Ecosyste.ms: Issues

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GitHub / ssayols/rrvgo issues and pull requests

#28 - TreemapPlot error

Issue - State: closed - Opened by Maithy15 about 2 months ago - 2 comments

#27 - Change color of bubbles in scatterPlot()

Issue - State: closed - Opened by abrantesas 6 months ago - 1 comment

#26 - option "scores = NULL" is not working in reduceSimMatrix

Issue - State: closed - Opened by parkjooyoung99 7 months ago - 1 comment

#25 - Axis titles

Issue - State: closed - Opened by sophie-03 8 months ago - 1 comment

#24 - Understand reducedTerms output

Issue - State: closed - Opened by joanaviana 11 months ago - 2 comments

#24 - Understand reducedTerms output

Issue - State: closed - Opened by joanaviana 11 months ago - 2 comments

#23 - Fixed hardcoding of column names in getGoSize function.

Pull Request - State: closed - Opened by EinarBaldvin 11 months ago

#23 - Fixed hardcoding of column names in getGoSize function.

Pull Request - State: closed - Opened by EinarBaldvin 11 months ago

#22 - getGOsize

Issue - State: closed - Opened by MrToole about 1 year ago - 1 comment

#22 - getGOsize

Issue - State: closed - Opened by MrToole about 1 year ago - 1 comment

#21 - How to use output from EnrichR?

Issue - State: closed - Opened by TerezaClarence over 1 year ago - 1 comment

#21 - How to use output from EnrichR?

Issue - State: closed - Opened by TerezaClarence over 1 year ago - 1 comment

#20 - reduceSimMatrix

Issue - State: closed - Opened by Tima-Ze over 1 year ago - 1 comment

#20 - reduceSimMatrix

Issue - State: closed - Opened by Tima-Ze over 1 year ago - 1 comment

#19 - No terms were found in orgdb

Issue - State: closed - Opened by tamsinlh over 1 year ago - 7 comments

#19 - No terms were found in orgdb

Issue - State: closed - Opened by tamsinlh over 1 year ago - 7 comments

#18 - ont= "all"

Issue - State: open - Opened by ghs101 about 2 years ago - 1 comment

#18 - ont= "all"

Issue - State: open - Opened by ghs101 about 2 years ago - 1 comment

#17 - "size" parameter is ignored in scatterPlot

Issue - State: closed - Opened by RoganGrant over 2 years ago - 1 comment

#17 - "size" parameter is ignored in scatterPlot

Issue - State: closed - Opened by RoganGrant over 2 years ago - 1 comment

#16 - Reactome, Dorothea, GSEA

Issue - State: closed - Opened by Tommaso12 over 2 years ago - 2 comments

#16 - Reactome, Dorothea, GSEA

Issue - State: closed - Opened by Tommaso12 over 2 years ago - 2 comments

#15 - Is there a way of controlling what dots get labeled in the scatter plot?

Issue - State: closed - Opened by KTMD-plant about 3 years ago - 1 comment

#15 - Is there a way of controlling what dots get labeled in the scatter plot?

Issue - State: closed - Opened by KTMD-plant about 3 years ago - 1 comment

#14 - Cannot send `title` parameter to treemap::treemap()

Issue - State: closed - Opened by kkami1115 over 3 years ago - 5 comments

#14 - Cannot send `title` parameter to treemap::treemap()

Issue - State: closed - Opened by kkami1115 over 3 years ago - 5 comments

#13 - shows warnings when using `scatterPlot()`

Issue - State: closed - Opened by kkami1115 over 3 years ago - 1 comment

#13 - shows warnings when using `scatterPlot()`

Issue - State: closed - Opened by kkami1115 over 3 years ago - 1 comment

#12 - scatterPlot()

Issue - State: closed - Opened by rdona17 over 3 years ago - 2 comments

#12 - scatterPlot()

Issue - State: closed - Opened by rdona17 over 3 years ago - 2 comments

#11 - Release 3 13

Pull Request - State: closed - Opened by ssayols over 3 years ago

#11 - Release 3 13

Pull Request - State: closed - Opened by ssayols over 3 years ago

#10 - add keytype in calculateSimMatrix

Pull Request - State: closed - Opened by illumination-k over 3 years ago - 1 comment

#10 - add keytype in calculateSimMatrix

Pull Request - State: closed - Opened by illumination-k over 3 years ago - 1 comment

#9 - "frequency", "uniqueness" or "dispensability" terms

Issue - State: closed - Opened by tech-niche3 over 3 years ago - 2 comments

#9 - "frequency", "uniqueness" or "dispensability" terms

Issue - State: closed - Opened by tech-niche3 over 3 years ago - 2 comments

#8 - Bug in treemapPlot() function

Issue - State: closed - Opened by aa20g217 almost 4 years ago - 3 comments

#8 - Bug in treemapPlot() function

Issue - State: closed - Opened by aa20g217 almost 4 years ago - 3 comments

#7 - Create LICENSE

Pull Request - State: closed - Opened by ssayols almost 4 years ago

#7 - Create LICENSE

Pull Request - State: closed - Opened by ssayols almost 4 years ago

#6 - Bug fix for obsolete GO terms

Issue - State: open - Opened by RHReynolds almost 4 years ago - 3 comments

#6 - Bug fix for obsolete GO terms

Issue - State: open - Opened by RHReynolds almost 4 years ago - 3 comments

#5 - scatterplot ggplot object functionalities seem missing

Issue - State: closed - Opened by eliotbehr about 4 years ago - 4 comments

#5 - scatterplot ggplot object functionalities seem missing

Issue - State: closed - Opened by eliotbehr about 4 years ago - 4 comments

#4 - Error with custom OrgDB: authorize alternative keytype

Issue - State: closed - Opened by lassancejm about 4 years ago - 8 comments

#4 - Error with custom OrgDB: authorize alternative keytype

Issue - State: closed - Opened by lassancejm about 4 years ago - 8 comments

#2 - calculateSimMatrix orgdb error

Issue - State: closed - Opened by gaelanm over 4 years ago - 2 comments

#1 - reduceSimMatrix appears to apply threshold wrong way around?

Issue - State: closed - Opened by aedanr over 4 years ago - 3 comments