Ecosyste.ms: Issues

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GitHub / tidymodels/censored issues and pull requests

#333 - Does normalization of predictors work in glmnet with censored?

Issue - State: closed - Opened by jesusherranz 4 months ago - 7 comments

#332 - use hardhat::quantile_pred

Pull Request - State: open - Opened by topepo 4 months ago - 1 comment

#331 - Time predictions from `decision_tree()` with the "rpart" engine correct?

Issue - State: open - Opened by jesusherranz 5 months ago - 2 comments
Labels: bug

#330 - Use latest GHA workflows

Pull Request - State: closed - Opened by gaborcsardi 6 months ago - 1 comment

#329 - TDD prep: re`document()` with new roxygen

Pull Request - State: closed - Opened by simonpcouch 6 months ago - 1 comment

#328 - Update roxygen2 version to 7.3.2

Pull Request - State: closed - Opened by hfrick 7 months ago - 1 comment

#327 - Make use of `data.frame = TRUE` option to `summary.survfit()`

Issue - State: open - Opened by hfrick 8 months ago
Labels: upkeep

#326 - RC 0.3.2

Pull Request - State: closed - Opened by hfrick 8 months ago - 1 comment

#325 - Release censored 0.3.2

Issue - State: closed - Opened by hfrick 8 months ago - 1 comment

#324 - Remove obsolete survfit helpers

Pull Request - State: closed - Opened by hfrick 8 months ago - 1 comment

#323 - fix typo

Pull Request - State: closed - Opened by hfrick 8 months ago - 1 comment

#322 - Update GHA

Pull Request - State: closed - Opened by hfrick 8 months ago - 2 comments

#321 - Updates for survival 3.7-0

Pull Request - State: closed - Opened by hfrick 8 months ago - 1 comment

#320 - survival 3.7-0 breaks censored

Issue - State: closed - Opened by hfrick 8 months ago - 1 comment

#319 - RC 0.3.1

Pull Request - State: closed - Opened by hfrick 10 months ago - 1 comment

#318 - Release censored 0.3.1

Issue - State: closed - Opened by hfrick 10 months ago - 1 comment

#317 - Adapt for upcoming flexsurv version 2.3

Pull Request - State: closed - Opened by hfrick 10 months ago - 1 comment

#316 - Test flexsurv engine against flexsurv output instead of rms

Issue - State: open - Opened by hfrick 10 months ago
Labels: upkeep

#315 - Follow-up to 314

Pull Request - State: closed - Opened by hfrick 10 months ago - 1 comment

#314 - test {cli} changes to `check_args()`

Pull Request - State: closed - Opened by EmilHvitfeldt 10 months ago - 1 comment

#313 - remove print._coxnet()

Pull Request - State: closed - Opened by EmilHvitfeldt 10 months ago - 5 comments

#312 - remove misregistered `decision_tree(engine = "partykit")` argument

Pull Request - State: closed - Opened by simonpcouch 10 months ago - 1 comment

#311 - `coxnet_train()` struggles with large number of predictors

Issue - State: open - Opened by hfrick about 1 year ago

#310 - RC 0.3.0

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#309 - Release censored 0.3.0

Issue - State: closed - Opened by hfrick about 1 year ago - 1 comment

#308 - Enable predictions of survival time with `aorsf`

Pull Request - State: closed - Opened by hfrick about 1 year ago - 2 comments

#307 - Quiet NOTE about prodlim

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#306 - also check without suggested packages

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#305 - Remove remote for aorsf

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#304 - Move `prodlim` to Imports

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#303 - Guard tests against suggestd packages being not available

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#302 - Harmonize inputs to `survival_*_*()` functions

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#301 - Enable predictions with `type = "time"` for aorsf

Issue - State: closed - Opened by hfrick about 1 year ago - 1 comment
Labels: feature

#299 - Add remote for aorsf

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#298 - Fix mismatched documentation for mboost helpers

Pull Request - State: closed - Opened by hfrick about 1 year ago - 2 comments

#297 - update roxygen2 version

Pull Request - State: closed - Opened by hfrick about 1 year ago - 2 comments

#296 - tune_grid() and tune_bayes() do not work with censored

Issue - State: closed - Opened by Tripartio about 1 year ago - 4 comments

#295 - Harmonize input for `survival_prob_*()` and `surival_time_*()` functions

Issue - State: closed - Opened by hfrick about 1 year ago - 1 comment

#294 - update .filter_eval_time()

Pull Request - State: closed - Opened by EmilHvitfeldt about 1 year ago - 1 comment

#293 - Update `.filter_eval_time()`

Issue - State: closed - Opened by hfrick about 1 year ago - 1 comment

#292 - Confirm main args for `bag_tree(engine = "rpart")` work

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#291 - Fix encodings

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#290 - `multi_predict()` for `mboost` models

Issue - State: open - Opened by hfrick about 1 year ago
Labels: feature

#289 - update GHA

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#288 - aorsf version 0.1.2

Pull Request - State: closed - Opened by bcjaeger about 1 year ago - 7 comments

#287 - update tests for `aorsf` version 0.1.2

Issue - State: closed - Opened by bcjaeger about 1 year ago - 4 comments

#286 - cli errors

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#285 - remove incorrect comment

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#284 - Fix output format

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#283 - `survival_prob_orsf()` should take a parnip model

Issue - State: closed - Opened by hfrick about 1 year ago - 2 comments

#282 - Enable `multi_predict._coxnet()` for all `type`s

Pull Request - State: closed - Opened by hfrick about 1 year ago - 3 comments

#281 - `survival_time_coxnet()`: default to `penalty` specified during fit

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#280 - fix typo in test description

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#279 - add `multi` arg to `survival_prob_coxnet()`

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#278 - Make `survival_time_coxnet()` work with multiple penalty values

Pull Request - State: closed - Opened by hfrick about 1 year ago - 1 comment

#277 - Enable `multi_predict()` for `type = "time"` for glmnet models

Issue - State: closed - Opened by hfrick about 1 year ago - 2 comments
Labels: feature

#276 - glmnet and sparse matrices

Issue - State: closed - Opened by hfrick about 1 year ago - 2 comments

#273 - Test predicting for out-of-domain time points

Pull Request - State: closed - Opened by hfrick about 1 year ago - 2 comments

#272 - `predict()` on a glmnet workflow with a model formula fails

Issue - State: closed - Opened by hfrick about 1 year ago - 5 comments
Labels: bug

#271 - Use rlang type-checkers

Issue - State: open - Opened by hfrick over 1 year ago
Labels: feature

#270 - Use cli errors

Issue - State: closed - Opened by hfrick over 1 year ago - 1 comment
Labels: feature

#269 - set mode in set_dependency()

Pull Request - State: closed - Opened by EmilHvitfeldt over 1 year ago - 3 comments

#268 - Passing Pre-specified Model Coefficients

Issue - State: closed - Opened by noahtsao over 1 year ago - 2 comments

#267 - `multi_predict(type = "survival")` is missing `penalty` column for single penalty value

Issue - State: closed - Opened by hfrick almost 2 years ago - 2 comments
Labels: bug

#266 - Clean-up of `$fit` slot of fitted glmnet models

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 4 comments

#265 - Don't carry glmnet training data twice

Issue - State: closed - Opened by hfrick almost 2 years ago - 1 comment
Labels: upkeep

#264 - Save training data as used in `coxnet_train()`

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#263 - Predict fails on glmnet model fitted through matrix interface

Issue - State: closed - Opened by hfrick almost 2 years ago - 1 comment
Labels: bug

#262 - I want to port over all models from xgbse to here

Issue - State: closed - Opened by brunocarlin almost 2 years ago - 2 comments

#261 - Support interval estimates

Issue - State: open - Opened by hfrick almost 2 years ago
Labels: feature

#260 - Fresh implementation aft and cox

Pull Request - State: closed - Opened by brunocarlin almost 2 years ago - 1 comment

#259 - RC 0.2.0

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#258 - Release censored 0.2.0

Issue - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#257 - Prediction of single observation

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#256 - fix pred survival for single obs

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#255 - Prediction of survival prob for single obs with `decision_tree(engine = "rpart")`

Issue - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#254 - Nest survival/hazard predictions for scalar `eval_time` for flexsurv engines

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#253 - Remove unused info on tunable engine args for partykit

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#252 - fix version number for prodlim

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#251 - Fix prediction with glmnet after `fit_xy()`

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#250 - Prediction with glmnet model fitted via `fit_xy()` fails for data frame input

Issue - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#249 - Fix print method for `coxnet` models

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#248 - Improve error messages

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#247 - Enable `fit_xy()` for `decison_tree()` with the `"rpart"` engine

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#246 - update remote to parsnip

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#245 - update snapshots for new pillar version

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#244 - `time` to `eval_time`

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 4 comments

#243 - doc updates post styler

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#242 - glmnet `linear_pred`: flip sign for `multi_predict()`

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#241 - Update names for evaluation time

Issue - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#240 - Run styler

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#239 - update roxygen2 version

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#238 - Spring clean 2023 🧼

Pull Request - State: closed - Opened by hfrick almost 2 years ago - 1 comment

#237 - Upkeep for censored 2023

Issue - State: closed - Opened by hfrick almost 2 years ago - 2 comments

#236 - Try to get around usage of `time` arg in post-hook

Issue - State: closed - Opened by hfrick about 2 years ago - 4 comments

#235 - add pkgdown URL

Pull Request - State: closed - Opened by hfrick about 2 years ago - 1 comment

#234 - Enable `fix_xy()` for flexsurv engines

Pull Request - State: closed - Opened by hfrick about 2 years ago - 1 comment

#233 - Update snapshots for purrr v1.0.0

Pull Request - State: closed - Opened by hfrick about 2 years ago - 1 comment