Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / stschiff/msmc issues and pull requests
#56 - using the phased-vcf files as input for MSMC2
Issue -
State: closed - Opened by Niloofar-Alaei about 1 year ago
- 1 comment
#54 - AssertionError while using generate_multihetsep.py
Issue -
State: closed - Opened by Luker121 almost 2 years ago
- 1 comment
#53 - Unexpected 'g' when converting from type char[] to type ulong
Issue -
State: closed - Opened by hyperoplus about 2 years ago
- 7 comments
#51 - Error in installing software
Issue -
State: closed - Opened by suying77 over 2 years ago
#50 - MSMC2- install error
Issue -
State: closed - Opened by lwlive about 3 years ago
- 2 comments
#48 - "The sequence "chr1" was not found"
Issue -
State: closed - Opened by selasphoruskershaw over 3 years ago
- 1 comment
#47 - precompiled binaries not working on macOS Catalina
Issue -
State: closed - Opened by jssdenton about 4 years ago
- 1 comment
#46 - powell exceeding maximum iterations
Issue -
State: closed - Opened by dieunelderilus about 5 years ago
- 6 comments
#45 - How to install MSMC
Issue -
State: closed - Opened by WANGyujian123 about 5 years ago
- 1 comment
#44 - trying to replicate Fig2 of Schiffels & Durbin (2014)
Issue -
State: closed - Opened by andrewkern about 5 years ago
- 6 comments
#43 - Abnormal results of MSMC, and need help ~
Issue -
State: closed - Opened by Yun-HongWu about 5 years ago
- 2 comments
#42 - Effect of introgression and selfing for estimation of population split
Issue -
State: closed - Opened by oushujun almost 6 years ago
- 1 comment
#41 - decode time units
Issue -
State: closed - Opened by arundurvasula almost 6 years ago
- 3 comments
#40 - MSMC error
Issue -
State: closed - Opened by kentsing almost 6 years ago
- 12 comments
#39 - MSMC running with the divergent individuals
Issue -
State: closed - Opened by yongzhiyang2012 almost 6 years ago
- 1 comment
#38 - install error
Issue -
State: closed - Opened by Sh1ne111 almost 6 years ago
- 1 comment
#37 - running msmc without final result
Issue -
State: closed - Opened by rxw125 almost 6 years ago
- 1 comment
#36 - error running msmc
Issue -
State: closed - Opened by JPingAMMS about 6 years ago
- 2 comments
#35 - another Segmentation Fault
Issue -
State: closed - Opened by mike2vandy about 6 years ago
- 1 comment
#34 - AssertError bootstrap
Issue -
State: closed - Opened by bioinformaticspcj about 6 years ago
- 2 comments
#33 - Segfault on your test file in the guide
Issue -
State: closed - Opened by fishextinction over 6 years ago
- 4 comments
#32 - msmc error
Issue -
State: closed - Opened by yuntwang over 6 years ago
- 2 comments
#31 - Segmentation Falt on OSX (Mac)
Issue -
State: closed - Opened by swamidass over 6 years ago
- 3 comments
#30 - How to interpret the abormal results using two haplotypes from each population when running MSMC?
Issue -
State: closed - Opened by biozzq almost 7 years ago
- 1 comment
#29 - different results between MSMC and MSMC2
Issue -
State: closed - Opened by JiangYuLab almost 7 years ago
- 2 comments
#28 - Segmentation fault for running barley sample
Issue -
State: closed - Opened by lilei1 about 7 years ago
- 6 comments
#27 - Can I use only sequence data in fasta format to run MSMC?
Issue -
State: closed - Opened by YangChaoCN over 7 years ago
- 1 comment
#26 - remove repeatmask region
Issue -
State: closed - Opened by wlz0726 over 7 years ago
- 2 comments
#25 - Deal unphased vcf
Issue -
State: closed - Opened by SC-Duan over 7 years ago
- 4 comments
#24 - Can MSMC deal unphased haplotypes?
Issue -
State: closed - Opened by SC-Duan over 7 years ago
#23 - resequencing data of non-model diploid organism
Issue -
State: closed - Opened by xier92 over 7 years ago
- 2 comments
#22 - Couple issues understanding decode output
Issue -
State: closed - Opened by jthuff almost 8 years ago
- 5 comments
#21 - Synthetic Haplotypes
Issue -
State: closed - Opened by LiverpoolHarry about 8 years ago
- 1 comment
#20 - question on analysis with whole genome data
Issue -
State: closed - Opened by zhyanlin about 8 years ago
#19 - Questions of using MSMC decode on multiple haplotypes
Issue -
State: closed - Opened by muhuaw about 8 years ago
- 4 comments
#18 - should I keep unphased sites?
Issue -
State: closed - Opened by hhu1 over 8 years ago
- 1 comment
Labels: question
#17 - Gene flow estimation with 2 haplotypes?
Issue -
State: closed - Opened by arundurvasula over 8 years ago
- 4 comments
#16 - Segmentation fault
Issue -
State: closed - Opened by sailgu almost 9 years ago
- 5 comments
#15 - Segmentation fault with large number of scaffolds
Issue -
State: closed - Opened by frl1 almost 9 years ago
- 4 comments
#14 - Problems compiling on RHEL 6.4
Issue -
State: closed - Opened by rvmoye almost 9 years ago
- 1 comment
#13 - Doesn't multithread
Issue -
State: closed - Opened by alanrogers about 9 years ago
- 1 comment
Labels: question
#12 - Won't compile on 32-bit linux.
Issue -
State: closed - Opened by alanrogers about 9 years ago
- 3 comments
Labels: bug
#11 - memory consumption of MSMC
Issue -
State: closed - Opened by hhu1 about 9 years ago
- 2 comments
Labels: question
#10 - mappability mask file
Issue -
State: closed - Opened by BegonaMartinez about 9 years ago
- 1 comment
Labels: question
#9 - MSMC with genomes in multiple scaffolds, not in chromosomes
Issue -
State: closed - Opened by BegonaMartinez about 9 years ago
- 4 comments
Labels: feature request
#8 - New Error installing from source
Issue -
State: closed - Opened by potw about 9 years ago
- 5 comments
Labels: bug
#7 - msmc is too restrictive WRT chromosome IDs
Issue -
State: closed - Opened by mhinsch over 9 years ago
- 1 comment
#6 - msmc can't handle empty .conf files
Issue -
State: closed - Opened by mhinsch over 9 years ago
- 1 comment
Labels: feature request
#5 - error in tools/generate_multihetsep.py
Issue -
State: closed - Opened by cxue over 9 years ago
- 1 comment
#4 - Baumwelch iteration Maximization Step cannot complete after 200 rounds causing msmc exits with error
Issue -
State: closed - Opened by zhoujinjean over 9 years ago
- 1 comment
#3 - errors with installing from source
Issue -
State: closed - Opened by singhal almost 10 years ago
- 3 comments
#2 - CG_caller update
Pull Request -
State: closed - Opened by songsy almost 10 years ago
#1 - Update cgCaller.py
Pull Request -
State: closed - Opened by songsy almost 10 years ago
- 2 comments