Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / stjude/proteinpaint issues and pull requests

#2047 - Db parent annotations

Pull Request - State: closed - Opened by airenzp about 1 month ago - 10 comments

#2046 - Remove host for testing

Pull Request - State: closed - Opened by creilly8 about 1 month ago

#2044 - Hide app cards base on server config options

Pull Request - State: closed - Opened by creilly8 about 1 month ago

#2043 - at hiercluster, click gene dendro to highlight, show genes, and launch ORA

Pull Request - State: closed - Opened by congyu-lu about 1 month ago - 2 comments

#2042 - Background genes optional in gene overrepresentation analysis

Pull Request - State: closed - Opened by robinpaul85 about 1 month ago

#2041 - Support custom variable in regression

Pull Request - State: closed - Opened by gavrielm about 1 month ago

#2040 - Test for gene search results

Pull Request - State: closed - Opened by creilly8 about 1 month ago - 2 comments

#2039 - fix defective html link of term def in termdbtest

Pull Request - State: closed - Opened by xzhou82 about 1 month ago

#2038 - term definition PMID link doesn't work

Issue - State: closed - Opened by congyu-lu about 1 month ago

#2037 - Add sandbox header and change sample id for wsiviewer

Pull Request - State: closed - Opened by creilly8 about 1 month ago

#2036 - enable gene search integration test

Issue - State: closed - Opened by xzhou82 about 1 month ago

#2035 - fix: matrix divideby breaks when using gene exp

Pull Request - State: closed - Opened by congyu-lu about 1 month ago - 2 comments

#2034 - Wsi plot.2

Pull Request - State: closed - Opened by creilly8 about 1 month ago - 1 comment

#2033 - enable 2k genes for gdc gene exp clustering

Pull Request - State: closed - Opened by xzhou82 about 1 month ago

#2032 - gdc gene exp cluster: allow 2k genes

Issue - State: closed - Opened by xzhou82 about 1 month ago

#2031 - fix file-based session recovery of regression plot

Pull Request - State: closed - Opened by siosonel about 1 month ago

#2030 - Run WSIViewer from `runpp()`

Pull Request - State: closed - Opened by creilly8 about 1 month ago

#2029 - Wsi thumbnails

Pull Request - State: closed - Opened by aacic about 1 month ago

#2028 - Added global filter to facet request

Pull Request - State: closed - Opened by airenzp about 1 month ago

#2027 - fix: At GDC lollipop subtrack, disable survival term when building th…

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#2026 - delete unused gdc feature toggle related to data caching

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#2025 - centralize data type feature toggle in termdb.config.ts, no need to a…

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#2024 - fix: Fix wsi request type issue

Pull Request - State: closed - Opened by aacic about 2 months ago

#2023 - Add filter extreme values options to gene set edit UI

Pull Request - State: closed - Opened by robinpaul85 about 2 months ago

#2022 - fix: when a term has no computable values, do not calculate descripti…

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#2021 - Stand alone image viewer

Issue - State: closed - Opened by creilly8 about 2 months ago - 2 comments

#2020 - sjlife dxcode barchart breaks

Issue - State: closed - Opened by xzhou82 about 2 months ago

#2019 - fix: add missing return in switch statement that breaks dual-term sel…

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#2018 - with custom term, dom/select2Terms.js breaks

Issue - State: closed - Opened by xzhou82 about 2 months ago

#2018 - with custom term, dom/select2Terms.js breaks

Issue - State: closed - Opened by xzhou82 about 2 months ago

#2017 - Fix gsea error

Pull Request - State: closed - Opened by robinpaul85 about 2 months ago

#2016 - fix: Assign alive/dead labels to GDC survival exit codes

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#2016 - fix: Assign alive/dead labels to GDC survival exit codes

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#2016 - fix: Assign alive/dead labels to GDC survival exit codes

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#2015 - Custom variable gene expression summary scatter

Pull Request - State: closed - Opened by congyu-lu about 2 months ago

#2015 - Custom variable gene expression summary scatter

Pull Request - State: closed - Opened by congyu-lu about 2 months ago

#2015 - Custom variable gene expression summary scatter

Pull Request - State: closed - Opened by congyu-lu about 2 months ago

#2015 - Custom variable gene expression summary scatter

Pull Request - State: closed - Opened by congyu-lu about 2 months ago

#2014 - matrix survival row on hover should replace exit code with human readable names

Issue - State: closed - Opened by xzhou82 about 2 months ago - 1 comment

#2014 - matrix survival row on hover should replace exit code with human readable names

Issue - State: closed - Opened by xzhou82 about 2 months ago - 1 comment

#2014 - matrix survival row on hover should replace exit code with human readable names

Issue - State: closed - Opened by xzhou82 about 2 months ago - 1 comment

#2013 - Differential Metabolites analysis

Pull Request - State: closed - Opened by josephpowi about 2 months ago

#2013 - Differential Metabolites analysis

Pull Request - State: open - Opened by josephpowi about 2 months ago

#2012 - make the postcss quick fix more permanent

Pull Request - State: closed - Opened by siosonel about 2 months ago

#2012 - make the postcss quick fix more permanent

Pull Request - State: closed - Opened by siosonel about 2 months ago

#2012 - make the postcss quick fix more permanent

Pull Request - State: closed - Opened by siosonel about 2 months ago

#2012 - make the postcss quick fix more permanent

Pull Request - State: closed - Opened by siosonel about 2 months ago

#2011 - matrix divideby breaks when using gene exp

Issue - State: closed - Opened by xzhou82 about 2 months ago - 1 comment

#2010 - no longer aborts container launch on gdc api test failure

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#2010 - no longer aborts container launch on gdc api test failure

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#2009 - Restore access to public radars without site filter

Pull Request - State: closed - Opened by airenzp about 2 months ago

#2009 - Restore access to public radars without site filter

Pull Request - State: closed - Opened by airenzp about 2 months ago

#2009 - Restore access to public radars without site filter

Pull Request - State: closed - Opened by airenzp about 2 months ago

#2008 - matrix: divideby and gene menu bug fix

Pull Request - State: closed - Opened by congyu-lu about 2 months ago - 1 comment

#2008 - matrix: divideby and gene menu bug fix

Pull Request - State: closed - Opened by congyu-lu about 2 months ago - 1 comment

#2007 - Fix for omnisearch gene menu

Pull Request - State: closed - Opened by creilly8 about 2 months ago

#2006 - Update prompt in integration test to reflect recent code changes.

Pull Request - State: closed - Opened by creilly8 about 2 months ago

#2005 - disco fix

Pull Request - State: closed - Opened by xzhou82 about 2 months ago - 2 comments

#2004 - client breaks from scrna running gsea

Issue - State: closed - Opened by xzhou82 about 2 months ago

#2001 - gdc disco plot missing mutations

Issue - State: closed - Opened by xzhou82 about 2 months ago

#2000 - Added poc note to full barchart

Pull Request - State: closed - Opened by airenzp about 2 months ago

#1999 - centralize data type feature toggle in termdb.config.ts

Issue - State: closed - Opened by xzhou82 about 2 months ago

#1999 - centralize data type feature toggle in termdb.config.ts

Issue - State: open - Opened by xzhou82 about 2 months ago

#1999 - centralize data type feature toggle in termdb.config.ts

Issue - State: open - Opened by xzhou82 about 2 months ago

#1998 - matrix: allow to specify sample groups in plot state instead of automatically decided

Pull Request - State: closed - Opened by congyu-lu about 2 months ago - 1 comment

#1998 - matrix: allow to specify sample groups in plot state instead of automatically decided

Pull Request - State: closed - Opened by congyu-lu about 2 months ago - 1 comment

#1998 - matrix: allow to specify sample groups in plot state instead of automatically decided

Pull Request - State: closed - Opened by congyu-lu about 2 months ago - 1 comment

#1997 - fix: Proper pass case filter to GenesTable gdc query so ssm case coun…

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#1997 - fix: Proper pass case filter to GenesTable gdc query so ssm case coun…

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#1997 - fix: Proper pass case filter to GenesTable gdc query so ssm case coun…

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#1996 - gdc top mutated gene stat does not respond to cohort filter

Issue - State: closed - Opened by xzhou82 about 2 months ago

#1996 - gdc top mutated gene stat does not respond to cohort filter

Issue - State: closed - Opened by xzhou82 about 2 months ago

#1996 - gdc top mutated gene stat does not respond to cohort filter

Issue - State: closed - Opened by xzhou82 about 2 months ago

#1995 - WIP: WSIViewer

Pull Request - State: closed - Opened by aacic about 2 months ago - 1 comment

#1994 - introduce assay availability terms and fix term def bug

Pull Request - State: closed - Opened by xzhou82 about 2 months ago - 1 comment

#1994 - introduce assay availability terms and fix term def bug

Pull Request - State: closed - Opened by xzhou82 about 2 months ago - 1 comment

#1993 - introduce assay availability terms and fix term def bug

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#1993 - introduce assay availability terms and fix term def bug

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#1993 - introduce assay availability terms and fix term def bug

Pull Request - State: closed - Opened by xzhou82 about 2 months ago

#1992 - In the PROFILE, updated plot titles

Pull Request - State: closed - Opened by airenzp about 2 months ago

#1992 - In the PROFILE, updated plot titles

Pull Request - State: closed - Opened by airenzp about 2 months ago

#1992 - In the PROFILE, updated plot titles

Pull Request - State: closed - Opened by airenzp about 2 months ago

#1991 - violin overlay with survival term breaks

Issue - State: closed - Opened by xzhou82 about 2 months ago - 1 comment

#1990 - Implementation of additional topVE toggles

Pull Request - State: closed - Opened by robinpaul85 about 2 months ago

#1990 - Implementation of additional topVE toggles

Pull Request - State: open - Opened by robinpaul85 about 2 months ago

#1989 - Show more options for selected samples in the facet table

Pull Request - State: closed - Opened by creilly8 about 2 months ago - 3 comments

#1989 - Show more options for selected samples in the facet table

Pull Request - State: closed - Opened by creilly8 about 2 months ago - 3 comments

#1989 - Show more options for selected samples in the facet table

Pull Request - State: closed - Opened by creilly8 about 2 months ago - 3 comments

#1988 - Profile fixes

Pull Request - State: closed - Opened by airenzp about 2 months ago

#1988 - Profile fixes

Pull Request - State: closed - Opened by airenzp about 2 months ago

#1987 - create proper assay type term for termdbtest

Issue - State: closed - Opened by xzhou82 about 2 months ago

#1987 - create proper assay type term for termdbtest

Issue - State: closed - Opened by xzhou82 about 2 months ago

#1987 - create proper assay type term for termdbtest

Issue - State: closed - Opened by xzhou82 about 2 months ago

#1986 - Add options to the facet table on selection

Issue - State: open - Opened by creilly8 about 2 months ago

#1986 - Add options to the facet table on selection

Issue - State: closed - Opened by creilly8 about 2 months ago - 1 comment

#1986 - Add options to the facet table on selection

Issue - State: open - Opened by creilly8 about 2 months ago

#1985 - top mutated genes request returns genes with 0 rendered hits (only has CNV)

Issue - State: closed - Opened by siosonel about 2 months ago - 4 comments