tlverse/hal9001 issues and pull requests

#116 - update GH actions and fix readme

Pull Request - State: closed - Opened by nhejazi 3 months ago

#115 - merge conflict in README

Issue - State: closed - Opened by benkeser 7 months ago

#114 - Default `max_degree = ifelse(ncol(X) >= 20, 2, 3)`

Issue - State: open - Opened by bahn857 10 months ago

#113 - k-means clustering based knot-point screening

Pull Request - State: open - Opened by tq21 10 months ago

#112 - reduce defaults for knot points

Pull Request - State: closed - Opened by nhejazi 10 months ago

#111 - Still have bases with interactions when setting max_degree = 1

Issue - State: open - Opened by SeraphinaShi about 1 year ago - 2 comments

#110 - Fix matrix

Pull Request - State: closed - Opened by jeremyrcoyle over 1 year ago

#109 - Update needed ahead of Matrix 1.6-2 release

Issue - State: closed - Opened by jaganmn over 1 year ago - 2 comments

#108 - adding generate_all_rules to summary function

Pull Request - State: closed - Opened by blind-contours over 1 year ago

#107 - Update make_basis.R

Pull Request - State: closed - Opened by Larsvanderlaan over 1 year ago

#106 - Fix quantizer (minor change in how num_knots is used)

Pull Request - State: closed - Opened by Larsvanderlaan over 1 year ago

#105 - Speeding up the Highly Adaptive Lasso with recursive screening via MARS

Pull Request - State: open - Opened by Larsvanderlaan about 2 years ago - 8 comments

#104 - Symmetric reduce_basis

Issue - State: open - Opened by rachaelvp about 2 years ago

#103 - Remove lassi artifacts

Pull Request - State: closed - Opened by rachaelvp over 2 years ago

#102 - Support for multivariate outcome prediction

Pull Request - State: closed - Opened by rachaelvp over 2 years ago

#101 - Update formula_hal9001.R

Pull Request - State: closed - Opened by Larsvanderlaan over 2 years ago - 3 comments

#100 - `fit_control` simplification, `prediction_bounds` bug fix, and improved `SL.hal9001`

Pull Request - State: closed - Opened by rachaelvp almost 3 years ago - 4 comments

#99 - v0.4.3: minor improvements

Pull Request - State: closed - Opened by nhejazi about 3 years ago

#98 - `num_knots` default does not grow with sample size?

Issue - State: closed - Opened by benkeser about 3 years ago - 2 comments
Labels: question

#97 - Fix bug in formula for `h(.)` case

Pull Request - State: closed - Opened by Larsvanderlaan about 3 years ago - 3 comments

#96 - CRAN solaris builds fail

Issue - State: closed - Opened by nhejazi about 3 years ago - 1 comment
Labels: bug, help wanted

#95 - Fixing mismatched column names in `predict.hal9001` method

Pull Request - State: closed - Opened by WenxinZhang25 over 3 years ago

#94 - Reduce testing time for CRAN

Pull Request - State: closed - Opened by nhejazi over 3 years ago

#93 - Formula change

Pull Request - State: closed - Opened by Larsvanderlaan over 3 years ago - 8 comments

#92 - Migrate CI to GitHub actions

Pull Request - State: closed - Opened by nhejazi over 3 years ago
Labels: enhancement

#91 - Minor change to binning function

Pull Request - State: closed - Opened by Larsvanderlaan over 3 years ago - 3 comments

#90 - Update master, prep for updated CRAN release

Pull Request - State: closed - Opened by jeremyrcoyle over 3 years ago

#89 - python version

Issue - State: closed - Opened by matthewvowels1 over 3 years ago - 3 comments
Labels: question

#88 - Update `formula_hal9001.R`

Pull Request - State: closed - Opened by Larsvanderlaan almost 4 years ago - 3 comments
Labels: enhancement

#87 - `summary` for higher-order fits, argument changes, updates to `formula_hal` + `fit_hal`

Pull Request - State: closed - Opened by rachaelvp almost 4 years ago - 2 comments
Labels: enhancement

#86 - Add `lambda.min.ratio` argument again

Pull Request - State: closed - Opened by Larsvanderlaan almost 4 years ago - 4 comments
Labels: enhancement

#85 - Back to...matrix predictions

Pull Request - State: closed - Opened by nhejazi almost 4 years ago - 2 comments
Labels: bug

#84 - HAL fails to return a matrix of predictions when `cv_select=FALSE`

Issue - State: closed - Opened by nhejazi almost 4 years ago - 2 comments
Labels: bug

#83 - use origami to make folds

Pull Request - State: closed - Opened by jeremyrcoyle almost 4 years ago

#82 - Cleaning up `fit_hal` docs and args

Pull Request - State: closed - Opened by nhejazi almost 4 years ago
Labels: enhancement

#81 - Option to avoid penalizing one-way basis functions for time in pooled hazard regression

Issue - State: open - Opened by Larsvanderlaan almost 4 years ago - 1 comment
Labels: enhancement

#80 - Redo formula version of `fit_hal`

Pull Request - State: closed - Opened by Larsvanderlaan almost 4 years ago - 2 comments

#79 - not so small-ish fixes

Pull Request - State: closed - Opened by jeremyrcoyle almost 4 years ago - 2 comments
Labels: bug, enhancement

#78 - General family

Pull Request - State: closed - Opened by Larsvanderlaan almost 4 years ago - 4 comments

#77 - higher-order HAL + knot point specification + formula interface

Pull Request - State: closed - Opened by Larsvanderlaan about 4 years ago

#76 - [WIP] Formula interface

Pull Request - State: closed - Opened by jeremyrcoyle about 4 years ago

#75 - Quasibinomial family

Issue - State: closed - Opened by Lauren-EylerDang about 4 years ago - 3 comments

#74 - Poisson family support and fit object simplification

Pull Request - State: closed - Opened by nhejazi about 4 years ago
Labels: enhancement

#73 - v0.2.7: `summary` method and JOSS paper

Pull Request - State: closed - Opened by nhejazi over 4 years ago - 1 comment

#72 - Poisson family?

Issue - State: closed - Opened by tcovert over 4 years ago - 4 comments
Labels: question

#71 - JOSS review

Pull Request - State: closed - Opened by nhejazi over 4 years ago - 1 comment

#70 - Competing work

Issue - State: closed - Opened by daviddewhurst over 4 years ago - 3 comments

#69 - Example usage

Issue - State: closed - Opened by daviddewhurst over 4 years ago - 2 comments

#68 - Revert "Hal9001KthOrderAndScreening"

Pull Request - State: closed - Opened by jeremyrcoyle over 4 years ago

#67 - Hal9001KthOrderAndScreening

Pull Request - State: closed - Opened by Larsvanderlaan over 4 years ago

#66 - Paper references

Issue - State: closed - Opened by rrrlw over 4 years ago - 1 comment

#65 - License file completion

Issue - State: closed - Opened by rrrlw over 4 years ago - 1 comment

#64 - HAL Summary

Pull Request - State: closed - Opened by rachaelvp over 4 years ago - 1 comment

#63 - Export basis filtering procedure

Pull Request - State: closed - Opened by nhejazi over 4 years ago

#62 - Basis filter fix

Pull Request - State: closed - Opened by rachaelvp over 4 years ago - 1 comment

#61 - v0.2.6 release

Pull Request - State: closed - Opened by nhejazi over 4 years ago

#60 - JOSS paper

Pull Request - State: closed - Opened by nhejazi over 4 years ago

#59 - Bug fixes

Pull Request - State: closed - Opened by nhejazi almost 5 years ago

#58 - lambda parameter ignored by predict.hal9001

Issue - State: closed - Opened by prockenschaub almost 5 years ago - 2 comments
Labels: bug

#57 - `lambda.min.ratio` ignored by `glmnet` for `family = "binomial"`

Issue - State: closed - Opened by nhejazi almost 5 years ago - 1 comment
Labels: bug

#56 - relaxing HAL constraints from `glmnet` defaults

Issue - State: closed - Opened by nhejazi almost 5 years ago
Labels: enhancement

#55 - CRAN release updates

Pull Request - State: closed - Opened by nhejazi about 5 years ago

#54 - Issues installing the package

Issue - State: closed - Opened by Bahamyirou about 5 years ago - 5 comments

#53 - Halscreenz

Pull Request - State: closed - Opened by YuZhang2019 about 5 years ago

#52 - Halscreenz

Pull Request - State: closed - Opened by YuZhang2019 about 5 years ago - 4 comments

#51 - Formal argument for `foldid` + CRANify

Pull Request - State: closed - Opened by nhejazi about 5 years ago - 1 comment
Labels: enhancement

#50 - binary prediction fails when `cv_select = FALSE`

Issue - State: closed - Opened by nhejazi over 5 years ago
Labels: bug

#49 - fitting grouped binomial

Issue - State: closed - Opened by HughSt over 5 years ago - 2 comments

#48 - Support penalized Cox regression

Pull Request - State: closed - Opened by nhejazi over 5 years ago
Labels: enhancement

#47 - Fixes #46 + Updates

Pull Request - State: closed - Opened by nhejazi over 5 years ago
Labels: bug, enhancement

#46 - predict method not working when reduce_basis

Issue - State: closed - Opened by sgruber65 over 5 years ago - 1 comment
Labels: bug

#45 - degrees should not be NULL by default?

Issue - State: closed - Opened by nhejazi almost 6 years ago - 1 comment
Labels: question

#44 - add origami to remotes (CRAN removal)

Pull Request - State: closed - Opened by nhejazi almost 6 years ago

#43 - add x_unpenalized functionality

Pull Request - State: closed - Opened by wilsoncai1992 almost 6 years ago - 6 comments

#42 - Conflict with data.table package

Issue - State: closed - Opened by rfherrerac almost 6 years ago - 1 comment

#41 - Support high dimensional data via screening

Pull Request - State: closed - Opened by jeremyrcoyle almost 6 years ago - 4 comments

#40 - Updates to single glmnet procedure

Pull Request - State: closed - Opened by nhejazi about 6 years ago - 6 comments
Labels: enhancement

#39 - Return basis functions optionally

Pull Request - State: closed - Opened by nhejazi about 6 years ago - 5 comments
Labels: enhancement

#38 - enable single lambda capability; add output field

Pull Request - State: closed - Opened by wilsoncai1992 about 6 years ago - 1 comment
Labels: enhancement

#37 - Reduce basis functions used

Pull Request - State: closed - Opened by nhejazi over 6 years ago

#36 - fix docs

Pull Request - State: closed - Opened by nhejazi over 6 years ago - 2 comments

#35 - use specify basis_list

Pull Request - State: closed - Opened by wilsoncai1992 over 6 years ago

#34 - additive models

Issue - State: open - Opened by benkeser over 6 years ago - 2 comments
Labels: enhancement

#33 - lasso fits while bounding L1 norm

Issue - State: closed - Opened by nhejazi over 6 years ago - 1 comment
Labels: enhancement

#32 - predict method should break here but gives a wrong answer instead...

Issue - State: closed - Opened by jlstiles over 6 years ago - 4 comments
Labels: question

#31 - Resolve predictions bug with classical SuperLearner

Pull Request - State: closed - Opened by nhejazi over 6 years ago - 1 comment
Labels: bug

#30 - Use hal9001 in superlearner() in R

Issue - State: closed - Opened by TerrySun920302 over 6 years ago - 3 comments
Labels: bug

#29 - return lasso fits upon request

Pull Request - State: closed - Opened by benkeser almost 7 years ago - 2 comments

#28 - should replace `ml_hal_fit` with `squashed` right?

Issue - State: closed - Opened by wilsoncai1992 almost 7 years ago - 2 comments

#27 - custom gradient descent with momentum

Issue - State: closed - Opened by nhejazi almost 7 years ago - 3 comments
Labels: enhancement

#26 - Link DOIs to preferred resolver

Pull Request - State: closed - Opened by katrinleinweber almost 7 years ago - 1 comment

#25 - custom IRLS implementation

Issue - State: closed - Opened by nhejazi almost 7 years ago - 1 comment
Labels: enhancement

#24 - re-haul non-cpp parts

Pull Request - State: closed - Opened by nhejazi almost 7 years ago - 1 comment

#23 - Cleanup lassi

Pull Request - State: closed - Opened by jeremyrcoyle almost 7 years ago

#22 - making HAL faster

Issue - State: closed - Opened by nhejazi about 7 years ago - 1 comment
Labels: enhancement

#21 - hal needs speed

Issue - State: closed - Opened by nhejazi about 7 years ago

#20 - lassi code should be class

Issue - State: closed - Opened by jeremyrcoyle about 7 years ago - 1 comment
Labels: enhancement

#19 - Add Benchmarks

Pull Request - State: closed - Opened by nhejazi over 7 years ago

#18 - coupling lambda search with CV

Issue - State: closed - Opened by nhejazi over 7 years ago - 1 comment
Labels: enhancement

#16 - recording lambda_star in the output

Pull Request - State: closed - Opened by wilsoncai1992 over 7 years ago - 1 comment

GitHub / tlverse/hal9001 issues and pull requests