Ecosyste.ms: Issues

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GitHub / statgen/pheweb issues and pull requests

#101 - Fix bad qq-rendering with over-wide vertical pval bins

Issue - State: closed - Opened by pjvandehaar about 7 years ago - 1 comment

#99 - Subsetting Manhattans

Issue - State: closed - Opened by sgagliano about 7 years ago - 2 comments
Labels: priority

#98 - Specify exactly which `.fields` to use to LZ.

Issue - State: closed - Opened by pjvandehaar over 7 years ago

#95 - Show a table of phenotypes

Issue - State: closed - Opened by pjvandehaar over 7 years ago - 5 comments
Labels: priority

#94 - Make pheno-vs-pheno comparisons

Issue - State: closed - Opened by pjvandehaar over 7 years ago - 3 comments

#93 - Make parser more comprehensive

Issue - State: closed - Opened by pjvandehaar over 7 years ago - 1 comment

#90 - Support `-h` for every subcommand

Issue - State: closed - Opened by pjvandehaar over 7 years ago

#86 - merge --star-is-phenocode with --simple-phenocode

Issue - State: closed - Opened by pjvandehaar over 7 years ago

#83 - Manhattan binning breaks down in snowstorms

Issue - State: closed - Opened by pjvandehaar over 7 years ago

#82 - Make a pheweb where people can upload GWAS

Issue - State: closed - Opened by pjvandehaar over 7 years ago

#79 - Improve multiprocessing code and progress display

Issue - State: closed - Opened by pjvandehaar almost 8 years ago - 1 comment

#77 - Improve the data-loading experience

Issue - State: closed - Opened by pjvandehaar almost 8 years ago

#70 - use Sardinia-specific LD

Issue - State: closed - Opened by sgagliano almost 8 years ago - 4 comments

#67 - Idle in make-manhattan step

Issue - State: closed - Opened by phuwanat almost 8 years ago - 12 comments

#66 - Add a script to add chr-pos-ref-alt to input files with only rsid

Issue - State: open - Opened by sgagliano almost 8 years ago - 2 comments

#64 - Improve installation

Issue - State: closed - Opened by pjvandehaar almost 8 years ago

#58 - Add toolbar button "Choose LD reference"

Issue - State: closed - Opened by pjvandehaar almost 8 years ago - 3 comments

#49 - Make genome-wide significance thresholds configurable

Issue - State: closed - Opened by pjvandehaar almost 8 years ago - 1 comment

#44 - Autocomplete should suggest shortest rather than longest

Issue - State: closed - Opened by pjvandehaar almost 8 years ago - 3 comments
Labels: priority

#41 - Get best-other-phenos for arbitrary regions, not just genes

Issue - State: closed - Opened by pjvandehaar almost 8 years ago

#36 - Apply correct styling to SVG exports

Issue - State: closed - Opened by pjvandehaar almost 8 years ago
Labels: priority

#32 - Hide tracebacks for known errors

Issue - State: closed - Opened by pjvandehaar almost 8 years ago

#29 - The set of genes in the annotations and the genes panel are different

Issue - State: closed - Opened by pjvandehaar almost 8 years ago - 2 comments

#26 - Add VEP annotation

Issue - State: closed - Opened by pjvandehaar almost 8 years ago - 1 comment
Labels: priority

#25 - Speed up LZ

Issue - State: closed - Opened by pjvandehaar almost 8 years ago