stjude/proteinpaint issues and pull requests

#1985 - top mutated genes request returns genes with 0 rendered hits (only has CNV)

Issue - State: closed - Opened by siosonel about 2 months ago - 4 comments

#1985 - top mutated genes request returns genes with 0 rendered hits (only has CNV)

Issue - State: closed - Opened by siosonel about 2 months ago - 4 comments

#1984 - Facet updates

Pull Request - State: closed - Opened by creilly8 about 2 months ago - 1 comment

#1984 - Facet updates

Pull Request - State: closed - Opened by creilly8 about 2 months ago - 1 comment

#1984 - Facet updates

Pull Request - State: closed - Opened by creilly8 about 2 months ago - 1 comment

#1983 - matrix genes menu: at editing a group, move the group selector from s…

Pull Request - State: closed - Opened by congyu-lu about 2 months ago - 4 comments

#1982 - Gene search integration tests and updated unit tests

Pull Request - State: closed - Opened by creilly8 about 2 months ago

#1982 - Gene search integration tests and updated unit tests

Pull Request - State: closed - Opened by creilly8 about 2 months ago

#1982 - Gene search integration tests and updated unit tests

Pull Request - State: closed - Opened by creilly8 about 2 months ago

#1981 - Implement sample and static rendering for the facet table

Pull Request - State: closed - Opened by creilly8 about 2 months ago - 1 comment

#1980 - gdc hiercluster: skip calling /gene_selection twice when launched from gdc launcher

Issue - State: open - Opened by xzhou82 about 2 months ago

#1980 - gdc hiercluster: skip calling /gene_selection twice when launched from gdc launcher

Issue - State: open - Opened by xzhou82 about 2 months ago

#1980 - gdc hiercluster: skip calling /gene_selection twice when launched from gdc launcher

Issue - State: open - Opened by xzhou82 about 2 months ago

#1979 - support max 1000 genes for GDC GEC tool

Pull Request - State: closed - Opened by siosonel about 2 months ago

#1978 - stricter type check for bundled datasets, using the satisfies keyword

Pull Request - State: closed - Opened by siosonel about 2 months ago

#1977 - Change host for SJLife scatterplot examples

Pull Request - State: closed - Opened by creilly8 about 2 months ago

#1977 - Change host for SJLife scatterplot examples

Pull Request - State: closed - Opened by creilly8 about 2 months ago

#1976 - fix bug in termdb.sql.js line 55 and clarify purpose of ${type}_samples table

Issue - State: open - Opened by xzhou82 about 2 months ago

#1976 - fix bug in termdb.sql.js line 55 and clarify purpose of ${type}_samples table

Issue - State: open - Opened by xzhou82 about 2 months ago

#1976 - fix bug in termdb.sql.js line 55 and clarify purpose of ${type}_samples table

Issue - State: open - Opened by xzhou82 about 2 months ago

#1975 - facet table is missing uncomputable categories

Issue - State: closed - Opened by xzhou82 about 2 months ago

#1975 - facet table is missing uncomputable categories

Issue - State: closed - Opened by xzhou82 about 2 months ago

#1974 - mass ui should still render on err at getPlotConfig()

Issue - State: open - Opened by xzhou82 about 2 months ago

#1974 - mass ui should still render on err at getPlotConfig()

Issue - State: open - Opened by xzhou82 about 2 months ago

#1974 - mass ui should still render on err at getPlotConfig()

Issue - State: closed - Opened by xzhou82 about 2 months ago

#1973 - Facet title now shows terms selected

Pull Request - State: closed - Opened by airenzp about 2 months ago

#1973 - Facet title now shows terms selected

Pull Request - State: closed - Opened by airenzp about 2 months ago

#1973 - Facet title now shows terms selected

Pull Request - State: closed - Opened by airenzp about 2 months ago

#1972 - Render facet table for all datasets

Pull Request - State: closed - Opened by creilly8 about 2 months ago - 1 comment

#1972 - Render facet table for all datasets

Pull Request - State: closed - Opened by creilly8 about 2 months ago - 1 comment

#1972 - Render facet table for all datasets

Pull Request - State: closed - Opened by creilly8 about 2 months ago - 1 comment

#1971 - changed color for protein altering mutations to magenta

Pull Request - State: closed - Opened by karishma-gangwani about 2 months ago

#1970 - In the scatter, merged changes from Karishma's previous branch here

Pull Request - State: closed - Opened by airenzp 2 months ago

#1970 - In the scatter, merged changes from Karishma's previous branch here

Pull Request - State: closed - Opened by airenzp 2 months ago

#1970 - In the scatter, merged changes from Karishma's previous branch here

Pull Request - State: closed - Opened by airenzp 2 months ago

#1969 - facet table should handle case of ds not allowing to show sample-level info

Issue - State: closed - Opened by xzhou82 2 months ago

#1969 - facet table should handle case of ds not allowing to show sample-level info

Issue - State: closed - Opened by xzhou82 2 months ago

#1969 - facet table should handle case of ds not allowing to show sample-level info

Issue - State: closed - Opened by xzhou82 2 months ago

#1968 - Corrected scatter plot app card update message to match example names

Pull Request - State: closed - Opened by creilly8 2 months ago

#1968 - Corrected scatter plot app card update message to match example names

Pull Request - State: closed - Opened by creilly8 2 months ago

#1968 - Corrected scatter plot app card update message to match example names

Pull Request - State: closed - Opened by creilly8 2 months ago

#1967 - do not abort on checking stale gdc cache

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1967 - do not abort on checking stale gdc cache

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1966 - improvement for shapes for scatter plot

Pull Request - State: closed - Opened by karishma-gangwani 2 months ago

#1965 - Profile replaced isLoggedIn with logged

Pull Request - State: closed - Opened by airenzp 2 months ago

#1965 - Profile replaced isLoggedIn with logged

Pull Request - State: closed - Opened by airenzp 2 months ago

#1965 - Profile replaced isLoggedIn with logged

Pull Request - State: closed - Opened by airenzp 2 months ago

#1964 - Added icon button to open a new plot from the current plot

Pull Request - State: closed - Opened by airenzp 2 months ago

#1964 - Added icon button to open a new plot from the current plot

Pull Request - State: closed - Opened by airenzp 2 months ago

#1964 - Added icon button to open a new plot from the current plot

Pull Request - State: closed - Opened by airenzp 2 months ago

#1963 - Profile fixes

Pull Request - State: closed - Opened by airenzp 2 months ago

#1963 - Profile fixes

Pull Request - State: closed - Opened by airenzp 2 months ago

#1963 - Profile fixes

Pull Request - State: closed - Opened by airenzp 2 months ago

#1962 - fix: prototype to allow GDC dictionary terms to work for barchart and…

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1962 - fix: prototype to allow GDC dictionary terms to work for barchart and…

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1962 - fix: prototype to allow GDC dictionary terms to work for barchart and…

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1961 - support gdc dict terms in barchart

Issue - State: closed - Opened by xzhou82 2 months ago

#1961 - support gdc dict terms in barchart

Issue - State: closed - Opened by xzhou82 2 months ago

#1961 - support gdc dict terms in barchart

Issue - State: closed - Opened by xzhou82 2 months ago

#1960 - Custom track UI update

Pull Request - State: closed - Opened by creilly8 2 months ago

#1960 - Custom track UI update

Pull Request - State: closed - Opened by creilly8 2 months ago

#1960 - Custom track UI update

Pull Request - State: closed - Opened by creilly8 2 months ago

#1959 - Improved scatter legend for gene variant terms

Pull Request - State: closed - Opened by airenzp 2 months ago - 1 comment

#1959 - Improved scatter legend for gene variant terms

Pull Request - State: closed - Opened by airenzp 2 months ago - 1 comment

#1959 - Improved scatter legend for gene variant terms

Pull Request - State: closed - Opened by airenzp 2 months ago - 1 comment

#1958 - update python readme

Pull Request - State: closed - Opened by congyu-lu 2 months ago

#1958 - update python readme

Pull Request - State: closed - Opened by congyu-lu 2 months ago

#1958 - update python readme

Pull Request - State: closed - Opened by congyu-lu 2 months ago

#1957 - fix branImaging div undefined error

Pull Request - State: closed - Opened by congyu-lu 2 months ago

#1957 - fix branImaging div undefined error

Pull Request - State: closed - Opened by congyu-lu 2 months ago

#1957 - fix branImaging div undefined error

Pull Request - State: closed - Opened by congyu-lu 2 months ago

#1956 - Using bootstrap icons for the scatter shapes

Pull Request - State: closed - Opened by airenzp 2 months ago - 6 comments

#1956 - Using bootstrap icons for the scatter shapes

Pull Request - State: closed - Opened by airenzp 2 months ago - 6 comments

#1956 - Using bootstrap icons for the scatter shapes

Pull Request - State: closed - Opened by airenzp 2 months ago - 6 comments

#1955 - Fix for failing App header integration test on CI

Pull Request - State: closed - Opened by creilly8 2 months ago

#1955 - Fix for failing App header integration test on CI

Pull Request - State: closed - Opened by creilly8 2 months ago

#1955 - Fix for failing App header integration test on CI

Pull Request - State: closed - Opened by creilly8 2 months ago

#1954 - App Header integration tests

Pull Request - State: closed - Opened by creilly8 2 months ago

#1954 - App Header integration tests

Pull Request - State: closed - Opened by creilly8 2 months ago

#1954 - App Header integration tests

Pull Request - State: closed - Opened by creilly8 2 months ago

#1953 - add notes on profile design and remove chart name from mass

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1953 - add notes on profile design and remove chart name from mass

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1953 - add notes on profile design and remove chart name from mass

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1952 - hided plot title on comparison and fixed barchart bug

Pull Request - State: closed - Opened by airenzp 2 months ago

#1951 - fix: improve getData() to handle missing bin config for gene exp term…

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1950 - fix: on validating container, gdc logic will skip case caching and st…

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1949 - at gdc gene exp violin, on applying discrete mode, server requests data twice and takes excessive time

Issue - State: closed - Opened by xzhou82 2 months ago

#1948 - in gdc mds3 tk, when selecting term for subtk filtering, hide survival term from tree

Issue - State: closed - Opened by xzhou82 2 months ago

#1947 - refactor groupsetting and type def

Pull Request - State: closed - Opened by creilly8 2 months ago - 4 comments

#1946 - DMI

Pull Request - State: closed - Opened by josephpowi 2 months ago

#1945 - fix: violin data request at gene exp termsetting ui observes filter0

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1944 - termsetting density plot request does not observe filter0

Issue - State: closed - Opened by xzhou82 2 months ago

#1943 - Improved comparison mode and added summary button

Pull Request - State: closed - Opened by airenzp 2 months ago

#1942 - Remove plot-specific and term-specific validation functions from mass/store.js

Pull Request - State: closed - Opened by gavrielm 2 months ago

#1941 - metabolite ts handler to conditionally fill bins

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1940 - Re-enable server-side tsc checks and resolve tsc errors

Pull Request - State: closed - Opened by gavrielm 2 months ago

#1939 - fix: pp and gdc filter are passed to getDefaultBin request for gene e…

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1939 - fix: pp and gdc filter are passed to getDefaultBin request for gene e…

Pull Request - State: closed - Opened by xzhou82 2 months ago

#1938 - flipping from violin to barchart does not set q.type for metabolite

Issue - State: closed - Opened by xzhou82 2 months ago - 4 comments

#1937 - Fix for genome button

Pull Request - State: closed - Opened by creilly8 2 months ago

GitHub / stjude/proteinpaint issues and pull requests