sybila/parasim issues and pull requests

#81 - refactor neighborhood relation to be placed in trajectory not in configuration

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#80 - enable local reaction parameters in SBML file

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#80 - enable local reaction parameters in SBML file

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#79 - update experiment file format documentation

Issue - State: closed - Opened by papousek over 12 years ago
Labels: documentation

#79 - update experiment file format documentation

Issue - State: closed - Opened by papousek over 12 years ago
Labels: documentation

#78 - create experiment manager application

Issue - State: closed - Opened by papousek over 12 years ago - 1 comment
Labels: feature, gui

#78 - create experiment manager application

Issue - State: closed - Opened by papousek over 12 years ago - 1 comment
Labels: feature, gui

#77 - initial sampling doesn't create valid neighborhood for dimension higher than 2

Issue - State: closed - Opened by papousek over 12 years ago
Labels: bug

#77 - initial sampling doesn't create valid neighborhood for dimension higher than 2

Issue - State: closed - Opened by papousek over 12 years ago
Labels: bug

#76 - refactor validity regions computation to use computation emitter

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#76 - refactor validity regions computation to use computation emitter

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#75 - finish support of computation context

Issue - State: open - Opened by papousek over 12 years ago
Labels: enhancement

#75 - finish support of computation context

Issue - State: open - Opened by papousek over 12 years ago
Labels: enhancement

#74 - the parasim-cli application doesn't terminate when the main window is closed

Issue - State: closed - Opened by papousek over 12 years ago - 1 comment
Labels: bug

#74 - the parasim-cli application doesn't terminate when the main window is closed

Issue - State: closed - Opened by papousek over 12 years ago - 1 comment
Labels: bug

#73 - create computation emitter

Issue - State: closed - Opened by papousek over 12 years ago
Labels: feature

#73 - create computation emitter

Issue - State: closed - Opened by papousek over 12 years ago
Labels: feature

#72 - Verify Lotka-Volterra model behaviour

Issue - State: closed - Opened by tomvej over 12 years ago - 1 comment
Labels: experiment

#72 - Verify Lotka-Volterra model behaviour

Issue - State: closed - Opened by tomvej over 12 years ago - 1 comment
Labels: experiment

#71 - Add support for parameter estimation

Issue - State: open - Opened by tomvej over 12 years ago - 1 comment
Labels: enhancement

#71 - Add support for parameter estimation

Issue - State: open - Opened by tomvej over 12 years ago - 1 comment
Labels: enhancement

#70 - STL: Interval lower bound zero -> "must be greater or equal to zero" error

Issue - State: closed - Opened by tomvej over 12 years ago - 1 comment
Labels: bug

#70 - STL: Interval lower bound zero -> "must be greater or equal to zero" error

Issue - State: closed - Opened by tomvej over 12 years ago - 1 comment
Labels: bug

#69 - JSBML has problem with complex cinetic laws

Issue - State: closed - Opened by tomvej over 12 years ago
Labels: bug

#69 - JSBML has problem with complex cinetic laws

Issue - State: closed - Opened by tomvej over 12 years ago
Labels: bug

#68 - add shutdown hook for core manager

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#68 - add shutdown hook for core manager

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#67 - support enums in ExtenionDescriptorMapper

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#67 - support enums in ExtenionDescriptorMapper

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#66 - create extension for remote control

Issue - State: closed - Opened by papousek over 12 years ago
Labels: feature

#66 - create extension for remote control

Issue - State: closed - Opened by papousek over 12 years ago
Labels: feature

#65 - Documentation for Lifecycle Extension

Issue - State: open - Opened by papousek over 12 years ago
Labels: documentation

#65 - Documentation for Lifecycle Extension

Issue - State: open - Opened by papousek over 12 years ago
Labels: documentation

#64 - Documentation for Performence Extension

Issue - State: open - Opened by papousek over 12 years ago
Labels: documentation

#64 - Documentation for Performence Extension

Issue - State: open - Opened by papousek over 12 years ago
Labels: documentation

#63 - introduce a new type of robustness with more dimensions

Issue - State: open - Opened by papousek over 12 years ago
Labels: enhancement

#63 - introduce a new type of robustness with more dimensions

Issue - State: open - Opened by papousek over 12 years ago
Labels: enhancement

#60 - Optimize analysis of kinetic constants

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#60 - Optimize analysis of kinetic constants

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#57 - compute distance only for dimensions (variables) related to the given formula

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#57 - compute distance only for dimensions (variables) related to the given formula

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#56 - Replace ServiceFactory with more sophisticated extension

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#56 - Replace ServiceFactory with more sophisticated extension

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement

#53 - add "onClose" event to plotter extension

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement, gui

#53 - add "onClose" event to plotter extension

Issue - State: closed - Opened by papousek over 12 years ago
Labels: enhancement, gui

#52 - mark original points in visualisation extension

Issue - State: closed - Opened by papousek over 12 years ago
Labels: feature, won't fix, gui

#52 - mark original points in visualisation extension

Issue - State: closed - Opened by papousek over 12 years ago
Labels: feature, won't fix, gui

#51 - visualise trajectories

Issue - State: closed - Opened by papousek over 12 years ago
Labels: feature, gui

#51 - visualise trajectories

Issue - State: closed - Opened by papousek over 12 years ago
Labels: feature, gui

#49 - fix range on axis in flat dimensions

Issue - State: closed - Opened by papousek over 12 years ago - 2 comments
Labels: bug

#49 - fix range on axis in flat dimensions

Issue - State: closed - Opened by papousek over 12 years ago - 2 comments
Labels: bug

#47 - Implement tests for ExperimentLauncher

Issue - State: closed - Opened by papousek over 12 years ago - 1 comment
Labels: tests

#47 - Implement tests for ExperimentLauncher

Issue - State: closed - Opened by papousek over 12 years ago - 1 comment
Labels: tests

#43 - mark original points in visualisation extension

Issue - State: closed - Opened by papousek over 12 years ago
Labels: duplicate

#43 - mark original points in visualisation extension

Issue - State: closed - Opened by papousek over 12 years ago
Labels: duplicate

#39 - finish computation-cycledetection extension

Issue - State: closed - Opened by papousek almost 13 years ago
Labels: feature

#39 - finish computation-cycledetection extension

Issue - State: closed - Opened by papousek almost 13 years ago
Labels: feature

#38 - support step in precision configuration for simulation extension

Issue - State: open - Opened by papousek almost 13 years ago
Labels: enhancement

#38 - support step in precision configuration for simulation extension

Issue - State: open - Opened by papousek almost 13 years ago
Labels: enhancement

#34 - create documentation for compuation extensions

Issue - State: closed - Opened by papousek almost 13 years ago - 1 comment
Labels: documentation

#34 - create documentation for compuation extensions

Issue - State: closed - Opened by papousek almost 13 years ago - 1 comment
Labels: documentation

#32 - fix RKF45 simulator

Issue - State: closed - Opened by papousek almost 13 years ago
Labels: bug, won't fix

#32 - fix RKF45 simulator

Issue - State: closed - Opened by papousek almost 13 years ago
Labels: bug, won't fix

#31 - support generics in manager/context/storage

Issue - State: open - Opened by papousek almost 13 years ago
Labels: enhancement

#31 - support generics in manager/context/storage

Issue - State: open - Opened by papousek almost 13 years ago
Labels: enhancement

#27 - create implementation for DistributedMemoryExecutor

Issue - State: closed - Opened by papousek almost 13 years ago
Labels: feature

#25 - Use concurrency in core manager

Issue - State: open - Opened by papousek almost 13 years ago
Labels: enhancement

#25 - Use concurrency in core manager

Issue - State: open - Opened by papousek almost 13 years ago
Labels: enhancement

#19 - Extensible execution of computations concurrently

Issue - State: closed - Opened by papousek almost 13 years ago

#19 - Extensible execution of computations concurrently

Issue - State: closed - Opened by papousek almost 13 years ago

#18 - Consider using double instead of float

Issue - State: open - Opened by papousek about 13 years ago
Labels: enhancement

#18 - Consider using double instead of float

Issue - State: open - Opened by papousek about 13 years ago
Labels: enhancement

#17 - Point projections

Issue - State: open - Opened by xdrazan about 13 years ago
Labels: feature

#17 - Point projections

Issue - State: open - Opened by xdrazan about 13 years ago
Labels: feature

#16 - Profile the computation

Issue - State: closed - Opened by papousek about 13 years ago
Labels: experiment

#15 - execute some experiments using command line tool

Issue - State: closed - Opened by papousek about 13 years ago - 6 comments
Labels: experiment

#15 - execute some experiments using command line tool

Issue - State: closed - Opened by papousek about 13 years ago - 6 comments
Labels: experiment

#14 - Create application with GUI

Issue - State: closed - Opened by papousek about 13 years ago - 1 comment
Labels: feature, gui, duplicate

#14 - Create application with GUI

Issue - State: closed - Opened by papousek about 13 years ago - 1 comment
Labels: feature, gui, duplicate

GitHub / sybila/parasim issues and pull requests