thespacedoctor/soxspipe issues and pull requests

#327 - SOX-011.1-A04: Download and reduce data for V1012_Ori (nodding mode). Fix reduction issues.

Issue - State: closed - Opened by thespacedoctor about 1 month ago - 1 comment

#326 - Allow for raw data to be 'streamed' into the workspace.

Issue - State: open - Opened by thespacedoctor about 1 month ago

#325 - Store raw frames in a nested folder structure, one folder per night

Issue - State: closed - Opened by thespacedoctor about 1 month ago - 1 comment

#324 - Bump pyyaml from 5.3.1 to 5.4

Pull Request - State: open - Opened by dependabot[bot] about 2 months ago
Labels: dependencies

#323 - Nodding recipe missing some QC metrics

Issue - State: closed - Opened by thespacedoctor about 2 months ago - 1 comment

#322 - SOX-011.1-A09 : improve extraction quality of HR 6420 of the BStar data set

Issue - State: open - Opened by thespacedoctor about 2 months ago

#321 - SOX-011.1-A09 : improve extraction quality of HD 212442 of the SLSN data set

Issue - State: open - Opened by thespacedoctor about 2 months ago

#320 - SOX-011.1-A09 : improve extraction quality of HD 66594 of the QSO J0310+0055 data set

Issue - State: closed - Opened by thespacedoctor about 2 months ago - 1 comment

#319 - SOX-011.1-A09 : improve extraction quality of SDSS0246+0825 data set

Issue - State: open - Opened by thespacedoctor about 2 months ago

#318 - SOX-011.1-A09 : improve extraction quality of HD 123247 of the 5BZQ J0256+2137

Issue - State: open - Opened by thespacedoctor about 2 months ago

#317 - SOX-011.1-A08 improve data reduction robustness for nodding data

Issue - State: open - Opened by thespacedoctor about 2 months ago - 2 comments

#316 - SOX-011.1-A07 Improve further residual (order merging?) quality problems on VIS spectrum for faint sources

Issue - State: open - Opened by thespacedoctor about 2 months ago

#315 - SOX-011.1-A07 Improve further residual (order merging?) quality problems on UVB spectrum for faint sources

Issue - State: closed - Opened by thespacedoctor about 2 months ago - 1 comment

#314 - SOX-011.1-A06: Improve further residual quality problems at the start of the NIR

Issue - State: closed - Opened by thespacedoctor about 2 months ago - 2 comments

#313 - SOX-011.1-A06: Improve further residual quality problems at the start of the UVB

Issue - State: closed - Opened by thespacedoctor about 2 months ago - 1 comment

#312 - X-shooter on purpose cuts the Dichroich region in the UVB ... make SOXS pipeline do the same.

Issue - State: closed - Opened by thespacedoctor about 2 months ago - 1 comment

#311 - SOX-011.1-A04: Download and reduce data for UX_Ori (nodding mode). Fix reduction issues.

Issue - State: closed - Opened by thespacedoctor about 2 months ago - 2 comments

#310 - SOX-011.1-A04: Download and reduce data for AK_Sco (nodding mode). Fix reduction issues.

Issue - State: closed - Opened by thespacedoctor about 2 months ago - 2 comments

#309 - Add a legend to the QC plots for the order-centre trace top panels

Issue - State: open - Opened by thespacedoctor about 2 months ago

#308 - File extensions for SOF files

Issue - State: open - Opened by thespacedoctor about 2 months ago

#307 - SOX-080-A11 & SOX-011.1-A03: Test robustness of the pipeline by reducing one month of data

Issue - State: closed - Opened by thespacedoctor about 2 months ago - 2 comments

#306 - SOX-011.1-A01: ESO is moving away from anacoonda due to licencing issues. Find a solution and add to docs.

Issue - State: closed - Opened by thespacedoctor about 2 months ago - 1 comment

#305 - Consider using a Savitzky-Golay filter when plotting the Xshooter/SOXS QC plots

Issue - State: open - Opened by thespacedoctor 2 months ago

#304 - rebuild quickstart data on 2 bright objects (nodding and stare)

Issue - State: open - Opened by thespacedoctor 3 months ago

#303 - Add telluric line location indicators to the extracted spectrum QC plot

Issue - State: open - Opened by thespacedoctor 3 months ago

#302 - Add a setting to allow user to choose between extracting individual stare frames vs stacking and extraction

Issue - State: open - Opened by thespacedoctor 3 months ago

#301 - Allow for the extraction of the UVVIS order centre traces (ala NIR)

Issue - State: open - Opened by thespacedoctor 3 months ago
Labels: priority: 1, type: enhancement

#300 - Recheck the SOXS NIR (and UVVIS) reductions with flats taken using the new ND blocking filter

Issue - State: open - Opened by thespacedoctor 3 months ago
Labels: priority: 1, type: investigation

#299 - Ensure the pipeline can robustly reduce SOXS data on the Padova data reduction machine

Issue - State: open - Opened by thespacedoctor 3 months ago
Labels: priority: 1, type: investigation

#298 - Install the pipeline on a machine in Padova

Issue - State: closed - Opened by thespacedoctor 3 months ago - 1 comment
Labels: priority: 1

#297 - Add the robust boxcar extractions to the order-merged FITS binary tables

Issue - State: open - Opened by thespacedoctor 3 months ago
Labels: priority: 2, type: enhancement

#296 - Missing configuration file, and contradicting XShooter filename conventions after a fresh install

Issue - State: closed - Opened by naamach 4 months ago - 4 comments
Labels: priority: 1, type: bug

#295 - Ask Padova team for a set of UVVIS and NIR data at multiple rotation angles once AFC is active

Issue - State: open - Opened by thespacedoctor 4 months ago
Labels: type: admin, priority: 2

#294 - Using the ThAr MPH frames, build the high-quality line-list for the SOXS VIS

Issue - State: open - Opened by thespacedoctor 5 months ago - 1 comment
Labels: priority: 1, type: feature

#293 - Allow for extraction of flat lamp order centre traces for PAE testing

Issue - State: closed - Opened by thespacedoctor 5 months ago - 1 comment
Labels: priority: 1, type: feature

#292 - bootstrap a ArHgNeXe line atlas with the NIR Xenon dispersion solution to generate line-lists for the 4 individual penrays

Issue - State: closed - Opened by thespacedoctor 6 months ago - 1 comment

#291 - Include the logic need to handle nodding data with jitter

Issue - State: closed - Opened by thespacedoctor 6 months ago
Labels: priority: 1, type: feature

#290 - Add excluded regions for a VIS arm of XSH in response_function

Issue - State: closed - Opened by thespacedoctor 7 months ago - 1 comment

#289 - Add option in settings file to toggle the overscan subtraction

Issue - State: open - Opened by thespacedoctor 7 months ago
Labels: type: feature, priority: 3

#288 - Create the SOXS UV-VIS and NIR bad pixel maps

Issue - State: open - Opened by thespacedoctor 7 months ago
Labels: type: enhancement, priority: 3

#287 - Test the April 7, 2024 NIR SOXS data against the data-organiser

Issue - State: closed - Opened by thespacedoctor 7 months ago - 1 comment
Labels: priority: 1, type: investigation

#286 - Have Paolo test NODDING when it has been integrated into the main code

Issue - State: closed - Opened by thespacedoctor 8 months ago - 1 comment
Labels: type: admin, priority: 2

#285 - In the detect continuum make the NODA and NODB output separate QC files

Issue - State: closed - Opened by thespacedoctor 8 months ago - 1 comment
Labels: priority: 2, type: refactor

#284 - tune pipeline parameters separately for each arm

Issue - State: closed - Opened by thespacedoctor 8 months ago - 1 comment
Labels: priority: 1, type: refactor

#283 - read through printed soxspipe design manual and suggest edits

Issue - State: open - Opened by thespacedoctor 8 months ago
Labels: priority: 2, type: docs

#282 - Write a pandoc conversion to move MD to latex for soxs docs - test on mbias

Issue - State: closed - Opened by thespacedoctor 8 months ago
Labels: priority: 1, type: docs

#281 - export the `raw_frames` table to a file at the root of the workspace called raw_frames.txt

Issue - State: open - Opened by thespacedoctor 8 months ago
Labels: type: enhancement, priority: 3

#280 - Logging info getting recorded twice in log files

Issue - State: closed - Opened by thespacedoctor 8 months ago - 1 comment
Labels: priority: 2, type: bug

#279 - Move plotting rotation and image flipping parameters into the advanced settings

Issue - State: closed - Opened by thespacedoctor 9 months ago - 2 comments
Labels: type: enhancement, priority: 3

#278 - Allow for pipeline parameters to be set for each arm individually

Issue - State: closed - Opened by thespacedoctor 9 months ago
Labels: priority: 1, type: enhancement

#277 - Build a folder/sof file of frames and tables needed by the `soxs nod` command

Issue - State: closed - Opened by thespacedoctor 9 months ago - 1 comment

#276 - add placeholder code in soxspipe for `soxs_nodding`

Issue - State: closed - Opened by thespacedoctor 9 months ago - 1 comment

#275 - Using a nodding mode dataset, tune the data-organiser to populate SOF files correctly

Issue - State: closed - Opened by thespacedoctor 9 months ago - 1 comment

#274 - Find a dataset that can be used to develop nodding mode against

Issue - State: closed - Opened by thespacedoctor 9 months ago - 1 comment

#273 - During the creation of the dispersion solution, record all detected arc line fluxes alongside element ID in a QC table

Issue - State: closed - Opened by thespacedoctor 9 months ago - 1 comment
Labels: priority: 2, type: enhancement

#245 - The data-organiser must select a master flat with no blocking filter when building the SOF file for the spatial solution

Issue - State: closed - Opened by thespacedoctor 12 months ago - 1 comment

GitHub / thespacedoctor/soxspipe issues and pull requests