trias-project/trias issues and pull requests

#110 - rewrite code avoiding using sp and rworldmap

Issue - State: open - Opened by damianooldoni 10 months ago - 1 comment

#109 - Improve contributors

Pull Request - State: closed - Opened by damianooldoni 10 months ago - 1 comment

#108 - Use releases

Issue - State: closed - Opened by damianooldoni 12 months ago - 2 comments

#107 - Trying to run climate matching script

Issue - State: closed - Opened by arnaudjacobs about 1 year ago - 3 comments

#106 - Improve indicator_native_range_year()

Pull Request - State: closed - Opened by damianooldoni over 1 year ago

#105 - Set x-axis as factor in `indicator_native_range_year()`

Issue - State: closed - Opened by damianooldoni over 1 year ago - 1 comment
Labels: bug

#104 - Improve annotation GAM plots

Pull Request - State: closed - Opened by damianooldoni over 1 year ago

#103 - Improve annotation when GAM cannot assess emerging status

Issue - State: closed - Opened by damianooldoni over 1 year ago - 4 comments
Labels: enhancement

#102 - Remove use of deprecated or superseded functions throughout the package

Issue - State: open - Opened by damianooldoni over 1 year ago

#101 - Fix order of bins

Pull Request - State: closed - Opened by damianooldoni over 1 year ago

#100 - Order of year bins in `visualize_pathways_year_level1`

Issue - State: closed - Opened by mvarewyck over 1 year ago - 1 comment
Labels: bug

#99 - Improve message on plot

Issue - State: closed - Opened by damianooldoni about 2 years ago - 1 comment
Labels: enhancement

#98 - Add details GAM en decision rules methods

Issue - State: closed - Opened by damianooldoni about 2 years ago - 1 comment
Labels: documentation

#97 - Improve doc `apply_gam()` and `apply_decision_rules()`

Pull Request - State: closed - Opened by damianooldoni about 2 years ago

#96 - Solve 91

Pull Request - State: closed - Opened by damianooldoni about 2 years ago - 1 comment

#94 - 93 errors while running climate matching

Pull Request - State: closed - Opened by SanderDevisscher about 2 years ago - 3 comments

#93 - Errors while running climate matching

Issue - State: closed - Opened by SanderDevisscher about 2 years ago - 3 comments
Labels: bug

#92 - Solve failures automatic tests

Issue - State: closed - Opened by damianooldoni about 2 years ago - 1 comment
Labels: Unit-tests

#91 - Always return plot for apply_gam

Issue - State: closed - Opened by mvarewyck about 2 years ago - 1 comment
Labels: enhancement

#90 - Add RIPARIAS as 2nd funder

Pull Request - State: closed - Opened by peterdesmet about 2 years ago

#89 - Update funding info and website

Pull Request - State: closed - Opened by peterdesmet about 2 years ago

#88 - Fix 84

Pull Request - State: closed - Opened by damianooldoni over 2 years ago - 6 comments

#87 - Return data slots

Pull Request - State: closed - Opened by damianooldoni over 2 years ago - 7 comments

#86 - Adapt Roxygen documentation by using pkgname::func_name everywhere

Issue - State: open - Opened by damianooldoni over 2 years ago
Labels: documentation

#85 - Return not only a plot but also a dataframe for checklist related functions

Issue - State: closed - Opened by damianooldoni over 2 years ago - 1 comment

#84 - Return dataframe used for graph

Issue - State: closed - Opened by SanderDevisscher over 2 years ago - 12 comments
Labels: enhancement

#83 - Add vignette about climate match function

Issue - State: open - Opened by damianooldoni over 2 years ago
Labels: enhancement

#82 - Write unit-tests for climate match function

Issue - State: open - Opened by damianooldoni over 2 years ago
Labels: Unit-tests

#81 - Refactor climate match function: use help-subfunctions

Issue - State: open - Opened by damianooldoni over 2 years ago

#80 - Consistent use of snake case for function arguments

Issue - State: open - Opened by damianooldoni over 2 years ago

#79 - Replace deprecated arg readr

Pull Request - State: closed - Opened by damianooldoni over 2 years ago - 1 comment

#78 - Better cartographic image of climate zones at risk of invasion

Issue - State: open - Opened by SanderDevisscher about 3 years ago - 1 comment
Labels: enhancement

#77 - 73 climate matching function

Pull Request - State: closed - Opened by SanderDevisscher about 3 years ago - 20 comments

#76 - Expand climate matching function to use additional datasources

Issue - State: closed - Opened by SanderDevisscher about 3 years ago
Labels: enhancement

#75 - Expand climate matching function to display native ranges

Issue - State: closed - Opened by SanderDevisscher about 3 years ago
Labels: enhancement

#74 - Expand climate matching function with single species maps

Issue - State: closed - Opened by SanderDevisscher about 3 years ago - 2 comments
Labels: enhancement

#73 - create function for climate matching

Issue - State: closed - Opened by timadriaens over 3 years ago - 50 comments

#72 - Solve #71

Pull Request - State: closed - Opened by damianooldoni over 3 years ago - 1 comment

#71 - verify_taxa: error

Issue - State: closed - Opened by peterdesmet over 3 years ago - 4 comments
Labels: bug

#70 - Add badges based on copy paste message returned by usethis

Pull Request - State: closed - Opened by damianooldoni over 3 years ago - 1 comment

#69 - Work more with GitHub actions

Pull Request - State: closed - Opened by damianooldoni over 3 years ago

#68 - Update actions and add test for update_downlload_list()

Pull Request - State: closed - Opened by damianooldoni over 3 years ago

#67 - Maintenance add GitHub actions

Pull Request - State: closed - Opened by damianooldoni over 3 years ago - 2 comments

#66 - Error when using Trias to create new Indicators

Issue - State: closed - Opened by SanderDevisscher over 3 years ago - 1 comment
Labels: bug

#65 - Add indicator native range year

Pull Request - State: closed - Opened by SanderDevisscher about 4 years ago - 6 comments

#64 - add_indicator_native_range_year function

Issue - State: open - Opened by SanderDevisscher over 4 years ago - 11 comments
Labels: enhancement

#63 - Improve output of pathway_visualize_* functions when no data

Pull Request - State: closed - Opened by damianooldoni over 4 years ago - 1 comment

#62 - Solve bug visualize pathway getting empty df

Pull Request - State: closed - Opened by damianooldoni over 4 years ago

#61 - Patch to solve bug in pathwaycbd

Pull Request - State: closed - Opened by damianooldoni over 4 years ago

#60 - Add functions for pathways visualization

Pull Request - State: closed - Opened by damianooldoni over 4 years ago

#59 - Write functions for pathways graphs

Issue - State: closed - Opened by damianooldoni over 4 years ago - 1 comment

#58 - Count distinct taxa

Pull Request - State: closed - Opened by damianooldoni over 4 years ago

#57 - Number of introduced taxa in graphs is way larger than expected

Issue - State: closed - Opened by damianooldoni over 4 years ago
Labels: bug

#56 - Fix #55

Pull Request - State: closed - Opened by damianooldoni over 4 years ago

#55 - error produced by indicator_total_year()

Issue - State: closed - Opened by eadriaensen over 4 years ago - 1 comment

#54 - Write tests for indicator_* functions

Issue - State: closed - Opened by damianooldoni over 4 years ago
Labels: enhancement

#53 - Add functions occurrence indicators

Pull Request - State: closed - Opened by damianooldoni over 4 years ago - 1 comment

#52 - Check correctness GAM output

Issue - State: open - Opened by damianooldoni almost 5 years ago - 1 comment
Labels: bug

#51 - Add functions for occurrence indicators

Issue - State: closed - Opened by damianooldoni almost 5 years ago - 1 comment

#50 - Failed to install 'trias' from GitHub

Issue - State: closed - Opened by qgroom almost 5 years ago - 3 comments

#49 - Adding codecov report for PRs

Pull Request - State: closed - Opened by damianooldoni almost 5 years ago

#48 - Update documentation indicator_total_year

Pull Request - State: closed - Opened by damianooldoni almost 5 years ago

#47 - Improve style remove distinct in graph functions

Pull Request - State: closed - Opened by damianooldoni almost 5 years ago

#46 - 45 enable custom axis titles

Pull Request - State: closed - Opened by SanderDevisscher about 5 years ago
Labels: enhancement

#45 - Enable custom axis labs for indicators

Issue - State: closed - Opened by SanderDevisscher about 5 years ago - 4 comments
Labels: enhancement

#44 - Solve bug not chordata

Pull Request - State: closed - Opened by damianooldoni over 5 years ago

#43 - Improve get pathways

Pull Request - State: closed - Opened by damianooldoni over 5 years ago

#42 - Add temporal cut-off param in get_table_pathway function

Issue - State: closed - Opened by damianooldoni over 5 years ago - 1 comment

#41 - Add habitat to valid facets

Pull Request - State: closed - Opened by damianooldoni over 5 years ago - 1 comment

#40 - Update gbif_has_distribution() to allow NOT filters

Issue - State: closed - Opened by peterdesmet over 5 years ago - 2 comments

#39 - verify_taxa: also verify genus and infraspecific taxa

Issue - State: open - Opened by peterdesmet over 5 years ago - 1 comment
Labels: enhancement

#38 - Add pkgdown

Pull Request - State: closed - Opened by damianooldoni over 5 years ago

#37 - Update NAMESPACE

Pull Request - State: closed - Opened by damianooldoni over 5 years ago

#36 - Add function for checklist indicator

Pull Request - State: closed - Opened by damianooldoni over 5 years ago

#35 - Add default params verify taxa

Pull Request - State: closed - Opened by damianooldoni over 5 years ago - 1 comment

#34 - problems with installation of trias package

Issue - State: closed - Opened by LienReyserhove over 5 years ago - 1 comment

#33 - Add option to specify column names for input dfs of verify_taxa

Issue - State: closed - Opened by damianooldoni over 5 years ago - 1 comment
Labels: enhancement

#32 - Improve verify taxa

Pull Request - State: closed - Opened by damianooldoni almost 6 years ago - 5 comments

#31 - Included verifiedBy column after remarks

Issue - State: closed - Opened by peterdesmet almost 6 years ago - 4 comments
Labels: enhancement

#30 - Verify taxa: return correct taxa df if input already contains verificationKey

Issue - State: closed - Opened by peterdesmet almost 6 years ago - 9 comments

#29 - Verify taxa: ungroup() info$duplicates

Issue - State: closed - Opened by peterdesmet almost 6 years ago - 3 comments

#28 - Verify taxa: split info$outdated_taxa in two df

Issue - State: closed - Opened by peterdesmet almost 6 years ago - 6 comments

#27 - Order of the taxa returned by verify_taxa()

Issue - State: closed - Opened by damianooldoni almost 6 years ago - 3 comments

#26 - What ancillary df duplicates_taxa should contain?

Issue - State: closed - Opened by damianooldoni almost 6 years ago - 3 comments

#25 - Specify type columns occurrence data beforehand

Issue - State: open - Opened by damianooldoni almost 6 years ago - 4 comments

#24 - How verify_taxa() handles taxa which don't need manual verification

Issue - State: closed - Opened by damianooldoni almost 6 years ago - 4 comments

#23 - How to manage changes of synonym in verify_taxa()

Issue - State: closed - Opened by damianooldoni almost 6 years ago - 3 comments

#22 - Issues returned as codes by name_usage()

Issue - State: closed - Opened by damianooldoni almost 6 years ago - 4 comments

#21 - Adapt verify_taxa()

Pull Request - State: closed - Opened by damianooldoni almost 6 years ago - 6 comments

#20 - Error when filtering data for indicator_total_year

Issue - State: closed - Opened by SanderDevisscher about 6 years ago - 3 comments
Labels: bug

#19 - R CMD check returns 2 errors

Pull Request - State: closed - Opened by peterdesmet over 6 years ago - 5 comments

#18 - Update link to geom_smooth for loess explanation

Pull Request - State: closed - Opened by Yasmine-Verzelen over 6 years ago

#17 - Spread with duplicates

Pull Request - State: closed - Opened by damianooldoni over 6 years ago - 13 comments

#16 - Add function spread_with_duplicates

Issue - State: closed - Opened by peterdesmet over 6 years ago - 4 comments

#15 - Add gbif verify synonyms

Pull Request - State: closed - Opened by damianooldoni over 6 years ago - 8 comments

#14 - Add origin

Pull Request - State: closed - Opened by damianooldoni over 6 years ago - 2 comments

#13 - Remove country from tsv

Pull Request - State: closed - Opened by damianooldoni over 6 years ago

#12 - rename functions in documentation via devtools::document()

Pull Request - State: closed - Opened by damianooldoni over 6 years ago

#11 - Rename functions get_taxa() and has_distribution()

Pull Request - State: closed - Opened by damianooldoni over 6 years ago

#10 - Drop input_country from update_download_list + parse DOI

Issue - State: closed - Opened by peterdesmet over 6 years ago - 5 comments
Labels: enhancement

GitHub / trias-project/trias issues and pull requests