tallamjr/astronet issues and pull requests

#99 - Minor modifications in relation to viva corrections

Issue - State: open - Opened by tallamjr over 1 year ago

#98 - Update functionality to allow for processing of ELAsTiCC data

Issue - State: open - Opened by tallamjr about 2 years ago
Labels: 2 - enhancement

#97 - Issues/96/mmap

Pull Request - State: closed - Opened by tallamjr over 2 years ago - 1 comment

#96 - Lazy loading of large numpy data files

Issue - State: closed - Opened by tallamjr over 2 years ago
Labels: 2 - enhancement, 1 - tests, 1 - refactor

#95 - Issues/94/xdist fixtures

Pull Request - State: closed - Opened by tallamjr over 2 years ago - 1 comment

#94 - Fix pytest-xdist with session-scoped fixture

Issue - State: closed - Opened by tallamjr over 2 years ago
Labels: 1 - tests, 1 - refactor, 4 - back-burner

#93 - Rearrange folder structure for `tinho` in own dir

Pull Request - State: closed - Opened by tallamjr over 2 years ago - 1 comment

#92 - MINOR: Refactor code layout now that a "new" kind of model exists: `tinho`

Issue - State: closed - Opened by tallamjr over 2 years ago
Labels: 1 - tests, 1 - refactor

#91 - Hardware accelerated distributed training + Lightweight models via deep compression

Pull Request - State: closed - Opened by tallamjr over 2 years ago - 1 comment

#90 - Fix multi-gpu training

Issue - State: closed - Opened by tallamjr over 2 years ago - 1 comment
Labels: 1 - bug, 2 - enhancement

#89 - Apply model compression techniques for improved throughput

Issue - State: closed - Opened by tallamjr over 2 years ago
Labels: 2 - enhancement, 2 - feature

#88 - Arm development branch

Pull Request - State: closed - Opened by tallamjr over 2 years ago

#87 - [META] Road to `v1.0.0`

Issue - State: open - Opened by tallamjr almost 3 years ago
Labels: 3 - documentation, 1 - tests, 1 - refactor, 4 - back-burner

#86 - [RFC] Improve data reformatting pipeline

Issue - State: open - Opened by tallamjr almost 3 years ago
Labels: 2 - enhancement, 4 - back-burner

#85 - Issues/84/atx fink

Pull Request - State: closed - Opened by tallamjr almost 3 years ago - 1 comment

#84 - Experiment with `atx` for FINK

Issue - State: closed - Opened by tallamjr almost 3 years ago - 1 comment
Labels: 3 - plasticc, 2 - feature

#83 - Issues/69/refactor

Pull Request - State: closed - Opened by tallamjr almost 3 years ago - 1 comment

#82 - Issues/81/finkmod

Pull Request - State: closed - Opened by tallamjr almost 3 years ago

#81 - Broker integration

Issue - State: closed - Opened by tallamjr almost 3 years ago - 1 comment

#80 - Issues/78/run atx

Pull Request - State: closed - Opened by tallamjr almost 3 years ago

#79 - Compare runtimes of `atx` vs `t2`

Issue - State: closed - Opened by tallamjr almost 3 years ago - 4 comments
Labels: 2 - enhancement, 3 - plasticc

#78 - Run `atx` on Myriad

Issue - State: closed - Opened by tallamjr almost 3 years ago
Labels: 2 - cloud, 2 - feature

#77 - Re-implement GPs

Issue - State: closed - Opened by tallamjr almost 3 years ago - 2 comments
Labels: 2 - enhancement, 1 - tests, 1 - refactor, 4 - back-burner

#76 - Optimize for accuracy for MTS comparison

Issue - State: closed - Opened by tallamjr over 3 years ago - 2 comments

#75 - Issues/68/clean cam violin

Pull Request - State: closed - Opened by tallamjr over 3 years ago - 2 comments

#74 - Issues/67/ablation pos

Pull Request - State: closed - Opened by tallamjr over 3 years ago - 1 comment

#73 - Issues/72/without z

Pull Request - State: closed - Opened by tallamjr over 3 years ago - 1 comment

#72 - Run without redshift

Issue - State: closed - Opened by tallamjr over 3 years ago - 1 comment

#71 - Issues/70/concat lm

Pull Request - State: closed - Opened by tallamjr over 3 years ago - 1 comment

#70 - Re-do concatenation of features to L or M before Conv layer

Issue - State: closed - Opened by tallamjr over 3 years ago - 1 comment

#69 - Clean codebase

Issue - State: closed - Opened by tallamjr over 3 years ago - 2 comments
Labels: 3 - documentation, 2 - enhancement, 2 - continuous integration, 1 - tests, 1 - refactor, 2 - feature

#68 - Clean CAM code

Issue - State: closed - Opened by tallamjr over 3 years ago - 2 comments
Labels: 2 - enhancement, 1 - tests, 1 - refactor

#67 - Conduct ablation studies

Issue - State: closed - Opened by tallamjr over 3 years ago - 2 comments
Labels: 2 - enhancement, 1 - refactor, 2 - feature

#66 - Issues/65/plasticc full

Pull Request - State: closed - Opened by tallamjr over 3 years ago - 2 comments

#65 - Create dataset for full set of transients in PLAsTiCC dataset

Issue - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 2 - enhancement, 3 - plasticc, 1 - refactor

#64 - Explainability with class activation maps and addition of augmented data

Pull Request - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 2 - enhancement, 3 - plasticc, 1 - refactor, 2 - feature

#63 - Improve plots for explainability of `t2` model and the attention mechanism

Issue - State: closed - Opened by tallamjr almost 4 years ago
Labels: 3 - documentation, 2 - enhancement, 2 - feature

#62 - Expand hyperparameter space of `t2` model

Issue - State: closed - Opened by tallamjr almost 4 years ago
Labels: 2 - enhancement, 2 - continuous integration, 1 - tests

#61 - Add Z features to model just before FC layer

Pull Request - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 2 - enhancement, 1 - refactor, 2 - feature

#60 - Include `pool_size` as hyperparameter to optimise over

Issue - State: closed - Opened by tallamjr almost 4 years ago - 1 comment

#59 - SupernovaXception model with MTS benchmark evaluation results

Pull Request - State: closed - Opened by tallamjr almost 4 years ago
Labels: 2 - enhancement, 3 - plasticc, 2 - cloud, 1 - tests, 1 - refactor, 2 - feature

#58 - [MAJOR] Implement snX: Supernova Xception

Issue - State: closed - Opened by tallamjr almost 4 years ago - 3 comments
Labels: 2 - enhancement, 2 - feature

#57 - Optimal batch size

Pull Request - State: closed - Opened by tallamjr almost 4 years ago - 1 comment

#56 - AttributeError: module 'tensorflow._api.v2.experimental' has no attribute 'numpy'

Issue - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 1 - bug

#55 - Determine optimal mini batch size

Issue - State: closed - Opened by tallamjr almost 4 years ago - 2 comments
Labels: 1 - refactor

#54 - Custom loss function error: TypeError: init() takes from 1 to 2 positional arguments but 3 were given

Issue - State: closed - Opened by tallamjr almost 4 years ago - 2 comments
Labels: 1 - bug

#53 - Refactor how to load datasets

Issue - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 1 - tests, 1 - refactor

#52 - [BENCHMARK] Compare results to `dl-4-tsc` on the MTS dataset

Issue - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 2 - enhancement, 1 - refactor, 2 - feature

#51 - Add functionality to compare results against Fawaz et al.

Issue - State: closed - Opened by tallamjr almost 4 years ago
Labels: 2 - enhancement, 1 - tests, 1 - refactor

#50 - Add callbacks and reconfigure train/test splits

Pull Request - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 3 - plasticc, 1 - tests, 1 - refactor, 2 - feature

#49 - Use Codecov action to publish report to codecov.io

Pull Request - State: closed - Opened by tallamjr almost 4 years ago
Labels: 2 - continuous integration

#48 - Add Codecov report via Github actions

Issue - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 2 - cloud, 2 - continuous integration, 1 - tests

#47 - Add callbacks to monitor training progress and prevent overfitting

Issue - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 2 - enhancement, 1 - tests, 2 - feature

#46 - Stack encoders to form Vaswani et al. Nx6 architecture

Pull Request - State: closed - Opened by tallamjr almost 4 years ago

#45 - Visualise Self-Attention weights response

Issue - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 2 - enhancement, 2 - feature

#44 - [BENCHMARK] Compare results to `snmachine`

Issue - State: closed - Opened by tallamjr almost 4 years ago - 3 comments
Labels: 3 - plasticc

#43 - Refactor `def train_val_test_split(df, cols):` to be more configurable

Issue - State: closed - Opened by tallamjr almost 4 years ago
Labels: 2 - enhancement, 1 - tests, 1 - refactor, 2 - feature

#42 - Issues/41/wlogloss keras object

Pull Request - State: closed - Opened by tallamjr almost 4 years ago
Labels: 1 - tests, 1 - refactor

#41 - Reimplement custom log loss as a tf.keras object

Issue - State: closed - Opened by tallamjr almost 4 years ago
Labels: 2 - enhancement, 1 - tests, 1 - refactor

#40 - Issues/36/position encoding

Pull Request - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 2 - enhancement, 2 - feature

#39 - Evaluation notebook

Issue - State: closed - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 2 - enhancement, 2 - feature

#38 - Revisit implementation of Multi-head attention

Issue - State: open - Opened by tallamjr almost 4 years ago - 1 comment
Labels: 2 - continuous integration, 1 - tests, 1 - refactor, 4 - back-burner

#37 - Stack Encoding Layers to be in line with Vaswani paper

Issue - State: closed - Opened by tallamjr almost 4 years ago - 2 comments
Labels: 2 - enhancement, 1 - refactor

#36 - [MR/35] Implement `PositionalEncoding` class

Issue - State: closed - Opened by tallamjr about 4 years ago - 3 comments
Labels: 2 - enhancement, 1 - tests, 1 - refactor, 2 - feature

#35 - [MAJOR] Revisit model architecture

Issue - State: closed - Opened by tallamjr about 4 years ago
Labels: 3 - documentation, 2 - enhancement, 3 - question, 1 - tests, 1 - refactor

#34 - Fix Issues/30/wlogloss

Pull Request - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 3 - plasticc, 2 - feature

#33 - Investigate large window size, timesteps=100; steps=100

Issue - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 2 - enhancement, 3 - plasticc

#32 - Balance classes with GP augmentation

Issue - State: closed - Opened by tallamjr about 4 years ago
Labels: 2 - enhancement, 3 - plasticc, 2 - feature

#31 - Add redshift information to model

Issue - State: closed - Opened by tallamjr about 4 years ago - 2 comments
Labels: 2 - enhancement, 3 - plasticc, 2 - feature

#30 - Re-train PLAsTiCC model with 'weighted' Log-Loss metric and loss for optimisation

Issue - State: closed - Opened by tallamjr about 4 years ago - 2 comments
Labels: 3 - documentation, 2 - enhancement, 3 - plasticc, 1 - tests, 1 - refactor

#29 - Hyperparameter optimisation tuning using validation set instead of test set

Pull Request - State: closed - Opened by tallamjr about 4 years ago

#28 - Redefine a single place for files to refer to. `asnwd`

Pull Request - State: closed - Opened by tallamjr about 4 years ago - 1 comment

#27 - Reference to other files within code is all relative to the file being run

Issue - State: closed - Opened by tallamjr about 4 years ago
Labels: 1 - refactor

#26 - Update results and analysis with hyperparamters tuned on validation set instead of test

Issue - State: closed - Opened by tallamjr about 4 years ago
Labels: 1 - bug, 2 - cloud, 1 - refactor

#25 - Add ability to run analysis on the PLAsTiCC data

Pull Request - State: closed - Opened by tallamjr about 4 years ago - 1 comment

#24 - Update docstrings

Issue - State: open - Opened by tallamjr about 4 years ago - 1 comment
Labels: 3 - documentation

#23 - Gaussian process interpolation code for loading PLAsTiCC dataset

Pull Request - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 2 - enhancement, 1 - tests, 2 - feature

#22 - Puts together a mini analysis pipeline notebook explaining steps

Pull Request - State: closed - Opened by tallamjr about 4 years ago - 1 comment

#21 - [feature/20/plasticc] Investigate options for Gaussian Process regression for PLAsTiCC data

Issue - State: closed - Opened by tallamjr about 4 years ago - 2 comments
Labels: 2 - feature

#20 - [FEATURE] Add code for running analysis on PLAsTiCC dataset

Issue - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 3 - documentation, 2 - enhancement, 1 - tests, 2 - feature

#19 - Add argparse functionality

Pull Request - State: closed - Opened by tallamjr about 4 years ago

#18 - Issues/7/hypatia opt

Pull Request - State: closed - Opened by tallamjr about 4 years ago

#17 - Allow for command line arguments to be passed to run analysis on different datasets

Issue - State: closed - Opened by tallamjr about 4 years ago
Labels: 2 - enhancement, 1 - refactor

#16 - Incorporate T2-Analysis-Pipeline.ipynb notebook into CI

Issue - State: closed - Opened by tallamjr about 4 years ago
Labels: 3 - documentation, 2 - enhancement, 2 - continuous integration, 1 - tests

#15 - Issues/6/pipeline notebook

Pull Request - State: closed - Opened by tallamjr about 4 years ago

#14 - Move loading of WISDM dataset into single location

Pull Request - State: closed - Opened by tallamjr about 4 years ago - 1 comment

#13 - Issues/11/visuals

Pull Request - State: closed - Opened by tallamjr about 4 years ago - 1 comment

#12 - Refactor loading of WISDM dataset

Issue - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 2 - enhancement, 1 - refactor

#11 - Complete `visuals.py`

Issue - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 2 - enhancement

#10 - Issues/5/evaluate

Pull Request - State: closed - Opened by tallamjr about 4 years ago

#9 - Issues/8/test cov

Pull Request - State: closed - Opened by tallamjr about 4 years ago
Labels: 2 - continuous integration, 1 - tests

#8 - Add test coverage

Issue - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 1 - tests

#7 - Run hyperparameter optimisation on Hypatia

Issue - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 2 - enhancement, 2 - cloud, 2 - continuous integration

#6 - Have a pipeline notebook - `T2-Analysis-Pipeline.ipynb`

Issue - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 2 - enhancement, 2 - continuous integration

#5 - Complete `evaluate.py` file

Issue - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 2 - enhancement

#4 - Set up CI pipeline

Issue - State: closed - Opened by tallamjr about 4 years ago - 1 comment
Labels: 2 - continuous integration, 1 - tests

#3 - Move towards using Keras subclass API

Pull Request - State: closed - Opened by tallamjr about 4 years ago

#2 - Cleaned up notebook with completed run for WISDM-2019

Pull Request - State: closed - Opened by tallamjr over 4 years ago - 1 comment

#1 - Preliminary notebook for t2 proof of concept analysis

Pull Request - State: closed - Opened by tallamjr over 4 years ago

GitHub / tallamjr/astronet issues and pull requests