Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / tee-ar-ex/trx-python issues and pull requests

#82 - New release

Issue - State: closed - Opened by frheault 16 days ago - 2 comments

#81 - Bug when building the zipfile using CLIs (zip, jar, etc)

Pull Request - State: closed - Opened by frheault 2 months ago

#80 - Update minimum setuptools_scm to version 7

Pull Request - State: closed - Opened by musicinmybrain 3 months ago - 1 comment

#79 - Documentation examples

Issue - State: open - Opened by arokem 4 months ago - 1 comment
Labels: documentation

#78 - Fix shebangs and file mode

Pull Request - State: closed - Opened by penguinpee 4 months ago - 1 comment

#77 - strange behavior for `intersection`

Issue - State: open - Opened by skoudoro 6 months ago - 1 comment

#76 - tff_generate_trx_from_scratch.py: fix typo.

Pull Request - State: closed - Opened by emollier 6 months ago

#75 - Move setuptools_scm to be a setup requirement, instead of installation.

Pull Request - State: closed - Opened by arokem 7 months ago - 2 comments

#73 - setuptools_scm shouldn't be in the runtime dependency list

Issue - State: open - Opened by yurivict 7 months ago - 4 comments

#72 - Rename the confusing object name TrxFile ?

Issue - State: open - Opened by skoudoro 7 months ago - 3 comments

#71 - new tests

Pull Request - State: closed - Opened by frheault 9 months ago - 1 comment

#70 - New test to match Dipy potential issue with sft copy

Pull Request - State: closed - Opened by frheault 9 months ago

#69 - Manual close of all memmap BEFORE cleanup

Pull Request - State: closed - Opened by frheault 9 months ago

#68 - Try_except with warning

Pull Request - State: closed - Opened by frheault 9 months ago - 10 comments

#67 - Add close statement

Pull Request - State: closed - Opened by frheault 9 months ago

#66 - Manual cleanup to go around Windows errors

Pull Request - State: closed - Opened by frheault 9 months ago

#65 - Remove circular setup

Pull Request - State: closed - Opened by frheault 9 months ago

#64 - Remove custom install with Dipy

Pull Request - State: closed - Opened by frheault 9 months ago

#61 - Adding CI in other OS

Issue - State: closed - Opened by arokem 9 months ago - 1 comment

#60 - Thoughts on storing data with tabular file formats?

Issue - State: closed - Opened by psadil 12 months ago

#59 - Trx integration to Dipy (part 2)

Pull Request - State: closed - Opened by frheault about 1 year ago - 10 comments

#58 - Update pyproject.toml

Pull Request - State: closed - Opened by Eliyahou about 1 year ago - 1 comment

#57 - Add an installation from a specific fork/commit.

Pull Request - State: closed - Opened by arokem about 1 year ago - 16 comments

#56 - Where is numpy dependency?

Issue - State: closed - Opened by skoudoro about 1 year ago - 1 comment

#55 - fix_url

Pull Request - State: closed - Opened by frheault about 1 year ago

#54 - format classifier

Pull Request - State: closed - Opened by frheault about 1 year ago

#53 - Always use latest ubuntu in GA.

Pull Request - State: closed - Opened by arokem about 1 year ago

#52 - (WIP) trx_integration

Pull Request - State: closed - Opened by frheault about 1 year ago

#51 - Circular Dependency for DIPY ?

Issue - State: open - Opened by skoudoro over 1 year ago - 18 comments

#50 - (WIP) TRX integration to Scilpy

Pull Request - State: closed - Opened by frheault over 1 year ago - 2 comments

#49 - MAINT: Attempts to resolve issues with pushes to test pypi.

Pull Request - State: closed - Opened by arokem over 1 year ago - 1 comment

#48 - Install setuptools_scm as a requirement for setup.

Pull Request - State: closed - Opened by arokem over 1 year ago - 2 comments

#47 - (WIP) Fixing Sphinx Doc autobuild

Pull Request - State: closed - Opened by frheault over 1 year ago

#46 - MAINT: For non-tags, this patches in a testpypi-compliant version.

Pull Request - State: closed - Opened by arokem over 1 year ago

#45 - create TRX from LazyTractogram or Generator

Pull Request - State: closed - Opened by frheault over 1 year ago - 5 comments
Labels: enhancement

#44 - Control tmpdir for files

Pull Request - State: closed - Opened by frheault over 1 year ago - 8 comments
Labels: enhancement

#43 - Use numpy doc standard

Issue - State: open - Opened by arokem over 1 year ago
Labels: good first issue

#42 - DOC: Update the readme, with a link to the documentation web-page.

Pull Request - State: closed - Opened by arokem over 1 year ago

#41 - CI: Adds an action to upload to PYPI when a tag/version is pushed.

Pull Request - State: closed - Opened by arokem over 1 year ago

#40 - Give user control about where temporary data is saved

Issue - State: closed - Opened by arokem almost 2 years ago - 1 comment

#39 - Allow other types into `append`

Issue - State: open - Opened by arokem almost 2 years ago - 1 comment
Labels: good first issue

#38 - OHBM 2022: Summary

Issue - State: closed - Opened by frheault almost 2 years ago - 1 comment

#37 - Additional script for tractogram

Pull Request - State: closed - Opened by frheault almost 2 years ago - 1 comment
Labels: enhancement

#36 - Documentation and changes to installation/maintenance infrastructure

Pull Request - State: closed - Opened by arokem about 2 years ago - 10 comments

#35 - Data validation

Issue - State: open - Opened by Lestropie about 2 years ago - 1 comment

#34 - [ENH] Moving test data to figshare

Pull Request - State: closed - Opened by anibalsolon about 2 years ago

#33 - Saving offsets with N+1 elements

Pull Request - State: closed - Opened by frheault about 2 years ago - 3 comments

#32 - Generate trx from scratch

Pull Request - State: closed - Opened by frheault about 2 years ago - 14 comments

#31 - Removes the CPP implementation, which has been moved to its own repo.

Pull Request - State: closed - Opened by arokem about 2 years ago - 2 comments

#30 - Revert "Adds the rationale/spec document from Google Docs."

Pull Request - State: closed - Opened by arokem about 2 years ago

#29 - Transfer of specifications

Pull Request - State: closed - Opened by frheault about 2 years ago

#28 - Trying to resolve conflicts in cpp branch

Pull Request - State: closed - Opened by arokem about 2 years ago - 3 comments

#27 - Architectures change for Python only library

Pull Request - State: closed - Opened by frheault about 2 years ago - 2 comments

#26 - Use click for CLIs?

Issue - State: open - Opened by arokem about 2 years ago

#25 - Move test data to more stable location

Issue - State: closed - Opened by arokem about 2 years ago - 5 comments

#24 - Rename "tractography_file_format" to "trx"

Issue - State: closed - Opened by arokem about 2 years ago - 5 comments

#23 - Segmentation fault for Apple Silicon M1 CPU

Issue - State: open - Opened by neurolabusc about 2 years ago - 32 comments

#22 - New scripts for conversion, comparison and testing

Pull Request - State: closed - Opened by frheault over 2 years ago - 5 comments

#21 - NPY file format for regular matrix data

Issue - State: open - Opened by Lestropie over 2 years ago - 3 comments

#20 - Reference datasets

Issue - State: closed - Opened by neurolabusc over 2 years ago - 26 comments

#19 - Test coverage

Issue - State: open - Opened by arokem over 2 years ago
Labels: good first issue, Python, CI

#18 - Tests and CI

Pull Request - State: closed - Opened by arokem over 2 years ago

#17 - Implications of compression algorithms

Issue - State: open - Opened by DanNBullock over 2 years ago - 3 comments

#16 - Benchmark against faster Python trk loader

Issue - State: open - Opened by arokem over 2 years ago - 14 comments

#15 - Beginnings of a CPP implementation

Pull Request - State: closed - Opened by ValHayot over 2 years ago - 9 comments

#14 - Some MRTrix desiderata for C++ implementation

Issue - State: closed - Opened by arokem over 2 years ago - 1 comment

#13 - [WIP] Documentation, Test cases and CI for trx_file_memmap

Pull Request - State: closed - Opened by ValHayot over 2 years ago - 2 comments

#12 - What is this for?

Issue - State: closed - Opened by arokem almost 3 years ago - 2 comments

#11 - Adds the rationale/spec document from Google Docs.

Pull Request - State: closed - Opened by arokem over 3 years ago - 8 comments

#10 - Header: Choice of file format

Issue - State: open - Opened by Lestropie over 3 years ago - 3 comments

#9 - Extra header files for non-compulsory data

Issue - State: open - Opened by Lestropie over 3 years ago - 2 comments

#8 - Data compression

Issue - State: open - Opened by Lestropie over 3 years ago - 7 comments

#7 - Invalid streamlines for software

Issue - State: open - Opened by frheault over 3 years ago - 7 comments

#6 - Online Meeting

Issue - State: closed - Opened by skoudoro over 3 years ago - 8 comments

#5 - "Point" vs. "Vertex"

Issue - State: open - Opened by Lestropie over 3 years ago - 7 comments

#4 - Endianness

Issue - State: open - Opened by Lestropie over 3 years ago - 6 comments

#3 - Bitwise data / groups

Issue - State: open - Opened by Lestropie over 3 years ago - 2 comments

#2 - Reserved key for streamline seed point?

Issue - State: open - Opened by Lestropie over 3 years ago - 1 comment

#1 - Community file-format technological survey discussion

Issue - State: open - Opened by frheault over 3 years ago - 10 comments