sunlabuiuc/PyHealth issues and pull requests

#196 - Check TUAB and TUEV

Pull Request - State: closed - Opened by YanjingLiLi over 1 year ago

#195 - Add gitpage to readme and index

Pull Request - State: closed - Opened by ycq091044 over 1 year ago

#194 - Add TUAB, TUEV dataset, task, and example (#179)

Pull Request - State: closed - Opened by ycq091044 over 1 year ago

#193 - Add MedCLIP Model for Zero-shot Inference

Pull Request - State: open - Opened by wuzijian1997 over 1 year ago - 1 comment

#192 - add hands on jupyters for KDD2023

Pull Request - State: closed - Opened by ycq091044 over 1 year ago

#191 - APACHE II calculation

Pull Request - State: open - Opened by vtummala911 over 1 year ago

#190 - Base fairness metrics and example

Pull Request - State: closed - Opened by mhermon over 1 year ago

#189 - recover the original readme file

Pull Request - State: closed - Opened by zzachw over 1 year ago

#188 - Add contributor list (tmp3)

Issue - State: closed - Opened by zzachw over 1 year ago

#187 - docs: add BPDanek as a contributor for code

Pull Request - State: closed - Opened by allcontributors[bot] over 1 year ago

#186 - docs: add v1xerunt as a contributor for code

Pull Request - State: closed - Opened by allcontributors[bot] over 1 year ago

#185 - docs: add zlin7 as a contributor for code

Pull Request - State: closed - Opened by allcontributors[bot] over 1 year ago

#184 - docs: add pat-jj as a contributor for code

Pull Request - State: closed - Opened by allcontributors[bot] over 1 year ago

#183 - docs: add ycq091044 as a contributor for code

Pull Request - State: closed - Opened by allcontributors[bot] over 1 year ago

#182 - docs: add zzachw as a contributor for doc

Pull Request - State: closed - Opened by allcontributors[bot] over 1 year ago

#181 - Add contributor list (tmp2)

Issue - State: closed - Opened by zzachw over 1 year ago - 6 comments

#180 - Add contributor list (tmp1)

Pull Request - State: closed - Opened by zzachw over 1 year ago

#179 - Add TUAB, TUEV dataset, task, and example

Pull Request - State: closed - Opened by YanjingLiLi over 1 year ago - 1 comment

#178 - minor docstring name fixing

Pull Request - State: closed - Opened by ycq091044 over 1 year ago

#177 - add cardiology dataset, task, example (#176)

Pull Request - State: closed - Opened by ycq091044 over 1 year ago - 1 comment

#176 - add cardiology dataset, task, example

Pull Request - State: closed - Opened by YanjingLiLi over 1 year ago

#175 - Add models for image classification task

Pull Request - State: closed - Opened by wuzijian1997 over 1 year ago

#174 - Hello, the question about repositorie "Pandarallel"

Issue - State: closed - Opened by jiangxinke over 1 year ago - 3 comments

#173 - Pretrained Embedding Support

Pull Request - State: closed - Opened by pat-jj over 1 year ago - 1 comment

#172 - Core structure updates: image and text featurizer

Pull Request - State: open - Opened by zzachw over 1 year ago
Labels: core structure

#171 - Update install.rst for testing

Pull Request - State: closed - Opened by solarsys over 1 year ago - 1 comment

#169 - fix bugs, add new metrics and tasks

Pull Request - State: open - Opened by v1xerunt over 1 year ago

#168 - Improve eICU parser for Synthetic Data Generation

Pull Request - State: closed - Opened by BPDanek over 1 year ago

#167 - separate forward into forward & fit

Pull Request - State: open - Opened by ycq091044 over 1 year ago - 3 comments

#166 - Bdanek/omop typo

Pull Request - State: closed - Opened by BPDanek over 1 year ago

#165 - HALO Synthetic Data Generation

Pull Request - State: closed - Opened by BPDanek over 1 year ago - 1 comment

#164 - (bad rebase) Synthetic Data Generation

Pull Request - State: closed - Opened by BPDanek over 1 year ago

#163 - V1.1.4 release

Pull Request - State: closed - Opened by ycq091044 over 1 year ago

#162 - improve shhs dataset loader and add its sleep stage task

Pull Request - State: closed - Opened by ycq091044 over 1 year ago

#161 - OMOP measurement continuous values

Pull Request - State: closed - Opened by BPDanek over 1 year ago - 1 comment

#160 - Improvements to MIMIC parsing

Pull Request - State: closed - Opened by BPDanek over 1 year ago

#159 - Dirichlet Calibration

Pull Request - State: closed - Opened by zlin7 over 1 year ago - 3 comments

#158 - update the ACM official paper link for MoleRec

Pull Request - State: closed - Opened by yangnianzu0515 over 1 year ago

#157 - fix very low accuracy metric

Pull Request - State: closed - Opened by louis-she almost 2 years ago - 1 comment

#155 - minor fix on readthedocs text

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#154 - Bump flask from 2.2.2 to 2.2.5 in /docs

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago
Labels: dependencies

#153 - add docs for molerec and mimicextract dataset

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#152 - solve readthedoc build issue (due to upgrade of urllib3)

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#151 - mimic-extract, new maintainers, kdd23 turorial

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#150 - Entering deadlock when parsing prescriptions

Issue - State: closed - Opened by louis-she almost 2 years ago - 9 comments

#149 - Merged eICUDataset diagnosis and diagnosisString parser (Resolve #148)

Pull Request - State: closed - Opened by lycpaul almost 2 years ago

#148 - Addition for eicu

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago - 1 comment

#147 - Added new parser functions and prediction tasks for eICU dataset

Pull Request - State: closed - Opened by lycpaul almost 2 years ago - 1 comment

#146 - bug fix for dependency

Pull Request - State: closed - Opened by zengkaipeng almost 2 years ago

#145 - update index and readme

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#144 - Feature/xray report generation

Pull Request - State: open - Opened by samarthkeshari almost 2 years ago - 1 comment

#143 - remove torch_scatter

Pull Request - State: closed - Opened by zengkaipeng almost 2 years ago

#142 - update logs for the past two months

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#141 - Fix GRASP model's bugs (type hints, parameter error, infinite loop er…

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago - 1 comment

#140 - fix mask create bug

Pull Request - State: closed - Opened by louis-she almost 2 years ago - 5 comments

#139 - Fix GRASP model's bugs (type hints, parameter error, infinite loop errors)

Pull Request - State: closed - Opened by yhzhu99 almost 2 years ago

#138 - Fix GRASP model's bugs (type hints and parameter error)

Pull Request - State: closed - Opened by yhzhu99 almost 2 years ago

#137 - Bdanek/ai4health bowl changes

Pull Request - State: closed - Opened by BPDanek almost 2 years ago

#136 - MIMIC-Extract dataset

Pull Request - State: closed - Opened by SphtKr almost 2 years ago - 6 comments

#135 - pandas 2 breaks parallel_apply

Pull Request - State: closed - Opened by BPDanek almost 2 years ago

#134 - Add hcpcsevents table in MIMIC4 dataset

Pull Request - State: closed - Opened by NitaAgarwal2022 almost 2 years ago

#133 - Update mimic4.py

Pull Request - State: closed - Opened by NitaAgarwal2022 almost 2 years ago

#132 - Ambiguous datetime usage on dateutils.parser.parse causes incorrect t…

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#131 - return logits (and embeddings if requested) for non-drug models (#130)

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#130 - return logits (and embeddings if requested) for non-drug models

Pull Request - State: closed - Opened by zlin7 almost 2 years ago

#129 - KeyError: 'logit'

Issue - State: closed - Opened by bbb801 almost 2 years ago - 3 comments

#128 - pyhealth.calib.calibration.

Issue - State: closed - Opened by bbb801 almost 2 years ago

#127 - HALO <> PyHealth

Pull Request - State: closed - Opened by BPDanek almost 2 years ago

#126 - Uncertainty quantification modules (#111)

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#125 - Ambiguous datetime usage on dateutils.parser.parse causes incorrect timestamps in eICU

Pull Request - State: closed - Opened by BPDanek almost 2 years ago - 1 comment

#124 - github-actions testing

Pull Request - State: closed - Opened by BPDanek almost 2 years ago

#123 - fix typos in README.rst

Pull Request - State: closed - Opened by chadyuu almost 2 years ago

#122 - Add new model MoleRec (#121)

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#121 - Add new model MoleRec

Pull Request - State: closed - Opened by zengkaipeng almost 2 years ago - 1 comment

#120 - update models in index.html

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#119 - Covid benchmark

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#118 - support 6 new EHR models from covid benchmark (#108)

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago - 1 comment

#117 - fix bugs in adacare, concare and agent models

Pull Request - State: closed - Opened by v1xerunt almost 2 years ago

#116 - add examples

Pull Request - State: closed - Opened by v1xerunt almost 2 years ago

#115 - omop, eicu unittest; github pr check (manual); numpy dependency

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#114 - Add OMOP dataset + workflow

Pull Request - State: closed - Opened by BPDanek almost 2 years ago - 1 comment

#113 - Knowledge Graph Support

Pull Request - State: closed - Opened by pat-jj almost 2 years ago - 3 comments

#112 - Bdanek/test artifact

Pull Request - State: closed - Opened by BPDanek almost 2 years ago

#111 - Uncertainty quantification modules

Pull Request - State: closed - Opened by zlin7 almost 2 years ago - 4 comments

#110 - add numpy to requirement

Pull Request - State: closed - Opened by zlin7 almost 2 years ago

#109 - feat: Github actions integration for test

Pull Request - State: closed - Opened by BPDanek almost 2 years ago

#108 - support 6 new EHR models from covid benchmark

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago - 2 comments

#107 - Support new 6 EHR models

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago

#106 - Support new 6 EHR models

Pull Request - State: closed - Opened by v1xerunt almost 2 years ago

#105 - add ISRUC dataset (#103)

Pull Request - State: closed - Opened by ycq091044 almost 2 years ago - 1 comment

#104 - Bdanek/OMOP + eICU test + stat test + Event class default values + Github actions

Pull Request - State: closed - Opened by BPDanek almost 2 years ago - 4 comments

#103 - ISRUC dataset

Pull Request - State: closed - Opened by zlin7 almost 2 years ago

#102 - Support image dataset

Pull Request - State: closed - Opened by zzachw about 2 years ago - 2 comments
Labels: core structure

#101 - Add SPaRCNet; add SHHS dataset

Pull Request - State: closed - Opened by ycq091044 about 2 years ago

#100 - add SparcNet model for signal learning; add half SHHS dataset

Pull Request - State: closed - Opened by ycq091044 about 2 years ago

#99 - MIMIC3 and MIMIC4 demo unit tests + check basic tables (#98)

Pull Request - State: closed - Opened by BPDanek about 2 years ago

#98 - MIMIC3 and MIMIC4 demo unit tests + check basic tables

Pull Request - State: closed - Opened by BPDanek about 2 years ago - 3 comments

#97 - MIMIC3 and MIMIC4 demo unit tests + check basic tables

Pull Request - State: closed - Opened by BPDanek about 2 years ago

#96 - support biosignal data, add ContraWR, add pyhealth live 08

Pull Request - State: closed - Opened by ycq091044 about 2 years ago

#95 - update pyhealth live 08 info

Pull Request - State: closed - Opened by ycq091044 about 2 years ago

GitHub / sunlabuiuc/PyHealth issues and pull requests