Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / traitecoevo/traits.build issues and pull requests

#145 - Move duplicate functions

Pull Request - State: open - Opened by yangsophieee 10 months ago - 2 comments

#144 - Combined table output

Pull Request - State: open - Opened by ehwenk 10 months ago - 4 comments

#143 - Add dataset tests

Pull Request - State: closed - Opened by yangsophieee 10 months ago - 1 comment

#142 - Hex sticker

Pull Request - State: closed - Opened by ehwenk 10 months ago

#141 - Add test for checking units in metadata are correct/in the `unit_conversions` file

Issue - State: closed - Opened by yangsophieee 10 months ago - 1 comment
Labels: dataset test

#140 - Generalising dataset reports while allowing customisation for specific databases

Issue - State: open - Opened by yangsophieee 10 months ago
Labels: generalising

#139 - Update `taxon_list.csv` in tests

Pull Request - State: closed - Opened by yangsophieee 10 months ago

#138 - Update report_dataset.Rmd

Pull Request - State: closed - Opened by ehwenk 10 months ago

#137 - Better options for checking data quality

Issue - State: open - Opened by ehwenk 10 months ago - 1 comment

#136 - Release 1.01

Pull Request - State: closed - Opened by dfalster 11 months ago

#135 - Release version 1.0.1

Pull Request - State: closed - Opened by dfalster 11 months ago

#134 - Update testdata.R

Pull Request - State: closed - Opened by ehwenk 11 months ago

#133 - False positivies with `dataset_test`

Issue - State: closed - Opened by ehwenk 11 months ago - 6 comments

#132 - More dataset tests

Pull Request - State: closed - Opened by yangsophieee 11 months ago

#131 - Duplicated tests between `dataset_test` and `tests`

Issue - State: open - Opened by ehwenk 11 months ago

#130 - Fix `plot_trait_distribution_beeswarm` error

Pull Request - State: closed - Opened by yangsophieee 11 months ago

#128 - error in `plot_trait_distribution_beeswarm` - reports won't build

Issue - State: closed - Opened by ehwenk 11 months ago
Labels: bug

#127 - rename function `build_update_taxonomy`

Pull Request - State: closed - Opened by ehwenk 11 months ago

#126 - More version info on build

Pull Request - State: closed - Opened by dfalster 11 months ago - 4 comments

#125 - Collapse duplicate categorical values within a row

Pull Request - State: closed - Opened by yangsophieee 11 months ago - 1 comment

#124 - embed traits.build version in database `config/metadata.yml` file

Issue - State: closed - Opened by ehwenk 11 months ago - 3 comments

#122 - fix rcmdcheck issues

Pull Request - State: closed - Opened by dfalster 11 months ago

#121 - Remove dependency on austraits by importing plot

Pull Request - State: closed - Opened by dfalster 11 months ago - 4 comments

#119 - Taxonomic updates fixes

Pull Request - State: closed - Opened by ehwenk 11 months ago

#117 - `dataset_id` field in `taxonomic_updates` table is incorrect

Issue - State: closed - Opened by ehwenk 11 months ago - 1 comment
Labels: bug

#116 - Excluded observations fix

Pull Request - State: closed - Opened by ehwenk 11 months ago

#115 - taxon_names excluded in `exclude_obesrvations` appearing in taxonomic_updates and taxa tables

Issue - State: closed - Opened by ehwenk 11 months ago - 1 comment
Labels: bug

#114 - rename fields

Pull Request - State: closed - Opened by ehwenk 11 months ago - 1 comment

#113 - Update taxonomic_updates functions

Pull Request - State: closed - Opened by ehwenk 11 months ago

#112 - `exclude_observations` does not allow trait values to be excluded

Issue - State: closed - Opened by yangsophieee 11 months ago - 1 comment

#111 - Taxonomy documention & edits

Pull Request - State: closed - Opened by ehwenk 11 months ago

#109 - Improve `dataset_test` failure messages

Pull Request - State: closed - Opened by yangsophieee 11 months ago

#108 - Update report_dataset.Rmd

Pull Request - State: closed - Opened by ehwenk 11 months ago - 1 comment

#107 - Omit trait table columns that are all NA's?

Issue - State: open - Opened by ehwenk 11 months ago
Labels: generalising, on hold

#106 - Add function for identifying duplicates preventing pivot wider

Pull Request - State: closed - Opened by yangsophieee 12 months ago - 1 comment

#105 - Create a hex sticker

Issue - State: open - Opened by dfalster 12 months ago - 1 comment

#103 - Create test for blank datasets

Pull Request - State: closed - Opened by yangsophieee 12 months ago - 1 comment

#102 - Generalised database and target names

Pull Request - State: closed - Opened by yangsophieee 12 months ago - 1 comment

#101 - Reports not building

Issue - State: closed - Opened by ehwenk 12 months ago - 3 comments
Labels: bug

#100 - Fix unit conversions warning

Pull Request - State: closed - Opened by yangsophieee 12 months ago - 6 comments

#99 - Check precedences of metadata

Pull Request - State: closed - Opened by yangsophieee 12 months ago - 2 comments

#98 - APCalign vs traits.build differences - for discussion

Issue - State: closed - Opened by ehwenk 12 months ago - 4 comments
Labels: enhancement, question, generalising

#97 - Fix error with exclusions (#96)

Pull Request - State: closed - Opened by dfalster 12 months ago

#96 - `exclude_observations` field not working

Issue - State: closed - Opened by ehwenk 12 months ago - 4 comments
Labels: bug

#95 - Add `collection_date` and `original_name` to `observation_id`

Pull Request - State: closed - Opened by yangsophieee 12 months ago

#93 - Make `austraits` package functions part of workflow or testing

Issue - State: closed - Opened by yangsophieee 12 months ago - 3 comments
Labels: dataset test

#92 - Solving minor issues

Pull Request - State: closed - Opened by yangsophieee 12 months ago

#91 - Update vignettes and create website

Pull Request - State: closed - Opened by dfalster 12 months ago

#90 - Add `collection_date` to variables that make `observation_id`?

Issue - State: closed - Opened by yangsophieee 12 months ago - 2 comments

#89 - Add test for `collection_date` following `custom_R_code`

Pull Request - State: closed - Opened by yangsophieee 12 months ago

#88 - Fix time data types in contexts getting reformatted

Pull Request - State: closed - Opened by yangsophieee 12 months ago - 1 comment

#87 - Add "time" category of traits, in addition to "categorical" and "numeric"?

Issue - State: open - Opened by yangsophieee 12 months ago - 1 comment
Labels: enhancement, on hold

#86 - Make columns have true NAs instead of string "NA"

Pull Request - State: closed - Opened by yangsophieee 12 months ago - 2 comments

#85 - Check `location_id`'s are NA for species entities

Pull Request - State: closed - Opened by yangsophieee 12 months ago - 2 comments

#84 - Add `repeat_measurements_id`

Pull Request - State: closed - Opened by yangsophieee 12 months ago - 1 comment

#82 - Update `furrr` pipeline

Pull Request - State: closed - Opened by yangsophieee about 1 year ago

#81 - Fix processing of data in `dataset_test`

Pull Request - State: closed - Opened by yangsophieee about 1 year ago

#80 - Fix error messages

Pull Request - State: closed - Opened by yangsophieee about 1 year ago

#79 - change austraits_curators to dataset_curators

Pull Request - State: closed - Opened by ehwenk about 1 year ago

#78 - rename contexts to include work context

Pull Request - State: closed - Opened by ehwenk about 1 year ago

#77 - New vignettes

Pull Request - State: closed - Opened by ehwenk about 1 year ago - 1 comment

#76 - Update_pipeline

Pull Request - State: closed - Opened by dfalster about 1 year ago - 1 comment

#75 - Add dataset test to confirm all metadata context property values are in data.csv

Issue - State: closed - Opened by ehwenk about 1 year ago - 2 comments

#74 - Test for pivoting wider

Pull Request - State: closed - Opened by yangsophieee about 1 year ago

#73 - Update .gitignore to ignore export HTMLs and `build_info.md` files

Pull Request - State: closed - Opened by yangsophieee about 1 year ago - 1 comment

#72 - location_id should be NA's for all `entity_type: species`

Issue - State: closed - Opened by ehwenk about 1 year ago - 4 comments
Labels: bug

#71 - Should we include tests of build dataset in `dataset_test` ?

Issue - State: closed - Opened by ehwenk about 1 year ago - 3 comments
Labels: enhancement, dataset test

#70 - Collections of issues solved

Pull Request - State: closed - Opened by ehwenk about 1 year ago

#69 - Changes to units processing

Pull Request - State: closed - Opened by ehwenk about 1 year ago - 3 comments

#68 - Add a proper "repeat measurements id"

Issue - State: closed - Opened by ehwenk about 1 year ago - 2 comments

#67 - Update schema for reading in metadata from different sections

Issue - State: closed - Opened by yangsophieee about 1 year ago - 3 comments
Labels: bug

#65 - Warning during unit conversions

Issue - State: closed - Opened by ehwenk about 1 year ago - 18 comments
Labels: bug, question

#64 - Read metadata fields from column at trait level for long datasets

Pull Request - State: closed - Opened by yangsophieee about 1 year ago - 1 comment

#63 - Add `dataset_test` test for checking context metadata values are in the data

Issue - State: closed - Opened by yangsophieee about 1 year ago - 1 comment
Labels: dataset input, dataset test

#62 - Genus-level observations not appearing in the `traits` table

Issue - State: closed - Opened by yangsophieee about 1 year ago - 2 comments
Labels: bug

#61 - Edits to `metadata_add_locations`

Pull Request - State: closed - Opened by ehwenk about 1 year ago

#59 - Omits lists of values from contexts

Pull Request - State: closed - Opened by ehwenk about 1 year ago - 1 comment

#57 - Explore `value_type` errors

Issue - State: closed - Opened by ehwenk about 1 year ago - 2 comments

#56 - Rename `plot_id`, `temporal_id` and (maybe) `treatment_id`

Issue - State: closed - Opened by ehwenk about 1 year ago - 1 comment

#55 - Add test to `dataset_test` ensuring `collection_date` follows `custom_R_code`

Issue - State: closed - Opened by yangsophieee about 1 year ago - 1 comment
Labels: dataset input

#54 - Add test ensuring a dataset can pivot wider

Issue - State: closed - Opened by ehwenk about 1 year ago - 4 comments

#52 - Vignettes are not building because missing `figures/` folder

Issue - State: closed - Opened by yangsophieee about 1 year ago - 2 comments
Labels: bug, documentation

#51 - Fix ausinvertraits bug

Pull Request - State: closed - Opened by yangsophieee about 1 year ago

#50 - `metadata_add_contexts` should not write NAs to the context metadata

Issue - State: closed - Opened by yangsophieee about 1 year ago
Labels: dataset input, quick

#49 - Time data types get reformatted with `read_csv`

Issue - State: open - Opened by yangsophieee about 1 year ago - 5 comments
Labels: bug, dataset input, quick

#48 - How do you suppress default failure messages from `expect_` functions?

Issue - State: closed - Opened by yangsophieee about 1 year ago - 4 comments
Labels: question, dataset input, dataset test

#47 - Testing for `dataset_test`

Issue - State: open - Opened by yangsophieee about 1 year ago
Labels: dataset input, dataset test