Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / tanjimin/C.Origami issues and pull requests
#49 - GRAM importance score
Issue -
State: open - Opened by thomas-reimonn about 1 month ago
- 2 comments
#48 - Issues with Training the C.Origami Model Using Only Sequence Data and Integrating Multi-Species Data
Issue -
State: open - Opened by hanshandong2024 about 1 month ago
- 4 comments
#47 - Issues with Training the C.Origami Model Using Only Sequence Data and Integrating Multi-Species Data
Issue -
State: closed - Opened by hanshandong2024 about 1 month ago
#46 - Training and prediction at 5kb resolution
Issue -
State: closed - Opened by zhang-jiankun about 1 month ago
- 2 comments
#45 - Reverse-compliment probably patch
Pull Request -
State: closed - Opened by kaboroevich about 2 months ago
- 1 comment
#44 - Reverse-compliment probably patch
Pull Request -
State: closed - Opened by kaboroevich about 2 months ago
#43 - Independant chance of returning sequence complement
Issue -
State: closed - Opened by kaboroevich about 2 months ago
- 4 comments
#42 - A problem in the PositionalEncoding model code
Issue -
State: open - Opened by kir1to455 4 months ago
- 3 comments
#41 - Adding different ChIP-seq during the training phase ?
Issue -
State: closed - Opened by kir1to455 4 months ago
- 1 comment
#40 - How to makr trans interaction contacts prediction?
Issue -
State: closed - Opened by linfanxiao 4 months ago
- 5 comments
#39 - insulation score
Issue -
State: open - Opened by wawpaopao 5 months ago
- 5 comments
#38 - reproduce
Issue -
State: open - Opened by wawpaopao 5 months ago
- 4 comments
#37 - Using CTCF chip-exo without input
Issue -
State: closed - Opened by re2srm 6 months ago
- 5 comments
#36 - How to balance mcool files.
Issue -
State: open - Opened by 1944498970 7 months ago
- 1 comment
#35 - Single-cell ATACseq adaptability
Issue -
State: open - Opened by archieandrews10 7 months ago
- 1 comment
#34 - What method was used in the paper to convert the predictions into valid pairs?
Issue -
State: open - Opened by rebeccaronai 7 months ago
- 1 comment
#33 - Update screening.py
Pull Request -
State: closed - Opened by tanjimin 8 months ago
#32 - The pre-trained models of other cell types
Issue -
State: open - Opened by lhy0322 9 months ago
- 1 comment
#31 - About comparison with Original HiC matrix
Issue -
State: open - Opened by ahmedabbas811 about 1 year ago
- 3 comments
#30 - Questions about performance comparison with deepC
Issue -
State: closed - Opened by My-laniaKeA about 1 year ago
- 2 comments
#29 - Request for evaluation code
Issue -
State: closed - Opened by My-laniaKeA about 1 year ago
- 2 comments
#28 - `examples/prediction.sh` generates blank Hi-C image for chromosome 15
Issue -
State: closed - Opened by My-laniaKeA about 1 year ago
- 2 comments
#27 - How to merge the predicted matrix and convert it back to valid pairs ?
Issue -
State: closed - Opened by YCMaCY over 1 year ago
- 2 comments
#26 - Can C.Origami predict the 3D chromatin with out CTCF ChIP-seq input data?
Issue -
State: closed - Opened by YCMaCY over 1 year ago
- 4 comments
#25 - Question about downscaling 10-kb matrix to 8192 bp resolution
Issue -
State: closed - Opened by zhang-jiankun over 1 year ago
- 4 comments
#24 - Adding chromosome-wide prediction
Issue -
State: open - Opened by tanjimin over 1 year ago
- 6 comments
Labels: enhancement
#23 - Questions when I process the Hi-C data
Issue -
State: closed - Opened by YCMaCY over 1 year ago
- 3 comments
#22 - Could HiC-data be replaced by HiC-data generated by other comformation capture experiments like HiChIP or ChIA-PET?
Issue -
State: closed - Opened by Gemma-Zhang-326 over 1 year ago
- 2 comments
#20 - Update README.md
Pull Request -
State: closed - Opened by tanjimin over 1 year ago
#19 - Merge changes from main
Pull Request -
State: closed - Opened by tanjimin over 1 year ago
#18 - Wrong file download link
Issue -
State: closed - Opened by rozyangno over 1 year ago
- 1 comment
#17 - Merge from main
Pull Request -
State: closed - Opened by tanjimin over 1 year ago
#15 - Merge from main
Pull Request -
State: closed - Opened by tanjimin over 1 year ago
#13 - Merge
Pull Request -
State: closed - Opened by tanjimin over 1 year ago
#12 - Added training instructions (#10)
Pull Request -
State: closed - Opened by tanjimin over 1 year ago
#11 - Added training instructions (#10)
Pull Request -
State: closed - Opened by ninashenker over 1 year ago
#10 - Train
Pull Request -
State: closed - Opened by ninashenker over 1 year ago
#9 - Dev rebase
Pull Request -
State: closed - Opened by tanjimin over 1 year ago
#8 - Merge pull request #6 from tanjimin/dev
Pull Request -
State: closed - Opened by tanjimin over 1 year ago
#7 - Merge pull request #6 from tanjimin/dev
Pull Request -
State: closed - Opened by tanjimin over 1 year ago
#6 - Dev merge
Pull Request -
State: closed - Opened by tanjimin over 1 year ago
#5 - First release
Pull Request -
State: closed - Opened by tanjimin almost 2 years ago
#4 - command line interface added
Pull Request -
State: closed - Opened by ninashenker almost 2 years ago
#3 - Imgs added
Pull Request -
State: closed - Opened by ninashenker almost 2 years ago
#2 - Tutorial
Pull Request -
State: closed - Opened by ninashenker almost 2 years ago
#1 - cleaned up code
Pull Request -
State: closed - Opened by ninashenker almost 2 years ago