tiagofilipe12/patlas issues and pull requests

#162 - the website is down

Issue - State: open - Opened by ilkaybuysal about 4 years ago - 2 comments

#161 - Add download csv for bacmet

Issue - State: closed - Opened by tiagofilipe12 about 6 years ago - 1 comment
Labels: enhancement

#160 - Bacmet implementation

Pull Request - State: closed - Opened by tiagofilipe12 about 6 years ago
Labels: enhancement

#159 - Add documentation on how to run FlowCraft

Issue - State: closed - Opened by tiagofilipe12 about 6 years ago - 1 comment
Labels: documentation

#158 - Backend 1.6.0

Pull Request - State: closed - Opened by tiagofilipe12 about 6 years ago
Labels: enhancement, database

#157 - Replace multiple modals by steppers?

Issue - State: open - Opened by tiagofilipe12 about 6 years ago
Labels: Discussion

#156 - Implement log of additions and deletions from db

Issue - State: closed - Opened by tiagofilipe12 about 6 years ago - 4 comments
Labels: enhancement, documentation, database

#155 - Refactor jsons that populate the dropdowns.

Issue - State: open - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement

#154 - Routes results request

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago - 3 comments
Labels: enhancement, database

#153 - Db update

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: database

#152 - added info to modal

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement

#151 - Update docs for plasmid popup

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: documentation

#150 - remove legacy scripts

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago

#149 - Add views to receive results

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement

#148 - Dragndrop

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago - 1 comment
Labels: enhancement

#147 - Popup plot

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement

#146 - Add a script to generate the index files required for pipelines

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago - 1 comment
Labels: enhancement

#145 - Handle legend sliders when some filter is absent

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: bug

#144 - update docs

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: documentation

#143 - Shared hashes

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement

#142 - Modularize onload

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement

#141 - backing up version of master

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago

#140 - Simplify onload() function

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago - 1 comment
Labels: enhancement

#139 - Allow real accession numbers through API

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement

#138 - Bug with length plot label

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: bug

#137 - Dynamic download

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago - 1 comment
Labels: enhancement

#136 - added two new apis to download data from pATLAS database.

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago - 1 comment
Labels: enhancement

#135 - Add shared hashes between sequences to link information

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement, database

#134 - Projects

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago - 2 comments
Labels: enhancement

#133 - corrected popup description indexes

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago

#132 - Merge mashDistOutputJson JSON files into one for each sample

Issue - State: closed - Opened by ODiogoSilva over 6 years ago - 2 comments
Labels: enhancement

#131 - Combined selections

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago - 1 comment
Labels: enhancement

#130 - Consensus

Pull Request - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement

#129 - After filtering cannot use size ratio menu

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: bug

#128 - Issue with mapping sample

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: bug

#127 - Enable multiple filters

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement

#126 - Add node and link multiple colapse options

Issue - State: open - Opened by tiagofilipe12 over 6 years ago
Labels: enhancement

#125 - add export / import project

Issue - State: closed - Opened by tiagofilipe12 over 6 years ago - 2 comments
Labels: enhancement

#124 - consensus import

Issue - State: open - Opened by tiagofilipe12 over 6 years ago - 1 comment
Labels: enhancement

#123 - Add new sequences

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: database, Discussion

#122 - Test fastANI implementation

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago - 2 comments
Labels: Discussion

#121 - add virulence finder

Issue - State: open - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: enhancement, database

#120 - refactored some function definitions inside other functions

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment

#119 - started a refactor that will make main functions more modular

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: enhancement

#118 - Sequence import refactor

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: bug, enhancement

#117 - Sequence node never disappears

Issue - State: closed - Opened by cimendes almost 7 years ago - 1 comment
Labels: bug, enhancement

#116 - Colour Distance clears previous selections

Issue - State: closed - Opened by cimendes almost 7 years ago
Labels: bug

#115 - Fix sort button

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: enhancement

#114 - Vfdb

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: bug, enhancement

#113 - remove dependencies folder

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago
Labels: enhancement, documentation

#112 - Node size ratios

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 2 comments
Labels: enhancement, documentation

#111 - Taxa file contains odd entries

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago - 2 comments
Labels: bug

#110 - Cluster viz

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: enhancement, documentation

#109 - add vfdb database

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago
Labels: enhancement

#108 - add filter by column in table

Issue - State: open - Opened by tiagofilipe12 almost 7 years ago
Labels: enhancement

#107 - Cluster viz

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 4 comments
Labels: enhancement, epic

#106 - Shift key

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: bug, enhancement

#105 - add information on the difference of lengths between nodes

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: enhancement

#104 - freeze shift key when a modal is open

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago
Labels: bug, enhancement

#103 - welcome screen behavior and toggle-event

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: bug, enhancement

#102 - Add a Gitter chat badge to README.md

Pull Request - State: closed - Opened by gitter-badger almost 7 years ago

#101 - Splash screen

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago
Labels: enhancement

#100 - Link sizes

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 3 comments
Labels: enhancement

#99 - slider for multiple inputs on reads colors

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: enhancement

#98 - Heatmap

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 3 comments
Labels: enhancement

#97 - Length plot should be an histogram

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago
Labels: enhancement

#96 - Heat map for coverage results

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago
Labels: enhancement

#95 - Highcharts

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: enhancement

#94 - add sliding feature for importing multiple read files

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago - 2 comments
Labels: enhancement

#93 - replace plotly with highcharts

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago
Labels: enhancement

#92 - add singleton info to table

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago - 2 comments
Labels: bug

#91 - area selection rendering some previous selection rectangles

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago
Labels: bug

#90 - resizable div for popup

Issue - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: enhancement

#89 - Table area selection

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago - 1 comment
Labels: bug, enhancement

#88 - refactored toggle button to be used as plasmid name search engine

Pull Request - State: closed - Opened by tiagofilipe12 almost 7 years ago
Labels: enhancement

#87 - make a priority scheme for legend of taxa

Issue - State: closed - Opened by tiagofilipe12 about 7 years ago
Labels: enhancement

#86 - import file for multiple selections

Issue - State: closed - Opened by tiagofilipe12 about 7 years ago - 2 comments
Labels: enhancement

#85 - Bug fixes

Pull Request - State: closed - Opened by tiagofilipe12 about 7 years ago
Labels: enhancement

#84 - add multi drag and drop for nodes on selected nodes

Issue - State: closed - Opened by tiagofilipe12 about 7 years ago - 1 comment
Labels: enhancement, epic

#83 - Add labels to nodes

Issue - State: closed - Opened by tiagofilipe12 about 7 years ago - 1 comment
Labels: Discussion

#82 - Abr stats

Pull Request - State: closed - Opened by tiagofilipe12 about 7 years ago - 1 comment
Labels: enhancement, database

#81 - error while filtering with no taxa filters

Issue - State: closed - Opened by tiagofilipe12 about 7 years ago
Labels: enhancement

#80 - Abr filters

Pull Request - State: closed - Opened by tiagofilipe12 about 7 years ago - 1 comment
Labels: enhancement, database

#79 - add UI for graph control

Issue - State: open - Opened by tiagofilipe12 about 7 years ago
Labels: enhancement

#76 - implemented hiding and showing of plot container and progress bar

Pull Request - State: closed - Opened by tiagofilipe12 about 7 years ago
Labels: enhancement

#75 - add loading information for plots

Issue - State: closed - Opened by tiagofilipe12 about 7 years ago - 2 comments
Labels: enhancement, database

#69 - taxa_fetch.py refactor

Issue - State: closed - Opened by tiagofilipe12 about 7 years ago - 3 comments
Labels: enhancement, database

#65 - Display metadata box

Issue - State: closed - Opened by tiagofilipe12 about 7 years ago - 1 comment
Labels: enhancement

#64 - Add a slider for coverage

Issue - State: closed - Opened by tiagofilipe12 about 7 years ago - 1 comment
Labels: enhancement

#57 - Concurrency

Issue - State: closed - Opened by tiagofilipe12 about 7 years ago - 4 comments
Labels: bug

#48 - Add export image

Issue - State: open - Opened by tiagofilipe12 about 7 years ago - 2 comments
Labels: enhancement, epic

#38 - Add cluster visualization

Issue - State: closed - Opened by tiagofilipe12 over 7 years ago - 2 comments
Labels: enhancement

#35 - Update README

Issue - State: closed - Opened by tiagofilipe12 over 7 years ago
Labels: documentation

#33 - dropdown menu somewhat slow

Issue - State: closed - Opened by tiagofilipe12 over 7 years ago - 1 comment
Labels: enhancement

#32 - Add circular plots for coverage

Issue - State: closed - Opened by tiagofilipe12 over 7 years ago - 2 comments
Labels: enhancement, epic

#29 - Show filter coverage

Issue - State: closed - Opened by tiagofilipe12 over 7 years ago - 1 comment
Labels: enhancement

#28 - add each coverage length on read comparsion

Issue - State: closed - Opened by tiagofilipe12 over 7 years ago - 2 comments
Labels: enhancement

#27 - Report as csv

Issue - State: closed - Opened by tiagofilipe12 over 7 years ago - 1 comment
Labels: enhancement

#26 - Dark mode

Issue - State: open - Opened by tiagofilipe12 over 7 years ago - 1 comment
Labels: enhancement, epic

#15 - Add legend to read module

Issue - State: closed - Opened by tiagofilipe12 over 7 years ago - 4 comments
Labels: enhancement

GitHub / tiagofilipe12/patlas issues and pull requests