Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / tzok/rnapolis-py issues and pull requests

#144 - build: bump orjson from 3.9.12 to 3.9.13

Pull Request - State: closed - Opened by dependabot[bot] 9 months ago
Labels: dependencies, python

#143 - feat: use ThreadPoolExecutor to speed up running cmsearch

Pull Request - State: closed - Opened by tzok 10 months ago

#142 - build: bump hypothesis from 6.93.0 to 6.97.1

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago - 2 comments
Labels: dependencies, python

#141 - build: bump orjson from 3.9.10 to 3.9.12

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies, python

#140 - build: bump hypothesis from 6.93.0 to 6.96.2

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago - 1 comment
Labels: dependencies, python

#139 - build: bump mmcif from 0.84 to 0.85.1

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies, python

#138 - build: bump scipy from 1.11.4 to 1.12.0

Pull Request - State: closed - Opened by dependabot[bot] 10 months ago
Labels: dependencies, python

#133 - build: bump hypothesis from 6.92.1 to 6.92.2

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies, python

#132 - build: bump mmcif from 0.82 to 0.83

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies, python

#131 - fix: handle lowercase and DNA sequences

Pull Request - State: closed - Opened by tzok 11 months ago

#130 - chore: set version to 0.3.1

Pull Request - State: closed - Opened by tzok 11 months ago

#129 - feat: add rfam-folder CLI tool

Pull Request - State: closed - Opened by tzok 11 months ago

#128 - build: bump hypothesis from 6.92.0 to 6.92.1

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies, python

#127 - build: bump actions/setup-python from 4 to 5

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago - 1 comment
Labels: dependencies, github_actions

#126 - build: bump mmcif from 0.81 to 0.82

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies, python

#125 - build: bump hypothesis from 6.91.0 to 6.92.0

Pull Request - State: closed - Opened by dependabot[bot] 11 months ago
Labels: dependencies, python

#124 - build: bump hypothesis from 6.90.0 to 6.91.0

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies, python

#123 - build: bump hypothesis from 6.89.1 to 6.90.0

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies, python

#122 - feat: add molecule filter

Pull Request - State: closed - Opened by tzok 12 months ago

#121 - build: bump scipy from 1.11.3 to 1.11.4

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies, python

#120 - build: bump hypothesis from 6.88.3 to 6.89.1

Pull Request - State: closed - Opened by dependabot[bot] 12 months ago
Labels: dependencies, python

#119 - build: bump numpy from 1.26.1 to 1.26.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#118 - feat: decompose secondary structure extraction into two steps

Pull Request - State: closed - Opened by tzok about 1 year ago

#117 - release: 0.1.5

Pull Request - State: closed - Opened by tzok about 1 year ago

#115 - build: bump hypothesis from 6.88.1 to 6.88.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#114 - build: bump orjson from 3.9.9 to 3.9.10

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#113 - build: bump hypothesis from 6.88.0 to 6.88.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#112 - build: bump numpy from 1.26.0 to 1.26.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#111 - build: bump hypothesis from 6.87.3 to 6.88.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#110 - build: bump orjson from 3.9.7 to 3.9.9

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#109 - build: bump hypothesis from 6.87.1 to 6.87.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#108 - build: bump scipy from 1.11.2 to 1.11.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#107 - build: bump hypothesis from 6.87.0 to 6.87.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#106 - build: bump hypothesis from 6.86.1 to 6.87.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#105 - Enquiry about extract_secondary_structure

Issue - State: closed - Opened by GRAPH-0 about 1 year ago - 2 comments

#104 - build: bump numpy from 1.25.2 to 1.26.0

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#103 - build: bump hypothesis from 6.84.3 to 6.86.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#102 - build: bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 1 comment
Labels: dependencies, github_actions

#101 - build: bump orjson from 3.9.5 to 3.9.7

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#100 - build: bump hypothesis from 6.83.1 to 6.84.3

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#99 - build: bump hypothesis from 6.82.6 to 6.83.1

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#98 - build: bump scipy from 1.11.1 to 1.11.2

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#97 - build: bump orjson from 3.9.4 to 3.9.5

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#96 - build: bump hypothesis from 6.82.4 to 6.82.6

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago
Labels: dependencies, python

#95 - feat: check if nucleobase has all atoms

Pull Request - State: closed - Opened by tzok about 1 year ago

#94 - build: bump hypothesis from 6.82.2 to 6.82.4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#93 - build: bump orjson from 3.9.3 to 3.9.4

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#92 - build: bump orjson from 3.9.2 to 3.9.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#91 - build: bump hypothesis from 6.82.0 to 6.82.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#90 - build: bump numpy from 1.25.1 to 1.25.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#89 - release: 0.1.3

Pull Request - State: closed - Opened by tzok over 1 year ago

#88 - release version 0.1.2

Pull Request - State: closed - Opened by tzok over 1 year ago

#87 - feat: create BpSeq from string

Pull Request - State: closed - Opened by tzok over 1 year ago

#86 - build: bump hypothesis from 6.81.2 to 6.82.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#85 - build: bump hypothesis from 6.80.1 to 6.81.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#84 - build: bump hypothesis from 6.80.0 to 6.80.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#83 - build: bump numpy from 1.25.0 to 1.25.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#82 - build: bump orjson from 3.9.1 to 3.9.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#81 - build: bump scipy from 1.11.0 to 1.11.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#80 - build: bump hypothesis from 6.79.2 to 6.80.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#79 - build: bump hypothesis from 6.79.1 to 6.79.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#78 - build: bump scipy from 1.10.1 to 1.11.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#77 - build: bump hypothesis from 6.78.1 to 6.79.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#76 - build: bump numpy from 1.24.3 to 1.25.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#75 - build: bump hypothesis from 6.76.0 to 6.78.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#74 - build: bump orjson from 3.9.0 to 3.9.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#73 - build: bump hypothesis from 6.75.6 to 6.76.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#72 - build: bump orjson from 3.8.14 to 3.9.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#71 - build: bump hypothesis from 6.75.3 to 6.75.6

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#70 - build: bump orjson from 3.8.11 to 3.8.14

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#69 - build: bump hypothesis from 6.75.2 to 6.75.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#68 - build: bump orjson from 3.8.11 to 3.8.12

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#67 - build: bump hypothesis from 6.72.1 to 6.75.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#66 - build: bump orjson from 3.8.10 to 3.8.11

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#65 - build: bump hypothesis from 6.72.1 to 6.75.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#64 - build: bump numpy from 1.24.2 to 1.24.3

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#63 - build: bump hypothesis from 6.70.1 to 6.72.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago
Labels: dependencies, python

#62 - release: 0.1.1

Pull Request - State: closed - Opened by tzok over 1 year ago

#61 - build: bump hypothesis from 6.70.1 to 6.72.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 2 comments
Labels: dependencies, python

#60 - build: bump hypothesis from 6.70.1 to 6.71.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#59 - build: bump orjson from 3.8.9 to 3.8.10

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#58 - build: bump mmcif from 0.80.1 to 0.81

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#57 - release: 0.1.0

Pull Request - State: closed - Opened by tzok over 1 year ago

#56 - release: 0.0.16

Pull Request - State: closed - Opened by tzok over 1 year ago

#55 - feat: solve POA using MILP

Pull Request - State: closed - Opened by tzok over 1 year ago

#54 - feat: solve POA using MILP

Pull Request - State: closed - Opened by tzok over 1 year ago

#53 - feat: solve POA using MILP

Pull Request - State: closed - Opened by tzok over 1 year ago

#52 - build: bump hypothesis from 6.70.0 to 6.70.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#51 - build: bump orjson from 3.8.8 to 3.8.9

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#50 - release: 0.0.15

Pull Request - State: closed - Opened by tzok over 1 year ago

#49 - release: 0.0.15

Pull Request - State: closed - Opened by tzok over 1 year ago

#48 - feat: add motif detection

Pull Request - State: closed - Opened by tzok over 1 year ago

#47 - build: bump orjson from 3.8.6 to 3.8.8

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#46 - build: bump hypothesis from 6.68.2 to 6.70.0

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#45 - build: bump orjson from 3.8.6 to 3.8.7

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#44 - build: bump hypothesis from 6.67.1 to 6.68.2

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 1 comment
Labels: dependencies, python

#43 - build: bump scipy from 1.10.0 to 1.10.1

Pull Request - State: closed - Opened by dependabot[bot] over 1 year ago - 3 comments
Labels: dependencies, python

#42 - build: bump orjson from 3.8.5 to 3.8.6

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies, python

#41 - build: bump hypothesis from 6.67.1 to 6.68.1

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies, python