Ecosyste.ms: Issues

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GitHub / sylvainschmitt/ssdm issues and pull requests

#133 - gbm threshold >1

Issue - State: open - Opened by anaveda 4 months ago

#132 - User bug with dismo::evaluate

Issue - State: open - Opened by kurtvanwyk 6 months ago - 1 comment
Labels: user issue?

#131 - correlation output misses one of the algorithms in the ensemble

Issue - State: open - Opened by AMBarbosa 8 months ago - 3 comments

#130 - Save model results as GeoTIFF

Issue - State: open - Opened by dpoursanidis about 1 year ago - 1 comment
Labels: user issue?

#129 - Save R code in markdown when work with GUI

Issue - State: closed - Opened by dpoursanidis about 1 year ago - 1 comment

#128 - SSDM Package, Threshold Error Using "stack_modelling" function

Issue - State: open - Opened by Eric56-SDM about 1 year ago - 1 comment

#128 - SSDM Package, Threshold Error Using "stack_modelling" function

Issue - State: open - Opened by Eric56-SDM about 1 year ago - 2 comments
Labels: user issue?

#127 - The issue of the evaluate value in SSDM exceeding 1

Issue - State: closed - Opened by zakzom about 1 year ago - 2 comments

#126 - load_occ not working but loads fine in gui()

Issue - State: open - Opened by ikonig over 1 year ago - 2 comments
Labels: user issue?

#125 - pAUC?

Issue - State: closed - Opened by KateOverly-NOAA over 1 year ago - 1 comment
Labels: enhancement

#124 - Variable Importance Output Issue with MARS Algorithm in SSDM package

Issue - State: open - Opened by Montyx23 over 1 year ago - 2 comments
Labels: bug

#124 - Variable Importance Output Issue with MARS Algorithm in SSDM package

Issue - State: closed - Opened by Montyx23 over 1 year ago - 3 comments
Labels: bug

#123 - Please remove dependencies on **rgdal**, **rgeos**, and/or **maptools**

Issue - State: closed - Opened by rsbivand almost 2 years ago - 2 comments
Labels: enhancement

#122 - could not find function ".checkargs"

Issue - State: closed - Opened by Songxingjiang almost 2 years ago

#121 - SSDM installation issue on Mac

Issue - State: closed - Opened by ajhardy13 about 2 years ago - 1 comment

#119 - Response curves?

Issue - State: closed - Opened by Migu95 over 2 years ago - 1 comment
Labels: enhancement, question

#119 - Response curves?

Issue - State: open - Opened by Migu95 over 2 years ago - 1 comment
Labels: enhancement, question

#118 - Model axes contribution evaluation: Error in if (stat != "") { : argument is of length zero

Issue - State: open - Opened by henriqueantoniolli over 2 years ago - 1 comment
Labels: user issue?

#117 - Ensemble.SDM algorithms correlation has not been computed.

Issue - State: closed - Opened by Callahan475 almost 3 years ago - 1 comment

#116 - Fixed issue 108: load_model failed

Pull Request - State: closed - Opened by pritchardtom almost 3 years ago - 1 comment

#114 - All the exported data is training data, Can you also export test data?

Issue - State: closed - Opened by Otoliths almost 3 years ago - 3 comments
Labels: enhancement

#113 - Evaluation metrics for future projection

Issue - State: closed - Opened by AJ-KBA about 3 years ago - 2 comments
Labels: question

#112 - Projection into future

Issue - State: closed - Opened by AJ-KBA about 3 years ago - 6 comments

#112 - Projection into future

Issue - State: closed - Opened by AJ-KBA about 3 years ago - 6 comments

#110 - issues with ensemble.thresh

Issue - State: closed - Opened by hammao over 3 years ago - 1 comment

#109 - Trouble loading raster's remain in new version

Issue - State: closed - Opened by Caelin1234 over 3 years ago - 2 comments

#108 - load_model failed

Issue - State: closed - Opened by pobsteta over 3 years ago - 2 comments
Labels: bug

#106 - HPC and stack_modelling

Issue - State: closed - Opened by JuniperPNG almost 4 years ago - 2 comments

#105 - RF default parameters

Issue - State: closed - Opened by BettyBoyse almost 4 years ago - 3 comments
Labels: enhancement

#104 - arguments imply differing number of rows

Issue - State: closed - Opened by chenqh0618 almost 4 years ago - 2 comments

#103 - Issue applying GAM's models to binomial covariate

Issue - State: closed - Opened by tatopm91 almost 4 years ago - 2 comments

#102 - Stacked species distribution models (SSDMs)

Issue - State: closed - Opened by Alemoraca almost 4 years ago - 1 comment

#101 - error while loading stack models with load_stack: AlgoEval.csv is empty

Issue - State: closed - Opened by aniruddhamarathe about 4 years ago - 2 comments
Labels: user issue?

#100 - [SSDM] error in cluster: Input occurrence problem ?

Issue - State: closed - Opened by pvpoli about 4 years ago - 1 comment

#99 - Model complexity

Issue - State: closed - Opened by adelaide-ui about 4 years ago - 4 comments
Labels: question

#99 - Model complexity

Issue - State: closed - Opened by adelaide-ui about 4 years ago - 4 comments
Labels: question

#98 - Normalization issue in model projection

Issue - State: closed - Opened by CarvalhoResearch about 4 years ago - 7 comments

#97 - How improve species distribution models?

Issue - State: closed - Opened by CarvalhoResearch about 4 years ago - 2 comments
Labels: question

#97 - How improve species distribution models?

Issue - State: closed - Opened by CarvalhoResearch about 4 years ago - 2 comments
Labels: question

#96 - Run models with original functions and use SSDM for ensembling/stacking

Issue - State: closed - Opened by BettyBoyse about 4 years ago - 2 comments

#95 - SSDM and pseudo-absence selection

Issue - State: closed - Opened by lusignorelli about 4 years ago - 2 comments

#94 - Get P-values from variable.importance

Issue - State: closed - Opened by biswasdibyendu over 4 years ago - 2 comments

#93 - Endemism map: how does the map of endemism works?

Issue - State: closed - Opened by preuss96 over 4 years ago - 1 comment

#93 - Endemism map: how does the map of endemism works?

Issue - State: closed - Opened by preuss96 over 4 years ago - 1 comment

#92 - Error in parallel processing

Issue - State: closed - Opened by momeni133 over 4 years ago - 1 comment

#91 - negative variable importance

Issue - State: closed - Opened by mathildehure over 4 years ago - 7 comments

#90 - Maxent problem in stacked.SDM

Issue - State: closed - Opened by preuss96 over 4 years ago - 10 comments

#90 - Maxent problem in stacked.SDM

Issue - State: closed - Opened by preuss96 over 4 years ago - 10 comments

#89 - Warning: In mean.default(corr, na.rm = TRUE) : argument is not numeric or logical: returning NA

Issue - State: closed - Opened by BettyBoyse over 4 years ago - 2 comments
Labels: enhancement

#86 - issue to define categorical variable

Issue - State: closed - Opened by BettyBoyse over 4 years ago - 15 comments
Labels: user issue?

#86 - issue to define categorical variable

Issue - State: open - Opened by BettyBoyse over 4 years ago - 15 comments

#85 - stack_modelling function fails when run in miniconda environment on HPC(centos)

Issue - State: closed - Opened by msjimc over 4 years ago - 10 comments

#84 - Binary threshold and reclassification of projection raster

Issue - State: closed - Opened by lukasbaumbach over 4 years ago - 4 comments
Labels: bug

#83 - How to get the ROC plot ?

Issue - State: closed - Opened by biswasdibyendu over 4 years ago - 1 comment

#81 - Saving the SDM plot as raster layer

Issue - State: closed - Opened by biswasdibyendu over 4 years ago - 2 comments

#79 - Forecast #42

Pull Request - State: closed - Opened by sylvainschmitt over 4 years ago - 8 comments

#78 - Evaluation approach (methods, thresholds, packages)

Issue - State: closed - Opened by lukasbaumbach over 4 years ago - 5 comments
Labels: enhancement

#77 - Model training default

Issue - State: closed - Opened by lukasbaumbach over 4 years ago - 5 comments
Labels: question

#77 - Model training default

Issue - State: closed - Opened by lukasbaumbach over 4 years ago - 5 comments
Labels: question

#76 - Variables normalizatyion and model forecasting

Issue - State: closed - Opened by iuliangherghel over 4 years ago - 13 comments
Labels: question

#75 - Forecasting #42

Pull Request - State: closed - Opened by sylvainschmitt over 4 years ago

#74 - CRAN packages requiring SDMTools

Issue - State: closed - Opened by sylvainschmitt over 4 years ago - 16 comments

#74 - CRAN packages requiring SDMTools

Issue - State: closed - Opened by sylvainschmitt over 4 years ago - 16 comments

#73 - maximum of 30 species?

Issue - State: closed - Opened by xiaofei-liui over 4 years ago - 2 comments

#73 - maximum of 30 species?

Issue - State: closed - Opened by xiaofei-liui over 4 years ago - 2 comments

#72 - Problem loading my own raster input

Issue - State: closed - Opened by MHeynen97 almost 5 years ago - 3 comments

#72 - Problem loading my own raster input

Issue - State: closed - Opened by MHeynen97 almost 5 years ago - 3 comments

#71 - Stack ensembles with different variables

Issue - State: closed - Opened by asierrl almost 5 years ago - 2 comments

#71 - Stack ensembles with different variables

Issue - State: closed - Opened by asierrl almost 5 years ago - 2 comments

#70 - Maxent projection to different area

Issue - State: closed - Opened by lukasbaumbach almost 5 years ago - 3 comments
Labels: enhancement

#69 - how to save the result after using "stacking"

Issue - State: closed - Opened by lwind18 almost 5 years ago - 1 comment

#69 - how to save the result after using "stacking"

Issue - State: closed - Opened by lwind18 almost 5 years ago - 1 comment

#68 - using SSDM

Issue - State: closed - Opened by lwind18 almost 5 years ago - 4 comments
Labels: question

#68 - using SSDM

Issue - State: closed - Opened by lwind18 almost 5 years ago - 4 comments
Labels: question

#67 - problems with PA

Issue - State: closed - Opened by mathildehure almost 5 years ago - 12 comments
Labels: question

#67 - problems with PA

Issue - State: closed - Opened by mathildehure almost 5 years ago - 12 comments
Labels: question

#66 - More arguments for modelling algorithms

Issue - State: closed - Opened by lukasbaumbach almost 5 years ago - 6 comments
Labels: enhancement

#65 - Manual pseudo-absences ?

Issue - State: closed - Opened by FedericoRiva almost 5 years ago - 5 comments
Labels: enhancement

#65 - Manual pseudo-absences ?

Issue - State: closed - Opened by FedericoRiva almost 5 years ago - 5 comments
Labels: enhancement

#64 - Stack_modelling species subset bug

Issue - State: closed - Opened by lukasbaumbach about 5 years ago - 1 comment

#63 - Fix and extend GUI

Pull Request - State: closed - Opened by lukasbaumbach about 5 years ago - 2 comments

#62 - Fixed internal graphic position

Pull Request - State: closed - Opened by kant about 5 years ago - 1 comment

#61 - Calabrese bias correction and more

Pull Request - State: closed - Opened by lukasbaumbach about 5 years ago - 1 comment

#61 - Calabrese bias correction and more

Pull Request - State: closed - Opened by lukasbaumbach about 5 years ago - 1 comment

#60 - Error in [[: subscript out of bounds

Issue - State: closed - Opened by priyamvadazsi about 5 years ago

#58 - Implement parLapply for 'project'

Pull Request - State: closed - Opened by lukasbaumbach over 5 years ago - 1 comment

#57 - Error in stack_modelling(c("CTA", "SVM"),

Issue - State: closed - Opened by priyamvadazsi over 5 years ago - 7 comments