Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / ugentbiomath/covid19-model issues and pull requests

#394 - EPNM paper review

Pull Request - State: closed - Opened by twallema about 1 month ago

#393 - Fix infected not going back home

Pull Request - State: closed - Opened by twallema 9 months ago

#392 - Tryout Python 3.12

Pull Request - State: closed - Opened by twallema 9 months ago

#391 - Toy IBM model

Pull Request - State: closed - Opened by twallema 11 months ago

#390 - Revise QALY chapter PhD

Pull Request - State: closed - Opened by twallema about 1 year ago

#389 - Validate postponement care wolf

Pull Request - State: closed - Opened by twallema about 1 year ago

#388 - Validate results wolf again

Pull Request - State: closed - Opened by twallema over 1 year ago

#387 - Validate computations long-COVID + COVID-19 deaths Wolf

Pull Request - State: closed - Opened by twallema over 1 year ago

#386 - Update the EPNM manuscript

Pull Request - State: closed - Opened by twallema over 1 year ago

#385 - Split school types

Pull Request - State: closed - Opened by twallema over 1 year ago

#384 - Ammod-D23-00192R2

Pull Request - State: closed - Opened by twallema over 1 year ago

#383 - Mild cases spatial calibration + aggregation Brussels and Brabant

Pull Request - State: closed - Opened by twallema over 1 year ago

#382 - QALY calculation scripts and results

Pull Request - State: closed - Opened by woldmuyn over 1 year ago

#381 - Restore manuscript 2

Pull Request - State: closed - Opened by twallema over 1 year ago

#380 - Restructure QALY model data

Pull Request - State: closed - Opened by twallema over 1 year ago

#379 - Weekday-weekend distinction

Pull Request - State: closed - Opened by twallema over 1 year ago

#378 - Plot fit economic model

Pull Request - State: closed - Opened by twallema almost 2 years ago

#377 - Fix long-COVID confidence intervals + fixing path errors

Pull Request - State: closed - Opened by woldmuyn almost 2 years ago

#376 - Windows path issues

Issue - State: open - Opened by woldmuyn almost 2 years ago

#375 - Merge changes wolf

Pull Request - State: closed - Opened by twallema almost 2 years ago

#374 - Fix gitignore

Pull Request - State: closed - Opened by twallema almost 2 years ago

#373 - Split covid19model between epidemiological model and economic model

Pull Request - State: closed - Opened by twallema almost 2 years ago

#372 - Economic model - data + calibration script

Pull Request - State: closed - Opened by twallema almost 2 years ago

#371 - Calibration arrondissements + mentality function

Pull Request - State: closed - Opened by twallema almost 2 years ago

#370 - Merge with pySODM 0.2.0

Pull Request - State: closed - Opened by twallema about 2 years ago

#369 - Merge with pySODM

Pull Request - State: closed - Opened by twallema about 2 years ago

#368 - time dependant functions not working for stratified parameters

Issue - State: open - Opened by woldmuyn over 2 years ago - 1 comment

#366 - Problems installing `h5py` / importing `netCDF4`

Issue - State: open - Opened by woldmuyn over 2 years ago

#365 - Calibrating model requires data with `date` as first index

Issue - State: open - Opened by woldmuyn over 2 years ago - 1 comment

#364 - `os.getcwd()` on Windows not the same as on Linux?

Issue - State: open - Opened by woldmuyn over 2 years ago

#363 - Small bugfix woldmuyn calibration

Pull Request - State: closed - Opened by twallema over 2 years ago

#362 - Further improve calibration workflow

Pull Request - State: closed - Opened by twallema over 2 years ago

#361 - Split C and ICU states in national and spatial model

Pull Request - State: closed - Opened by twallema over 2 years ago

#360 - Calibration Influenza model Wolf

Pull Request - State: closed - Opened by twallema over 2 years ago

#359 - Automatic alignment calibration axes

Pull Request - State: closed - Opened by twallema over 2 years ago

#358 - Stochastic COVID-19 models

Pull Request - State: closed - Opened by twallema over 2 years ago

#357 - Some additional changes related to #356 (Sensitivity analysis)

Pull Request - State: closed - Opened by twallema over 2 years ago

#356 - Redo sensitivity analysis national model

Pull Request - State: closed - Opened by twallema over 2 years ago

#355 - Fix some code inconveniences

Pull Request - State: closed - Opened by twallema over 2 years ago

#354 - Spatial model calibration

Pull Request - State: closed - Opened by twallema over 2 years ago

#353 - Rectify gitignore postponement non covid care data

Pull Request - State: closed - Opened by twallema over 2 years ago

#352 - Postponement of non-COVID-19 hospital care: timeseries

Pull Request - State: closed - Opened by twallema over 2 years ago

#351 - Tryout national model with eff_schools back in calibration

Pull Request - State: closed - Opened by twallema over 2 years ago

#350 - Just a test

Pull Request - State: closed - Opened by woldmuyn over 2 years ago

#349 - Create test.txt

Pull Request - State: closed - Opened by woldmuyn over 2 years ago

#348 - Change in model structure of national model after sensitivity analysis

Pull Request - State: closed - Opened by twallema over 2 years ago

#346 - Multiprocessing for sim function in base.py

Pull Request - State: closed - Opened by twallema over 2 years ago

#345 - Improved sobol sensitivity analysis

Pull Request - State: closed - Opened by twallema over 2 years ago

#344 - Build timeseries postponenement non-covid-19 care

Pull Request - State: closed - Opened by twallema over 2 years ago

#343 - Incremental omicron calibrations

Pull Request - State: closed - Opened by twallema over 2 years ago

#342 - Redo figures manuscript

Pull Request - State: closed - Opened by twallema over 2 years ago

#341 - Finish the calibrations of the hybrid vaccination models

Pull Request - State: closed - Opened by twallema over 2 years ago

#340 - Remove all spatial rescaling TDPFs, models.py, init function

Pull Request - State: closed - Opened by twallema over 2 years ago

#339 - Tryout new hosp propensity

Pull Request - State: closed - Opened by twallema over 2 years ago

#338 - Verify hybrid vaccination module works for both models

Pull Request - State: closed - Opened by twallema over 2 years ago

#337 - Implement hybrid vaccination spatial model

Pull Request - State: closed - Opened by twallema over 2 years ago

#336 - Elaborate calibration national model

Pull Request - State: closed - Opened by twallema over 2 years ago

#335 - Implement hybrid stratified rescaling model

Pull Request - State: closed - Opened by twallema over 2 years ago

#334 - Calibrate national stratified vacc winter 2122

Pull Request - State: closed - Opened by twallema over 2 years ago

#333 - Bugfix in stochastic model variant

Pull Request - State: closed - Opened by twallema almost 3 years ago

#332 - Omicron calibration scripts

Pull Request - State: closed - Opened by twallema almost 3 years ago

#331 - Make visualizations for new manuscript

Pull Request - State: closed - Opened by twallema almost 3 years ago

#330 - Update environment

Pull Request - State: closed - Opened by twallema almost 3 years ago

#329 - Revert "Create more visualisation Notebooks for paper"

Pull Request - State: closed - Opened by twallema almost 3 years ago

#328 - Create more visualisation Notebooks for paper

Pull Request - State: closed - Opened by mrollier almost 3 years ago

#327 - Verify stratified vacc model works

Pull Request - State: closed - Opened by twallema almost 3 years ago

#326 - Calibration until march 2021

Pull Request - State: closed - Opened by twallema almost 3 years ago

#325 - Formalize estimation overdispersion

Pull Request - State: closed - Opened by twallema almost 3 years ago

#324 - Formalize rescaling functions

Pull Request - State: closed - Opened by twallema almost 3 years ago

#323 - Class implementation of objective functions

Pull Request - State: closed - Opened by twallema almost 3 years ago

#322 - Feature work

Pull Request - State: closed - Opened by twallema almost 3 years ago

#321 - Revert "Add rescaling CSV update method and its results (provincial and national)"

Pull Request - State: closed - Opened by twallema almost 3 years ago - 1 comment

#320 - Add rescaling CSV update method and its results (provincial and national)

Pull Request - State: closed - Opened by mrollier almost 3 years ago

#319 - Calibrate spatial model

Pull Request - State: closed - Opened by twallema almost 3 years ago

#318 - Init fcn calibration script

Pull Request - State: closed - Opened by twallema almost 3 years ago

#317 - Bugfix K_inf in refactor spatial model

Pull Request - State: closed - Opened by twallema almost 3 years ago

#316 - Adjustments to previous PR when running this (twallema)

Pull Request - State: closed - Opened by twallema almost 3 years ago

#315 - Implement new vacc and voc tdpf

Pull Request - State: closed - Opened by mrollier almost 3 years ago

#314 - Slim down conda env

Pull Request - State: closed - Opened by twallema almost 3 years ago

#313 - Gitkraken on workstation

Pull Request - State: closed - Opened by twallema almost 3 years ago

#312 - Fix mobility matrix definition and load functions

Pull Request - State: closed - Opened by mrollier about 3 years ago

#311 - Minor omicron tweak

Pull Request - State: closed - Opened by twallema about 3 years ago

#310 - Cleanup dependencies

Pull Request - State: closed - Opened by twallema about 3 years ago

#309 - Omicron implementation + generalization

Pull Request - State: closed - Opened by twallema about 3 years ago

#308 - Notebook additions for the creation of pretty plots

Pull Request - State: closed - Opened by mrollier about 3 years ago

#307 - Streamline spatial model

Pull Request - State: closed - Opened by twallema about 3 years ago

#306 - Formalize initial condition

Pull Request - State: closed - Opened by twallema about 3 years ago

#305 - Spatial multivacc model

Pull Request - State: closed - Opened by twallema about 3 years ago

#304 - Policy report version 1.2

Pull Request - State: closed - Opened by twallema about 3 years ago

#303 - Streamline national model

Pull Request - State: closed - Opened by twallema about 3 years ago

#302 - Remove obsolete code

Pull Request - State: closed - Opened by twallema about 3 years ago

#301 - Tryout MPC controller

Pull Request - State: closed - Opened by twallema about 3 years ago

#300 - Uncoupled economic IO model

Pull Request - State: closed - Opened by twallema about 3 years ago

#299 - Tentative: Policy report version 1.2

Pull Request - State: closed - Opened by twallema about 3 years ago

#280 - Tryout Sobol variance decomposition

Pull Request - State: closed - Opened by twallema over 3 years ago

#254 - Spatial vaccination

Pull Request - State: closed - Opened by JennaVergeynst almost 4 years ago

#100 - update function documentation

Pull Request - State: closed - Opened by JennaVergeynst over 4 years ago