Ecosyste.ms: Issues

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GitHub / tlambert03/ome-types issues and pull requests

#262 - fix: swallow exceptions on is_model

Pull Request - State: closed - Opened by tlambert03 6 days ago - 2 comments
Labels: bug

#261 - reading OME XML crashes when pyQtGraph has been imported

Issue - State: closed - Opened by fevemo 7 days ago - 5 comments

#260 - build: drop python 3.8, support python 3.13

Pull Request - State: open - Opened by tlambert03 18 days ago - 3 comments

#259 - ci(dependabot): bump CodSpeedHQ/action from 2 to 3

Pull Request - State: closed - Opened by dependabot[bot] 2 months ago
Labels: dependencies

#258 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 5 months ago
Labels: hide

#257 - style: add back typos to pre-commit, update

Pull Request - State: closed - Opened by tlambert03 5 months ago - 2 comments

#256 - docs: fix plural names in docs

Pull Request - State: closed - Opened by tlambert03 5 months ago - 2 comments
Labels: documentation

#255 - ome-types.readthedoc - attribute tiff_data in Pixels

Issue - State: closed - Opened by rmassei 6 months ago - 3 comments

#254 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 6 months ago

#253 - `xsdata == 24.4` causing issues with `to_xml` downstream

Issue - State: open - Opened by erickmartins 6 months ago - 11 comments

#252 - populating refs should be easier

Issue - State: open - Opened by tlambert03 7 months ago

#251 - Bug: ome_xml() cannot be encoded to bytes with ascii encoding

Issue - State: closed - Opened by tlambert03 7 months ago - 1 comment

#250 - refactor: Cleanup autogeneration

Pull Request - State: closed - Opened by tlambert03 7 months ago - 2 comments
Labels: refactor

#249 - feat: make Map implement MutableMapping interface

Pull Request - State: closed - Opened by tlambert03 7 months ago - 4 comments
Labels: enhancement

#248 - Appending elements to an OME object

Issue - State: closed - Opened by phisanti 7 months ago - 4 comments

#247 - ci(dependabot): bump softprops/action-gh-release from 1 to 2

Pull Request - State: closed - Opened by dependabot[bot] 7 months ago - 1 comment
Labels: dependencies

#246 - chore: replace black with ruff-format

Pull Request - State: closed - Opened by tlambert03 7 months ago - 2 comments

#245 - build: drop support for python3.7

Pull Request - State: closed - Opened by tlambert03 7 months ago - 3 comments

#244 - ci: support python 3.12 and test min dependencies on ci

Pull Request - State: closed - Opened by tlambert03 7 months ago - 2 comments
Labels: tests

#243 - fix: compatibility fixes for xsdata >=24

Pull Request - State: closed - Opened by tlambert03 7 months ago - 2 comments
Labels: bug, dependencies

#242 - AttributeError with freshly released `xsdata==24.2`

Issue - State: closed - Opened by m-albert 8 months ago - 4 comments

#241 - ci(dependabot): bump codecov/codecov-action from 3 to 4

Pull Request - State: open - Opened by dependabot[bot] 8 months ago
Labels: dependencies

#240 - ci(pre-commit.ci): autoupdate

Pull Request - State: open - Opened by pre-commit-ci[bot] 8 months ago - 1 comment

#239 - ci(dependabot): bump actions/cache from 3 to 4

Pull Request - State: open - Opened by dependabot[bot] 8 months ago - 1 comment
Labels: dependencies

#238 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 9 months ago - 2 comments

#237 - refactor: different pattern for structured annotations list and shapes union

Pull Request - State: closed - Opened by tlambert03 10 months ago - 3 comments

#236 - feat: support pydantic-compat v0.2.

Pull Request - State: closed - Opened by tlambert03 10 months ago - 2 comments
Labels: enhancement

#235 - fix: fix output to JSON schema [WIP]

Pull Request - State: closed - Opened by tlambert03 10 months ago - 3 comments
Labels: bug

#227 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] 12 months ago - 2 comments

#226 - fix: simplify build of kwargs

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments

#225 - feat: build typed kwargs dicts

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments

#224 - build: update pydantic compat to v0.1.0

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments

#223 - fix: update vendored color deprecations

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments

#222 - feat: modulo[wip]

Pull Request - State: open - Opened by tlambert03 about 1 year ago - 4 comments

#221 - xmlschema 2.5 not working for validation

Issue - State: open - Opened by tlambert03 about 1 year ago

#220 - build: fix build with ruff

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment

#219 - feat: add from_array convenience functions

Pull Request - State: open - Opened by tlambert03 about 1 year ago - 2 comments

#218 - bug: issue with repr in list types

Issue - State: open - Opened by tlambert03 about 1 year ago

#217 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 year ago - 2 comments

#216 - ci(dependabot): bump actions/checkout from 3 to 4

Pull Request - State: closed - Opened by dependabot[bot] about 1 year ago - 2 comments
Labels: dependencies

#215 - fix: fix import of removed private vendored attr in pydantic

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 5 comments
Labels: bug

#214 - Feature Request: Add a from_dict( ) method to create an OME object

Issue - State: closed - Opened by sameeul about 1 year ago - 1 comment

#213 - build: use pydantic-compat library

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments

#212 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 year ago - 2 comments

#211 - fix: remove print

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: bug

#210 - fix: update stacklevel for deprecation warning

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: bug

#209 - feat: catch and fix lowercase 'ome' in schemas

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: enhancement

#208 - feat: add transformations to from_xml

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: enhancement

#207 - feat: add back napari plugin

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: enhancement

#206 - build: remove pydantic-extra-types dep

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: build

#205 - feat: support pydantic2

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: enhancement

#204 - fix: fix missing set values in xml output

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: bug

#203 - docs: add migration guide for v0.4.0

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: documentation

#202 - feat: add `numpy_dtype` property to PixelType

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: enhancement

#201 - feat: to_etree_element

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: enhancement

#200 - ci: add codspeed benchmarks

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: tests

#199 - feat: transform old schema

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: enhancement

#198 - test: test for bad dates

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: tests

#197 - ci: fixing built branch

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: tests

#196 - build: make pint and lxml optional deps

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: build

#195 - ci: coverage changes

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: tests

#194 - fix: Move deprecated init kwargs to proper fields

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: bug

#193 - docs: updating docs

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: documentation

#192 - test: rearranging tests

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: tests

#191 - test: more omero-cli tests

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: tests

#190 - fix: Fix colors

Pull Request - State: closed - Opened by tlambert03 about 1 year ago
Labels: bug

#189 - build: add back py37 support

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: build

#188 - test: add nd2 test

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: tests

#187 - test: Omero-cli-transfer test

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 2 comments
Labels: tests

#186 - fix: better sequence for structured annotations

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: bug

#185 - feat: add 'kind' field to dict output for various subclasses that are otherwise identical

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: enhancement

#184 - fix: fix metadata only

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: bug

#183 - fix: Metadataonly

Pull Request - State: closed - Opened by tlambert03 about 1 year ago

#182 - fix: use date time instead of xsdata XMLDateTime

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: bug

#181 - feat: better rich_repr

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: enhancement

#180 - fix: more robust id conversion

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: bug

#179 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] about 1 year ago
Labels: hide

#178 - test: add typing tests

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: tests

#177 - test: add more tests

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: tests

#176 - feat: complete rewrite, using xsdata instead of xmlschema

Pull Request - State: closed - Opened by tlambert03 about 1 year ago - 1 comment
Labels: enhancement

#175 - feat: Replace v1

Pull Request - State: closed - Opened by tlambert03 over 1 year ago - 2 comments

#174 - feat: Xsdata autogen [wip]

Pull Request - State: closed - Opened by tlambert03 over 1 year ago - 1 comment

#173 - [wip] Check in model

Pull Request - State: closed - Opened by tlambert03 over 1 year ago - 1 comment

#172 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago

#171 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago
Labels: hide

#170 - Validation errors with Slidebook ome-tiff export

Issue - State: closed - Opened by jni over 1 year ago - 1 comment

#169 - fix: always get schema in xmlschema2dict

Pull Request - State: closed - Opened by tlambert03 over 1 year ago
Labels: bug

#167 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago
Labels: hide

#166 - feat: make lxml optional (but don't yet remove from requirements)

Pull Request - State: closed - Opened by tlambert03 over 1 year ago
Labels: enhancement

#165 - refactor: init_subclass instead of metaclass

Pull Request - State: closed - Opened by tlambert03 over 1 year ago
Labels: refactor

#164 - fix: prevent unset color from getting output in the XML

Pull Request - State: closed - Opened by tlambert03 over 1 year ago
Labels: bug

#163 - Unable to not speciy Channel.Color

Issue - State: closed - Opened by folterj over 1 year ago - 1 comment

#162 - ci(pre-commit.ci): autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago
Labels: hide

#161 - build: Use hatchling for build backend

Pull Request - State: closed - Opened by tlambert03 almost 2 years ago
Labels: build

#160 - style: update pre-commit, use ruff instead of flake8

Pull Request - State: closed - Opened by tlambert03 almost 2 years ago
Labels: tests

#159 - fix: use lax validation by default

Pull Request - State: closed - Opened by tlambert03 almost 2 years ago
Labels: bug

#158 - ci: [pre-commit.ci] autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] almost 2 years ago - 1 comment

#157 - build: lxml as extra

Pull Request - State: closed - Opened by ap-- almost 2 years ago - 6 comments

#156 - build: Remove upper version bound of xmlschema dependency

Pull Request - State: closed - Opened by ap-- almost 2 years ago - 2 comments
Labels: dependencies