Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / tomasstolker/species issues and pull requests

#113 - Make the reported luminosity be the luminosity only of the atmosphere

Issue - State: open - Opened by gabrielastro 7 days ago - 1 comment
Labels: enhancement

#112 - In FitModel: lower limit for disk_teff mysteriously changes to 100 K?

Issue - State: closed - Opened by gabrielastro 7 days ago - 3 comments
Labels: question

#111 - small bugfix in setup_retrieval without spectra

Pull Request - State: closed - Opened by wbalmer 8 days ago

#110 - Plotting Teff(t) with plot_cooling

Issue - State: open - Opened by gabrielastro 9 days ago - 4 comments
Labels: enhancement

#109 - Indicating model points on posterior corner plot

Issue - State: open - Opened by gabrielastro 22 days ago - 2 comments
Labels: enhancement, question

#108 - Flushing the print buffer when running MultiNest

Issue - State: open - Opened by gabrielastro about 1 month ago - 4 comments
Labels: wontfix

#104 - Units in plot_spectrum, upper limits, photometry off model wavelength range, magnitude conversion, and other small things

Issue - State: open - Opened by gabrielastro about 1 month ago - 2 comments
Labels: bug, enhancement, question

#103 - updated exo-rem grids with higher metallicities

Issue - State: open - Opened by wbalmer about 2 months ago - 1 comment
Labels: enhancement

#100 - Upper limits on photometric measurements?

Issue - State: open - Opened by wbalmer 4 months ago - 1 comment
Labels: question

#99 - Any in cloud params vs kzz bug

Pull Request - State: closed - Opened by wbalmer 5 months ago

#98 - Small fixes

Pull Request - State: closed - Opened by wbalmer 6 months ago - 2 comments

#97 - sonora elf-owl as successor to bobcat and cholla

Issue - State: closed - Opened by wbalmer 6 months ago - 26 comments
Labels: enhancement

#96 - Different fsed for cloud species in retrieval

Issue - State: closed - Opened by wbalmer 6 months ago - 4 comments
Labels: enhancement

#95 - pypi package version

Issue - State: closed - Opened by nenasedk 7 months ago - 1 comment
Labels: enhancement

#94 - wavelength / spectral spacing for exo-rem-highres grid

Issue - State: closed - Opened by wbalmer 7 months ago - 9 comments
Labels: bug

#93 - Using wavel_range with database.add_model()

Issue - State: closed - Opened by gabrielastro 7 months ago - 5 comments
Labels: bug, enhancement

#92 - Installation error: No matching distribution found for matplotlib~=3.8.0

Issue - State: closed - Opened by gabrielastro 7 months ago - 3 comments
Labels: question

#91 - Retrieval with radial velocity / rotational broadening vsini

Issue - State: closed - Opened by Tenivar 8 months ago - 2 comments
Labels: enhancement

#90 - Higher-order interpolation?

Issue - State: closed - Opened by gabrielastro 8 months ago - 3 comments
Labels: question

#89 - Running multinest or ultranest in parallel?

Issue - State: closed - Opened by gabrielastro 8 months ago - 11 comments
Labels: bug

#88 - Enhancing plot_spectrum a bit

Issue - State: closed - Opened by gabrielastro 8 months ago - 21 comments
Labels: enhancement, question

#87 - Fitting with nested sampling (UltraNest or MultiNest)

Issue - State: closed - Opened by gabrielastro 8 months ago - 4 comments
Labels: enhancement

#86 - Various small things

Issue - State: closed - Opened by gabrielastro 8 months ago - 7 comments
Labels: enhancement

#85 - Add AtmosphericRetrieval.run_dynesty

Pull Request - State: closed - Opened by wbalmer 8 months ago - 2 comments

#84 - Adding dynesty support (especially to retrievals)

Issue - State: closed - Opened by wbalmer 8 months ago - 8 comments
Labels: enhancement

#83 - Making unpacking/storing of atmospheric models more memory-efficient

Issue - State: closed - Opened by gabrielastro 8 months ago - 10 comments
Labels: enhancement, question

#82 - Add gradient pt parameterization from Zhang+23

Pull Request - State: closed - Opened by wbalmer 8 months ago - 9 comments

#81 - Database problem: OSError: Unable to open file (file is already open for read-only)

Issue - State: closed - Opened by gabrielastro 8 months ago - 4 comments
Labels: bug

#80 - database overview: list_models() and verbosity control?

Issue - State: closed - Opened by gabrielastro 8 months ago - 4 comments
Labels: enhancement

#79 - Tutorial "Fitting data with a grid of model spectra" (and a few other pages): small things

Issue - State: closed - Opened by gabrielastro 8 months ago - 5 comments
Labels: enhancement

#78 - Adding priors to corner plot output in plot_posterior

Issue - State: closed - Opened by gabrielastro 8 months ago - 12 comments
Labels: enhancement

#77 - Adding an arbitrary offset and scaling to atmospheric models

Issue - State: closed - Opened by gabrielastro 8 months ago - 16 comments
Labels: enhancement

#76 - FitModel including disk_teff and disk_radius: TypeCheckError

Issue - State: closed - Opened by gabrielastro 8 months ago - 6 comments
Labels: bug, good first issue

#75 - add companion data for GJ 758 B

Pull Request - State: closed - Opened by mperrin 9 months ago - 1 comment

#74 - BT-NextGen (or similar stellar model) with Fe/H < 0?

Issue - State: closed - Opened by wbalmer 11 months ago - 14 comments
Labels: enhancement

#72 - BEX Exoplanet Grids

Issue - State: closed - Opened by maxwellmb about 1 year ago - 3 comments
Labels: enhancement

#71 - Support for Python 3.11

Pull Request - State: closed - Opened by tomasstolker about 1 year ago

#70 - TypeCheckError: argument "deredden" (None)

Issue - State: closed - Opened by f4hzg about 1 year ago - 5 comments
Labels: bug

#69 - SPHINX M-dwarf grid

Issue - State: closed - Opened by wbalmer about 1 year ago - 2 comments
Labels: enhancement

#68 - Retrieving free abundances that vary with altitude

Pull Request - State: closed - Opened by tomasstolker about 1 year ago

#67 - Fit tool for estimating ages and masses from luminosities

Pull Request - State: closed - Opened by tomasstolker about 1 year ago

#66 - Changed use of interp2d to RegularGridInterpolator

Pull Request - State: closed - Opened by tomasstolker about 1 year ago

#65 - interp2d deprecation in SciPy 1.10 leads to too many warnings printed during sampling

Issue - State: closed - Opened by wbalmer about 1 year ago - 1 comment
Labels: bug

#64 - [bug] Flux-To-Magnitude conversion: error propagation

Issue - State: closed - Opened by nenasedk over 1 year ago - 1 comment
Labels: bug

#63 - [bug] Writing to hdf5 file fails with run_multinest and run_ultranest.

Issue - State: closed - Opened by nenasedk over 1 year ago - 8 comments
Labels: bug, good first issue

#62 - CVE-2007-4559 Patch

Pull Request - State: closed - Opened by TrellixVulnTeam almost 2 years ago

#61 - add ATMO-low logg model grid from Petrus+22?

Issue - State: closed - Opened by wbalmer almost 2 years ago - 2 comments
Labels: enhancement

#60 - Support for converting line luminosities into accretion luminosities

Pull Request - State: closed - Opened by tomasstolker almost 2 years ago

#59 - BTSettl-CIFIST models error with read_model.py and scipy interpnd

Issue - State: closed - Opened by logan-pearce about 2 years ago - 2 comments
Labels: bug, question

#58 - Notebook tutorial for atmospheric retrievals and many new features

Pull Request - State: closed - Opened by tomasstolker over 2 years ago

#56 - Refactoring of add_model and support for Sonora models

Pull Request - State: closed - Opened by tomasstolker almost 3 years ago - 1 comment

#55 - Support for fitting blended stars/companions with FitModel

Pull Request - State: closed - Opened by tomasstolker almost 3 years ago - 1 comment

#54 - New features for AtmosphericRetrieval

Pull Request - State: closed - Opened by tomasstolker almost 3 years ago

#53 - Error in loglikelihood function: returned non-finite number

Issue - State: closed - Opened by wbalmer almost 3 years ago - 3 comments
Labels: bug, question

#52 - Flux conservation for retrieving physical temperature profiles

Pull Request - State: closed - Opened by tomasstolker about 3 years ago

#51 - Framework for atmospheric retrievals with petitRADTRANS

Pull Request - State: closed - Opened by tomasstolker about 3 years ago

#50 - Warning: 'PyMultiNest could not be imported.'

Issue - State: open - Opened by suvadip31 about 3 years ago - 4 comments
Labels: question

#49 - Error during installation

Issue - State: closed - Opened by suvadip31 about 3 years ago - 4 comments
Labels: question

#48 - Empirical low-gravity spectra and development of comparison tools

Pull Request - State: closed - Opened by tomasstolker about 3 years ago

#47 - Spectra of directly imaged planets and brown dwarfs

Pull Request - State: closed - Opened by tomasstolker over 3 years ago

#46 - Running example fails with UnboundLocalError: local variable 'integrand1' referenced before assignment ...

Issue - State: closed - Opened by mfeldt over 3 years ago - 9 comments
Labels: bug, question

#45 - Added functionalities for the analysis of emission lines

Pull Request - State: closed - Opened by tomasstolker over 3 years ago

#44 - Comply with detector type update on SVO website

Pull Request - State: closed - Opened by tomasstolker over 3 years ago

#43 - spectral_type

Issue - State: closed - Opened by henrikruh over 3 years ago - 1 comment
Labels: bug

#42 - Added the smooth_spectrum and resample_spectrum methods to ModelBox

Pull Request - State: closed - Opened by tomasstolker over 3 years ago

#41 - Added wavel_resample and phot_type parameters

Pull Request - State: closed - Opened by tomasstolker over 3 years ago - 1 comment

#40 - Tutorial for fitting data with model spectra

Pull Request - State: closed - Opened by tomasstolker over 3 years ago

#39 - Check MPI rank when storing FitModel

Pull Request - State: closed - Opened by tomasstolker over 3 years ago

#38 - Tools for empirical spectral analysis

Pull Request - State: closed - Opened by tomasstolker over 3 years ago

#37 - Added spec_res parameter to ReadCalibration.resample_spectrum

Pull Request - State: closed - Opened by tomasstolker over 3 years ago

#36 - Nested sampling with UltraNest

Pull Request - State: closed - Opened by tomasstolker over 3 years ago

#35 - Compatibility with Python 3.8

Pull Request - State: closed - Opened by tomasstolker almost 4 years ago

#33 - Improved sampling of the log-normal distribution

Pull Request - State: closed - Opened by tomasstolker almost 4 years ago

#32 - Use only last axis for parameter selection in samples

Pull Request - State: closed - Opened by vandalt almost 4 years ago

#31 - Number of steps cut with fixed parameters

Issue - State: closed - Opened by vandalt almost 4 years ago - 2 comments
Labels: bug

#30 - Improved tutorial for flux calibration

Pull Request - State: closed - Opened by tomasstolker almost 4 years ago

#29 - Updated tutorial for comparing model and data

Pull Request - State: closed - Opened by tomasstolker almost 4 years ago

#28 - Updated documentation and color-magnitude tutorial

Pull Request - State: closed - Opened by tomasstolker almost 4 years ago

#27 - petitCODE hot spectra are publicly available

Pull Request - State: closed - Opened by tomasstolker almost 4 years ago

#23 - Resampled the BT-NextGen spectra and changed their download location

Pull Request - State: closed - Opened by tomasstolker about 4 years ago

#22 - Support for filters from photon-counting detectors

Pull Request - State: closed - Opened by tomasstolker about 4 years ago

#21 - New storage location for the AMES-Dusty spectra

Pull Request - State: closed - Opened by tomasstolker about 4 years ago

#20 - Changed the storage location of the AMES-Cond spectra

Pull Request - State: closed - Opened by tomasstolker about 4 years ago

#19 - Extinction parameters for a power-law size distribution of grains

Pull Request - State: closed - Opened by tomasstolker about 4 years ago

#18 - Support for ISM extinction parameters in FitModel

Pull Request - State: closed - Opened by tomasstolker about 4 years ago

#17 - Some maintenance and improvements to the plotting functions

Pull Request - State: closed - Opened by tomasstolker over 4 years ago

#16 - Updated use of spectres and timeout added to SpeciesInit

Pull Request - State: closed - Opened by tomasstolker over 4 years ago

#15 - Bug fix for interpolating missing grid point and more

Pull Request - State: closed - Opened by tomasstolker over 4 years ago - 1 comment

#14 - Bug fix ndim in run_mcmc, flux option in plot_spectrum

Pull Request - State: closed - Opened by tomasstolker over 4 years ago

#13 - Separation of data and model legend in plot_spectrum

Pull Request - State: closed - Opened by tomasstolker over 4 years ago