Ecosyste.ms: Issues

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GitHub / the-virtual-brain/tvb-gdist issues and pull requests

#82 - [BUG] Failure to import with numpy 2.0

Issue - State: open - Opened by pbarbarant 7 months ago

#81 - EBR-40 Adjust build and copyright

Pull Request - State: closed - Opened by liadomide 11 months ago - 1 comment

#80 - gdist_local_connectivity asymmetric

Issue - State: closed - Opened by jescab01 11 months ago - 5 comments

#79 - EBR-40 rebuild tvb-gdist with latest versions

Pull Request - State: closed - Opened by liadomide 11 months ago - 1 comment

#77 - TVB-3065: convert travis.yml into github action

Pull Request - State: closed - Opened by rarescodemart about 2 years ago - 1 comment
Labels: enhancement

#76 - Test failure with GCC/Linux on non-x86 architectures at -O2

Issue - State: open - Opened by musicinmybrain about 2 years ago - 2 comments

#75 - add wheels building actions

Pull Request - State: closed - Opened by maedoc about 2 years ago - 9 comments
Labels: enhancement

#74 - Build fails on macOS 12.6

Issue - State: open - Opened by maedoc about 2 years ago - 1 comment

#73 - import fails on install

Issue - State: open - Opened by jaredsagendorf almost 3 years ago

#72 - PyPI wheel installs incorrect architecture for macOS on M1

Issue - State: open - Opened by maedoc almost 3 years ago - 2 comments

#71 - process finished with exit code -1073741819 (0xc0000005)

Issue - State: closed - Opened by JaimeAbella almost 3 years ago - 2 comments
Labels: bug

#70 - Core dumped when computing the geodesic distance of a mesh

Issue - State: open - Opened by dhorka over 3 years ago - 2 comments

#69 - WIP Parallelize gdist calculation

Pull Request - State: open - Opened by maedoc almost 4 years ago - 3 comments

#68 - Return index of closest point for compute_gdist()

Issue - State: closed - Opened by GostInShell about 4 years ago - 2 comments

#67 - TVB-2797 Use --std=c++1y flag instead of c++14

Pull Request - State: closed - Opened by bogdanvalean1 over 4 years ago - 1 comment

#66 - TVB-2719 README: Update distance_matrix_of_selected_points

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 1 comment

#65 - TVB-2719 Add parallelism using OpenMP

Pull Request - State: open - Opened by ayan-b over 4 years ago - 1 comment

#64 - TVB-2719 Add googletest set-up

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 2 comments
Labels: enhancement

#63 - TVB-2719 lint: Use same convention everywhere

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 3 comments
Labels: enhancement

#62 - TVB-2719 .travis.yml: Test on multiple versions of python

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 1 comment
Labels: bug

#61 - Benchmark with different number of cores

Issue - State: open - Opened by ayan-b over 4 years ago

#60 - Lint: Use same convention everywhere

Issue - State: closed - Opened by ayan-b over 4 years ago

#59 - Run different versions of python in windows

Issue - State: closed - Opened by ayan-b over 4 years ago - 1 comment
Labels: bug

#58 - TVB-2719 Add 100% test coverage

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 2 comments

#57 - Improve Code Coverage

Issue - State: closed - Opened by ayan-b over 4 years ago - 2 comments
Labels: enhancement

#56 - TVB-2719 Remove 2 unused .py files

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 2 comments
Labels: enhancement, question

#55 - TVB-2719 Add coverage report functionality

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 1 comment

#54 - TVB-2719 gdist.pyx: New API distance_matrix_of_selected_points

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 2 comments
Labels: enhancement

#53 - TVB-2719 Fix memory leak issue

Pull Request - State: closed - Opened by ayan-b over 4 years ago
Labels: bug

#52 - Add API call for pairwise distance computation

Issue - State: closed - Opened by ayan-b over 4 years ago
Labels: enhancement

#51 - Possible memory leak

Issue - State: closed - Opened by ezemikulan over 4 years ago - 12 comments
Labels: bug

#50 - TVB-2719 Improve documentation

Pull Request - State: closed - Opened by ayan-b over 4 years ago

#49 - TVB-2719 Use OpenMP Parallel

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 2 comments
Labels: enhancement

#48 - TVB-2719 Add ability to specify if faces' vertices are 1-indexed

Pull Request - State: closed - Opened by ayan-b over 4 years ago

#47 - TVB-2719 Add more surface data tests

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 4 comments

#46 - TVB-2719 Test equality with stable

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 2 comments

#45 - Update packaging scripts if ctypes will be used

Issue - State: open - Opened by ayan-b over 4 years ago

#44 - [Ctypes] TVB-2719 Add ability to specify if faces' vertices are 1-indexed

Pull Request - State: open - Opened by ayan-b over 4 years ago - 2 comments

#43 - Add documentation

Issue - State: closed - Opened by ayan-b over 4 years ago
Labels: enhancement

#42 - TVB-2719 Add a macOS job

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 1 comment

#41 - Failing on cortex 2x120k

Issue - State: closed - Opened by ayan-b over 4 years ago - 3 comments
Labels: bug

#40 - [Ctypes] TVB-2719 Use ctypes instead of cython

Pull Request - State: open - Opened by ayan-b over 4 years ago - 7 comments
Labels: enhancement

#39 - TVB-2719 pyproject.toml: Set up minimum build system

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 1 comment
Labels: bug

#38 - TVB-2719 Add local_gdist_matrix tests and fix Bug 21

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 3 comments
Labels: bug

#37 - TVB-2719 Fix build_ext warnings

Pull Request - State: closed - Opened by ayan-b over 4 years ago - 2 comments
Labels: enhancement

#36 - Add Coverage report

Issue - State: closed - Opened by ayan-b almost 5 years ago - 1 comment
Labels: enhancement

#35 - TVB-2719 Add a gdist test

Pull Request - State: closed - Opened by ayan-b almost 5 years ago - 1 comment

#34 - Add a basic cpp test

Pull Request - State: closed - Opened by ayan-b almost 5 years ago - 2 comments

#33 - Use unique_ptr instead of auto_ptr

Pull Request - State: closed - Opened by ayan-b almost 5 years ago - 5 comments

#32 - Fix travis badge link

Pull Request - State: closed - Opened by ayan-b almost 5 years ago

#31 - Test on Windows as well

Pull Request - State: closed - Opened by ayan-b almost 5 years ago

#30 - TVB-2523 Fix dist removal

Pull Request - State: closed - Opened by bogdanvalean1 almost 5 years ago

#29 - TVB-2523 Fix gdist build for windows

Pull Request - State: closed - Opened by bogdanvalean1 almost 5 years ago

#28 - Add missing files in geodesic_library

Pull Request - State: closed - Opened by ayan-b almost 5 years ago

#27 - Modernize travis syntax and add a basic test

Pull Request - State: closed - Opened by ayan-b almost 5 years ago

#26 - Lint fixes

Pull Request - State: closed - Opened by ayan-b almost 5 years ago - 1 comment

#25 - .gitignore: Add Python and C++ gitignore

Pull Request - State: closed - Opened by ayan-b almost 5 years ago - 1 comment

#24 - setup.py: Use precise URL

Pull Request - State: closed - Opened by jayvdb about 5 years ago

#23 - HTTPS cert issues

Issue - State: closed - Opened by jayvdb about 5 years ago - 1 comment

#22 - Crash on small meshes

Issue - State: closed - Opened by dvirginz over 5 years ago - 5 comments
Labels: bug

#21 - local distances return faulty output

Issue - State: closed - Opened by sina-mansour almost 6 years ago - 1 comment
Labels: bug

#20 - Python3 support

Issue - State: closed - Opened by sanjayankur31 about 6 years ago - 3 comments

#19 - Numpy requirement in setup is causing installation problems

Issue - State: closed - Opened by ATajadod94 over 6 years ago - 11 comments
Labels: bug

#18 - Added debian directory for building from source

Pull Request - State: open - Opened by umarbrowser over 6 years ago - 1 comment

#17 - added debian directory

Pull Request - State: closed - Opened by umarbrowser over 6 years ago - 7 comments

#15 - Fix No such file or directory: 'gdist.cpp issue #12

Pull Request - State: closed - Opened by umarbrowser almost 7 years ago - 1 comment

#14 - licensing

Issue - State: closed - Opened by djsutherland over 7 years ago - 2 comments

#13 - Update license text

Pull Request - State: closed - Opened by liadomide almost 8 years ago

#12 - PyPI wheels for common architectures

Issue - State: closed - Opened by maedoc almost 8 years ago - 3 comments

#11 - Commit C source [ctypes]

Issue - State: open - Opened by maedoc almost 8 years ago - 3 comments
Labels: enhancement

#10 - Use Cython parallel

Issue - State: open - Opened by maedoc about 8 years ago - 2 comments

#9 - include <algorithm> in geodesic_library/geodesic_mesh_elements.h to make it compile with VS2015

Pull Request - State: closed - Opened by ti-go over 8 years ago - 2 comments

#8 - Improve setup.py

Pull Request - State: closed - Opened by andreabedini over 8 years ago - 16 comments

#7 - Debian package

Pull Request - State: closed - Opened by maedoc over 10 years ago

#6 - Create Debian package

Issue - State: closed - Opened by maedoc over 10 years ago - 1 comment

#5 - PyPI-ify the geodesic library

Pull Request - State: closed - Opened by maedoc about 11 years ago

#4 - Windows installers

Issue - State: closed - Opened by maedoc about 11 years ago - 2 comments

#3 - PyPI

Pull Request - State: closed - Opened by maedoc about 11 years ago

#2 - Submit to PyPI

Issue - State: closed - Opened by maedoc about 11 years ago - 2 comments

#1 - `assert` in C++ causes Python to crash

Issue - State: closed - Opened by maedoc over 11 years ago - 1 comment