pull Request - State: closed - Opened by HastingsGreer over 3 years ago

#4 - initial commit for continuous integration

Pull Request - State: closed - Opened by HastingsGreer over 3 years ago

#3 - Add "What people are saying"

Pull Request - State: closed - Opened by thewtex over 3 years ago - 1 comment

#2 - itk updates

Pull Request - State: closed - Opened by thewtex over 3 years ago - 2 comments

#1 - Pip

Pull Request - State: closed - Opened by HastingsGreer over 3 years ago