Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / totajuliusd/topr issues and pull requests

#86 - Mark target SNP in locuszoomplot

Issue - State: closed - Opened by paulandroide 4 months ago - 2 comments

#85 - gitIgnore additions and spellcheck

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#84 - logo for topr!

Pull Request - State: closed - Opened by kscott-1 4 months ago

#83 - Vignette updates

Pull Request - State: closed - Opened by kscott-1 4 months ago - 1 comment

#82 - print removal

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#81 - still allow for sparser/denser annotations with region

Pull Request - State: closed - Opened by kscott-1 4 months ago - 1 comment

#80 - run devtools::document() before CRAN rel

Pull Request - State: closed - Opened by kscott-1 4 months ago - 1 comment

#78 - follow [packageName version] title format for NEWS.md

Pull Request - State: closed - Opened by kscott-1 4 months ago

#77 - Cleanup

Pull Request - State: closed - Opened by kscott-1 4 months ago

#76 - REAMDE

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#75 - vline_size fix and updated README

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#74 - Merge pull request #73 from totajuliusd/master

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#73 - downsampling

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#72 - manhattanExtra

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#71 - tiny README fix

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#70 - Updated README

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#69 - vline_color fixed

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#68 - allow for missing R2 values in locuszoom

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#67 - color added

Pull Request - State: closed - Opened by totajuliusd 4 months ago

#65 - get_lead_snps region_size parameter

Issue - State: closed - Opened by kscott-1 5 months ago - 1 comment

#64 - locuszoom issues

Issue - State: closed - Opened by mvab 6 months ago - 2 comments

#63 - Change color of datasets in Manhattan/region plot

Issue - State: closed - Opened by zara03 6 months ago - 4 comments

#62 - Colocalization plot

Issue - State: open - Opened by sahirbhatnagar 6 months ago - 1 comment

#61 - Missing R2 values

Issue - State: closed - Opened by frahimov 7 months ago - 3 comments

#59 - bug fix for legend labels

Pull Request - State: closed - Opened by totajuliusd 7 months ago

#58 - Region plot 'a' in the legend plot

Issue - State: closed - Opened by karpat90 7 months ago - 17 comments

#57 - webpage added

Pull Request - State: closed - Opened by totajuliusd 7 months ago

#56 - topr example page added

Pull Request - State: closed - Opened by totajuliusd 7 months ago

#55 - Fix annotation with log trans p

Pull Request - State: closed - Opened by totajuliusd 7 months ago

#54 - Fix annotation with log trans p

Pull Request - State: closed - Opened by totajuliusd 7 months ago

#53 - Multiple line thresholds on one manhattan plot

Issue - State: closed - Opened by hlnicholls 8 months ago - 2 comments

#52 - meta

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#51 - README update

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#50 - Manhattan subplots with known and novel color coding for both plots

Issue - State: closed - Opened by hlnicholls 8 months ago - 8 comments

#49 - news

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#48 - Can users specify REF/ALT allele column names for topr?

Issue - State: closed - Opened by jielab 8 months ago - 14 comments

#47 - Readme update

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#46 - Citation fix

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#45 - tiny fix

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#44 - topr v.2.0.0

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#43 - prerelease of topr v.2.0.0

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#42 - more readme

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#41 - code folding fixed?

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#40 - other species in README added

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#39 - update readme

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#38 - Other species and y and mt chr

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#37 - update docs

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#36 - Gene annotation from other species

Pull Request - State: closed - Opened by totajuliusd 8 months ago

#35 - Colour configuration in qqtopr

Issue - State: closed - Opened by ejade42 9 months ago - 2 comments

#34 - Multiple plots in a for loop

Issue - State: closed - Opened by hlnicholls 9 months ago - 2 comments

#33 - Chromosome numbers being dropped from X-axis

Issue - State: closed - Opened by rstubbins 9 months ago - 3 comments

#32 - Inconsistent number of exons being plotted

Issue - State: closed - Opened by sahirbhatnagar 10 months ago - 1 comment

#31 - Labels for Y chromosome, NA

Issue - State: closed - Opened by Hugo-Biolizard 10 months ago - 4 comments

#29 - Annotation source

Issue - State: closed - Opened by shudanhua about 1 year ago - 2 comments

#28 - annotate_with_nearest_gene()

Issue - State: closed - Opened by DM087 about 1 year ago - 1 comment

#27 - Version 1.1.10

Pull Request - State: closed - Opened by totajuliusd about 1 year ago

#26 - SNPs points can not fill the whole plot (I am plotting rice not human data)

Issue - State: closed - Opened by qj009 about 1 year ago - 6 comments

#25 - cran_sub

Pull Request - State: closed - Opened by totajuliusd about 1 year ago

#24 - updated cran-comments

Pull Request - State: closed - Opened by totajuliusd about 1 year ago

#23 - Version 1.1.9

Pull Request - State: closed - Opened by totajuliusd about 1 year ago

#22 - Non-human genomes.

Issue - State: open - Opened by Eugenia-L about 1 year ago - 4 comments

#21 - Color GWAS peaks

Issue - State: closed - Opened by bridgetrileygillis about 1 year ago - 2 comments

#20 - updated docs

Pull Request - State: closed - Opened by totajuliusd about 1 year ago

#19 - updated desc and news

Pull Request - State: closed - Opened by totajuliusd about 1 year ago

#18 - Version 1.8.8

Pull Request - State: closed - Opened by totajuliusd about 1 year ago

#17 - GRCh38 v GRCh37 in UKB

Issue - State: closed - Opened by asoroosh about 1 year ago - 2 comments

#16 - Plotting very small p-values

Issue - State: closed - Opened by eavalo about 1 year ago - 4 comments

#15 - saving plots

Issue - State: closed - Opened by zhannabalkhiyarova about 1 year ago - 7 comments

#14 - Coloured box missing on chr 22 when no chrX in data set

Issue - State: closed - Opened by amymariemason about 1 year ago - 2 comments

#13 - updated documentation

Pull Request - State: closed - Opened by totajuliusd over 1 year ago

#12 - Version 1.1.7

Pull Request - State: closed - Opened by totajuliusd over 1 year ago

#11 - Add default values for get_exonplot_coords when there are no genes in the region

Pull Request - State: closed - Opened by jhchung over 1 year ago - 2 comments

#10 - updated docs

Pull Request - State: closed - Opened by totajuliusd over 1 year ago

#9 - updated documentation

Pull Request - State: closed - Opened by totajuliusd over 1 year ago

#8 - cran-comments

Pull Request - State: closed - Opened by totajuliusd over 1 year ago

#7 - Start of version v115

Pull Request - State: closed - Opened by totajuliusd over 1 year ago

#6 - Start of v114

Pull Request - State: closed - Opened by totajuliusd over 1 year ago

#5 - updated README

Pull Request - State: closed - Opened by totajuliusd over 1 year ago

#4 - doc included

Pull Request - State: closed - Opened by totajuliusd over 1 year ago

#3 - Fix/replace with length

Pull Request - State: closed - Opened by totajuliusd over 1 year ago

#2 - Only try renaming if >0 columns are selected

Pull Request - State: closed - Opened by DavisVaughan almost 2 years ago

#1 - Genome build?

Issue - State: closed - Opened by PDRohde over 2 years ago - 5 comments