Ecosyste.ms: Issues

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GitHub / soft-matter/trackpy issues and pull requests

#676 - how to relink trajectories from an existing trajectory dataframe

Issue - State: open - Opened by alexlib over 3 years ago - 2 comments

#675 - New automated docs build needed

Issue - State: open - Opened by nkeim over 3 years ago - 1 comment

#674 - how to give trackpy location of features in text file

Issue - State: open - Opened by besbesmany over 3 years ago - 1 comment

#673 - I have text file of detected objects how to show trajectory

Issue - State: closed - Opened by besbesmany over 3 years ago

#672 - I want get car motion trajectory like next figure

Issue - State: closed - Opened by besbesmany over 3 years ago - 1 comment

#671 - Filter spurious trajectories shows After: 0

Issue - State: closed - Opened by besbesmany over 3 years ago - 2 comments

#670 - how to connect trackpy-examples with trackpy, what is the hierarchy ?

Issue - State: closed - Opened by besbesmany over 3 years ago - 2 comments

#669 - Color-coded trajectories tangling together

Issue - State: closed - Opened by annezhou94 over 3 years ago - 2 comments

#668 - Velocity of each particle?

Issue - State: closed - Opened by rjoliver33 over 3 years ago

#667 - 'UserWarning: Image is completely black' on valid image.

Issue - State: open - Opened by BptGrm over 3 years ago - 3 comments

#666 - trackpy.locate returns clarification

Issue - State: open - Opened by BptGrm over 3 years ago - 3 comments
Labels: needs PR

#665 - How to eliminate overlapped objects?

Issue - State: closed - Opened by yongshuo-Z over 3 years ago - 1 comment

#664 - Fix two broken links in doc/index.rst

Pull Request - State: closed - Opened by magnunor over 3 years ago - 1 comment

#663 - Is there a way to show particle index when using tp.annotate?

Issue - State: closed - Opened by hmx0979 over 3 years ago

#662 - Silencing print statments in link_df

Issue - State: closed - Opened by loomcode over 3 years ago - 2 comments

#661 - Add zenodo metadata file

Pull Request - State: closed - Opened by caspervdw over 3 years ago

#660 - Doc cleanup

Pull Request - State: closed - Opened by caspervdw over 3 years ago - 5 comments

#659 - Fix minor errors in docs

Issue - State: open - Opened by nkeim over 3 years ago - 2 comments
Labels: needs PR, trackpy-examples

#658 - DOC: add full API reference using Sphinx recursive option

Pull Request - State: closed - Opened by rbnvrw over 3 years ago - 1 comment

#657 - ENH: Add Linker.SORT_TRAJECTORIES option

Pull Request - State: closed - Opened by nkeim over 3 years ago

#656 - Change minimum versions and remove compatibility fixes

Pull Request - State: closed - Opened by caspervdw over 3 years ago - 5 comments

#655 - Fix segfault after pytest on Py3.7, pip environment

Issue - State: closed - Opened by caspervdw over 3 years ago - 2 comments
Labels: bug

#653 - Need different diameter in tp.locate on different computer?

Issue - State: closed - Opened by hmx0979 over 3 years ago - 7 comments

#649 - Radius vs. radius of gyration

Issue - State: closed - Opened by meredithefay over 3 years ago - 3 comments
Labels: question

#648 - API/DOC: Expose reconnect_traj_patch()

Pull Request - State: closed - Opened by nkeim over 3 years ago - 1 comment

#647 - Cannot find docs on reconnect_traj_patch.

Issue - State: closed - Opened by loomcode over 3 years ago - 4 comments

#646 - Skip pytables test if HDF5 version is 1.8.5-patch1

Pull Request - State: closed - Opened by caspervdw over 3 years ago - 2 comments

#645 - Update trackpy's version constraints

Issue - State: closed - Opened by caspervdw over 3 years ago - 1 comment

#642 - TestBrightfieldRing fails on all but Py3.9 NumPy1.19 envs

Issue - State: closed - Opened by caspervdw over 3 years ago - 3 comments

#639 - Non-circular search space

Issue - State: open - Opened by thorstenwagner almost 4 years ago - 2 comments
Labels: question

#638 - Questions about using the pair_correlation_2d function

Issue - State: open - Opened by stevenvanuytsel almost 4 years ago - 2 comments
Labels: question

#635 - Trackpy sub-pixel bias

Issue - State: closed - Opened by praptibajaj28 almost 4 years ago - 2 comments
Labels: question

#629 - VisibleDeprecationWarning

Issue - State: closed - Opened by ivanovmg about 4 years ago - 1 comment

#628 - Refactor function locate via helper class ParticlesLocator

Pull Request - State: closed - Opened by ivanovmg about 4 years ago

#626 - Equations not rendered in tutorials

Issue - State: closed - Opened by nkeim over 4 years ago - 1 comment

#616 - Drop official Python 2 support

Issue - State: closed - Opened by nkeim over 4 years ago

#610 - Parallel processing of frames with batch stalls on Windows

Issue - State: closed - Opened by Jdogzz over 4 years ago - 24 comments

#601 - Add note about tracks sorting to release notes

Issue - State: closed - Opened by nkeim over 4 years ago - 13 comments

#599 - How to determine MAX_SUB_NET_SIZE?

Issue - State: open - Opened by loomcode over 4 years ago - 7 comments

#554 - Eccentricity Calculation

Issue - State: open - Opened by czimm79 over 5 years ago - 8 comments

#454 - Trackpy-force

Issue - State: closed - Opened by caspervdw about 7 years ago - 1 comment

#352 - ENH: Standard deviation calculation for emsd()

Pull Request - State: closed - Opened by vivarose over 8 years ago - 13 comments

#349 - Errorbars on ensemble MSD plot

Issue - State: open - Opened by vivarose over 8 years ago - 14 comments

#265 - look into using skimage's moment computations

Issue - State: open - Opened by tacaswell about 9 years ago

#260 - Investigate normalization questions raised in #239

Issue - State: open - Opened by danielballan over 9 years ago

#243 - Read and write files from OpenPTV

Issue - State: open - Opened by danielballan over 9 years ago - 4 comments

#177 - Colorby='frame' not working

Issue - State: closed - Opened by kmsouthard about 10 years ago - 22 comments