Ecosyste.ms: Issues

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GitHub / teamtomo/fidder issues and pull requests

#37 - Prediction gets stuck

Issue - State: open - Opened by hamid13r 4 months ago - 8 comments

#36 - fidder抓取app

Issue - State: closed - Opened by 77599 5 months ago - 3 comments

#35 - Erase features in 3D from 3D mask

Pull Request - State: open - Opened by brisvag 5 months ago - 3 comments

#34 - Fix bug in local_mean my using min instead of comparison

Pull Request - State: closed - Opened by brisvag 5 months ago

#33 - About current state and possible integration in Scipion

Issue - State: closed - Opened by JorMaister 6 months ago - 4 comments

#32 - DistBackendError:NCCL error when running fidder predict

Issue - State: closed - Opened by fg1215 about 1 year ago - 2 comments

#31 - Write the erased image in the data type of the input image

Issue - State: closed - Opened by dmichalak over 1 year ago - 4 comments

#30 - running Fidder on raw frames from tilt series

Issue - State: closed - Opened by karine-jan over 1 year ago - 1 comment

#29 - Add micrograph stack support to predict and erase CLIs

Pull Request - State: closed - Opened by alisterburt over 1 year ago - 6 comments

#28 - add support for tilt-series

Issue - State: closed - Opened by alisterburt over 1 year ago

#27 - some issue with float32 being required

Issue - State: closed - Opened by alisterburt over 1 year ago - 1 comment

#26 - load model onto cpu first by default

Pull Request - State: closed - Opened by alisterburt over 1 year ago

#24 - Add non-vectorised code path to pixel count map generation

Pull Request - State: closed - Opened by alisterburt over 1 year ago

#23 - add compatibility for pytorch 2.0 and pytorch-lightning 2.0

Pull Request - State: closed - Opened by alisterburt over 1 year ago

#22 - Using another trained model

Issue - State: closed - Opened by hamid13r almost 2 years ago - 5 comments

#21 - add notes about cuda 10.X compatibility

Pull Request - State: closed - Opened by alisterburt almost 2 years ago

#20 - remove python 3.11 tests

Pull Request - State: closed - Opened by alisterburt almost 2 years ago

#19 - Remove reference to TF.get_dimensions for compatibility

Pull Request - State: closed - Opened by alisterburt almost 2 years ago

#18 - Remove windows and macos tests from testing matrix and add python=3.11

Pull Request - State: closed - Opened by alisterburt almost 2 years ago

#17 - Fidder for older PyTorch versions

Issue - State: closed - Opened by cyanching almost 2 years ago - 6 comments

#16 - Retrained with new data 21/02/23

Pull Request - State: closed - Opened by alisterburt almost 2 years ago

#15 - update referencce to training data on zenodo

Pull Request - State: closed - Opened by alisterburt almost 2 years ago

#14 - Suboptimal performance

Issue - State: closed - Opened by JulienMaufront almost 2 years ago - 8 comments

#12 - add refs to BoxNet/Warp in README/docs

Pull Request - State: closed - Opened by alisterburt about 2 years ago

#11 - fix broken link in readme

Pull Request - State: closed - Opened by alisterburt about 2 years ago

#10 - update readme for release

Pull Request - State: closed - Opened by alisterburt about 2 years ago

#9 - Retrain 6th December 2022

Pull Request - State: closed - Opened by alisterburt about 2 years ago

#8 - Use pre-downsampled training data

Pull Request - State: closed - Opened by alisterburt about 2 years ago

#7 - prediction mask threshold API change and doc update

Pull Request - State: closed - Opened by alisterburt about 2 years ago

#6 - Initial docs

Pull Request - State: closed - Opened by alisterburt about 2 years ago

#5 - GHIFS

Issue - State: open - Opened by alisterburt about 2 years ago - 1 comment

#4 - Remove pip cache and fix tests to get CI running

Pull Request - State: closed - Opened by alisterburt about 2 years ago

#3 - fix erase fiducials tests

Pull Request - State: closed - Opened by alisterburt about 2 years ago

#2 - rename erasing tests

Pull Request - State: closed - Opened by alisterburt about 2 years ago

#1 - add CI

Pull Request - State: closed - Opened by alisterburt about 2 years ago