Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / ufo-kit/tofu issues and pull requests

#136 - Find large spots median hysth

Pull Request - State: closed - Opened by tfarago 6 months ago - 4 comments

#135 - ez: MPI stitching support for SLURM environment

Pull Request - State: closed - Opened by ldorofeeva 8 months ago - 1 comment

#134 - Bump jinja2 from 3.1.2 to 3.1.3 in /docs

Pull Request - State: open - Opened by dependabot[bot] 11 months ago
Labels: dependencies

#133 - Copy node missing in tofu flow

Issue - State: open - Opened by MarcusZuber about 1 year ago

#132 - Make a simple 3D reco example

Issue - State: open - Opened by tfarago about 1 year ago - 3 comments
Labels: enhancement

#131 - Morphology

Pull Request - State: closed - Opened by tfarago about 1 year ago

#130 - tofu flow Qt float issue

Issue - State: closed - Opened by tfarago over 1 year ago - 3 comments
Labels: bug

#129 - tofu flow: seg fault

Issue - State: open - Opened by farhi over 1 year ago - 8 comments

#128 - Inpaint

Pull Request - State: closed - Opened by tfarago over 1 year ago
Labels: enhancement

#127 - Mem in out

Pull Request - State: closed - Opened by tfarago over 1 year ago

#126 - Add --output-rescale

Pull Request - State: open - Opened by tfarago almost 2 years ago - 12 comments

#125 - Fuse phase retrieval and FBP filter

Pull Request - State: closed - Opened by tfarago about 2 years ago

#124 - find-large-spots: enable vertical sigma

Pull Request - State: closed - Opened by tfarago over 2 years ago

#123 - Closed #122: Added qtimer to make sure that EditingFinished signals go through bef…

Pull Request - State: closed - Opened by sgasilov over 2 years ago - 1 comment

#122 - ez: import parameters does not update projections directory

Issue - State: closed - Opened by tfarago over 2 years ago - 1 comment
Labels: bug

#121 - Enable aborting

Pull Request - State: closed - Opened by tfarago over 2 years ago - 1 comment

#120 - Exit gracefully on keyboardinterrupt

Issue - State: closed - Opened by tfarago over 2 years ago

#119 - Update docs

Pull Request - State: closed - Opened by tfarago over 2 years ago
Labels: in progress

#118 - Replace xdg by pyxdg

Pull Request - State: closed - Opened by tfarago over 2 years ago - 2 comments

#117 - ValueError: Namespace Ufo not available

Issue - State: closed - Opened by dengtijian over 2 years ago - 5 comments

#116 - What is the license for tofu?

Issue - State: closed - Opened by codehelp over 2 years ago - 1 comment

#115 - Many changes in tofu ez

Pull Request - State: closed - Opened by sgasilov over 2 years ago - 8 comments

#114 - Fix integer divisions

Pull Request - State: closed - Opened by tfarago over 2 years ago - 1 comment

#113 - Does tofu support Python3?

Issue - State: closed - Opened by dengtijian almost 3 years ago - 1 comment

#112 - Add ez

Pull Request - State: closed - Opened by tfarago over 3 years ago - 2 comments

#111 - Rang and list issues in the new python(3.9)

Issue - State: closed - Opened by huyuhuster over 3 years ago - 2 comments

#110 - Improve default padding (suggestion)

Issue - State: closed - Opened by sgasilov over 3 years ago - 3 comments

#109 - Add save ufo-task-graph to json file

Pull Request - State: closed - Opened by MarcusZuber over 3 years ago - 2 comments
Labels: enhancement

#108 - Do you plan to support the HDF5 input？

Issue - State: closed - Opened by huyuhuster over 3 years ago - 2 comments

#107 - Possibility to connect a memory-out sink in genreco

Issue - State: open - Opened by MarcusZuber over 3 years ago - 3 comments
Labels: enhancement

#106 - INFO:Couldn't determine image dimensions

Issue - State: closed - Opened by Sinapzy almost 4 years ago - 2 comments

#105 - Do you plan to support the PyQt4 ?

Issue - State: closed - Opened by huyuhuster about 4 years ago - 4 comments

#104 - Scanning detector-angle-y does not work properly in tofu reco

Issue - State: open - Opened by MarcusZuber about 4 years ago - 1 comment

#103 - Flow

Pull Request - State: closed - Opened by tfarago about 4 years ago - 8 comments
Labels: enhancement

#102 - phase retrieval: enable separate x and y distance

Pull Request - State: closed - Opened by tfarago over 4 years ago

#101 - Reconstruction failed

Issue - State: closed - Opened by Sinapzy over 4 years ago - 2 comments

#100 - Python3

Pull Request - State: closed - Opened by tfarago over 4 years ago
Labels: in progress

#99 - gui: support multitif in axis finding tab

Pull Request - State: closed - Opened by tfarago over 4 years ago - 6 comments

#98 - Particularities with ufo-kit on Ubuntu 18.04 (64-bit)

Issue - State: closed - Opened by mikcieslak over 4 years ago - 16 comments

#97 - Update reco padding

Pull Request - State: closed - Opened by tfarago almost 5 years ago

#96 - Don't Crop Padded Projections Before Backprojection

Issue - State: closed - Opened by tfarago almost 5 years ago - 1 comment
Labels: enhancement

#95 - preprocess: unify phase retrieval output

Pull Request - State: closed - Opened by tfarago almost 5 years ago - 3 comments

#94 - Unify Phase Retrieval Output

Issue - State: closed - Opened by tfarago almost 5 years ago
Labels: enhancement

#93 - Single file output

Pull Request - State: closed - Opened by tfarago almost 5 years ago
Labels: enhancement

#91 - ValueError: Namespace ufo not available

Issue - State: closed - Opened by Mary-Cole almost 5 years ago - 7 comments

#90 - Reconstruct function in ufo-reconstruct gui does not work properly

Issue - State: closed - Opened by Sinapzy about 5 years ago - 13 comments

#89 - confused: reconstructed image weired

Issue - State: closed - Opened by demonlj about 5 years ago - 3 comments

#88 - Enhancement: add flat-field multiplier parameter to ffc filter

Pull Request - State: closed - Opened by ldorofeeva over 5 years ago

#87 - Add find large spots

Pull Request - State: closed - Opened by tfarago over 5 years ago

#86 - AttributeError: 'gi._gi.GProps' object has no attribute 'bytes_per_file'

Issue - State: closed - Opened by tiagocoutinho over 5 years ago - 8 comments

#85 - Enhancement: add flat-field multiplier

Issue - State: closed - Opened by sgasilov over 5 years ago - 4 comments

#84 - Phaseretrieval

Pull Request - State: closed - Opened by tfarago over 5 years ago - 1 comment

#82 - Add BigTiff support

Pull Request - State: closed - Opened by tfarago over 5 years ago

#81 - Normalize projection intensity based on subregion

Issue - State: closed - Opened by tfarago over 5 years ago
Labels: enhancement

#80 - Add output-bytes-per-file option

Pull Request - State: closed - Opened by tfarago almost 6 years ago

#79 - tofu reco with flat-field correction on multiple devices

Issue - State: closed - Opened by xeiwoka about 6 years ago - 16 comments

#78 - Bug: tofu tomo bit-depth inverts contrast?

Issue - State: closed - Opened by sgasilov about 6 years ago - 1 comment

#77 - Add units to arguments

Pull Request - State: open - Opened by tfarago over 6 years ago - 3 comments
Labels: enhancement

#76 - Fix #64 fix #75

Pull Request - State: closed - Opened by tfarago over 6 years ago - 11 comments

#75 - Just turn off reco.conf functionality please

Issue - State: closed - Opened by sgasilov over 6 years ago - 2 comments

#74 - seg fault !

Issue - State: closed - Opened by sgasilov almost 7 years ago - 4 comments

#73 - [WIP] Fix TIE phase retrieval

Pull Request - State: closed - Opened by tfarago almost 7 years ago - 6 comments

#72 - What to do with reco.conf?

Issue - State: open - Opened by tfarago almost 7 years ago - 19 comments
Labels: question

#71 - very confused: absorptivity is always True

Issue - State: closed - Opened by sgasilov almost 7 years ago - 16 comments

#70 - Optimize search of the rotation axis

Issue - State: closed - Opened by sgasilov almost 7 years ago - 3 comments

#69 - Optimizing the TIE phase-retrieval

Issue - State: closed - Opened by sgasilov almost 7 years ago - 11 comments

#68 - provide image norms in preprocess

Issue - State: closed - Opened by lucito almost 7 years ago - 1 comment

#67 - provide more flexibility in flat-field-correct

Issue - State: closed - Opened by lucito almost 7 years ago - 4 comments

#66 - Add reco

Pull Request - State: closed - Opened by tfarago almost 7 years ago - 1 comment

#65 - Preprocessing

Pull Request - State: closed - Opened by tfarago almost 7 years ago - 1 comment

#64 - Fix reco.conf feature

Issue - State: closed - Opened by sgasilov about 7 years ago - 1 comment

#63 - Extend lamino

Pull Request - State: closed - Opened by tfarago almost 8 years ago - 2 comments

#62 - Clean up gui

Pull Request - State: closed - Opened by MariaMatveeva about 8 years ago

#61 - Fix #60: Fix projections flag

Pull Request - State: closed - Opened by MariaMatveeva about 8 years ago

#60 - tofu gui doesn't work from projections

Issue - State: closed - Opened by tfarago about 8 years ago
Labels: bug

#59 - Wrong image dimensions with multi-tif sinograms

Issue - State: closed - Opened by MarcusZuber over 8 years ago - 1 comment
Labels: bug

#58 - tofu sinos: reconstructing sinograms from data acquired over 360 degress rotation

Issue - State: closed - Opened by VeneraW over 8 years ago - 5 comments

#57 - tofu init: create configuration file with the user specified name

Issue - State: closed - Opened by VeneraW over 8 years ago - 2 comments

#56 - Graph creation needs to be more flexible

Issue - State: open - Opened by tfarago over 8 years ago - 1 comment
Labels: enhancement, question

#55 - Make logging work

Pull Request - State: closed - Opened by tfarago over 8 years ago - 1 comment

#54 - lamino: Update lamino task name

Pull Request - State: closed - Opened by tfarago over 8 years ago

#53 - New lamino

Pull Request - State: closed - Opened by tfarago over 8 years ago - 4 comments

#52 - Distribute a single tofu script only

Pull Request - State: closed - Opened by matze over 8 years ago - 2 comments

#51 - Reconstruction Doesn't Work

Issue - State: closed - Opened by tfarago almost 9 years ago - 3 comments
Labels: bug

#50 - Rename ufo-* tools

Issue - State: closed - Opened by matze almost 9 years ago - 1 comment
Labels: question

#49 - We need to specify the file patterns

Issue - State: closed - Opened by tfarago almost 9 years ago - 2 comments
Labels: question

#48 - Conflicting angle and number of angles options

Issue - State: closed - Opened by tfarago almost 9 years ago - 1 comment
Labels: question

#47 - Verbosity level doesn't do anything

Issue - State: closed - Opened by tfarago almost 9 years ago
Labels: bug

#46 - Too many options for submodules

Issue - State: closed - Opened by tfarago almost 9 years ago - 1 comment
Labels: bug

#45 - Default values are not printed on --help

Issue - State: closed - Opened by tfarago almost 9 years ago
Labels: bug

#44 - Cannot generate data for reconstruction

Issue - State: closed - Opened by tfarago almost 9 years ago
Labels: bug

#43 - Add ramp-fromreal

Pull Request - State: closed - Opened by tfarago almost 9 years ago - 1 comment

#42 - Add interactive mode

Issue - State: closed - Opened by matze almost 9 years ago - 2 comments
Labels: enhancement

#41 - Cannot properly use raw files

Issue - State: closed - Opened by matze about 9 years ago
Labels: bug

#40 - Speed up sinogram generation with *very* large data

Issue - State: closed - Opened by matze about 9 years ago - 1 comment
Labels: enhancement

#39 - Let ufo-perf use the reco module

Issue - State: closed - Opened by matze over 9 years ago - 2 comments
Labels: enhancement

#38 - Check if there are enough arguments on cmd

Pull Request - State: closed - Opened by tfarago over 9 years ago - 1 comment

#37 - Second reconstruction fails with GUI because of missing remotes

Issue - State: closed - Opened by matze over 9 years ago
Labels: bug