Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / snayfach/MicrobeCensus issues and pull requests

#34 - This code is definitely out of date.

Issue - State: open - Opened by Dr-Doomhammer 6 months ago - 2 comments

#33 - does genome equivalents mean bacteria cell numbers

Issue - State: open - Opened by diego00012138 12 months ago - 1 comment

#31 - differences with other normalization methods

Issue - State: closed - Opened by sapuizait about 2 years ago - 2 comments

#30 - Something wrong when put 'python setup.py install'

Issue - State: closed - Opened by Rooobben about 2 years ago - 1 comment

#29 - "Could not import module 'numpy'"

Issue - State: closed - Opened by smurdock-UVic over 2 years ago - 3 comments

#28 - TypeError: 'NoneType' object is not iterable

Issue - State: closed - Opened by cookiemonsterxxm almost 5 years ago - 5 comments

#27 - MicrobeCensus is not using all the reads when set to a large number

Issue - State: closed - Opened by jolespin about 5 years ago - 3 comments

#26 - question: calculation of RPKG

Issue - State: closed - Opened by jzrapp about 5 years ago - 1 comment

#25 - making sense of results...

Issue - State: closed - Opened by jzrapp over 5 years ago - 3 comments

#24 - How the performance would be for metatranscriptomes?

Issue - State: closed - Opened by SilentGene almost 6 years ago - 2 comments

#23 - Gene Sequences in Fasta

Issue - State: closed - Opened by dcdanko over 6 years ago - 2 comments

#22 - problem reading multiple files

Issue - State: closed - Opened by slhogle over 6 years ago - 9 comments

#21 - Fix #20 for Python 2/3 compatibility

Pull Request - State: closed - Opened by nigiord over 6 years ago - 1 comment

#20 - Python2 dependency in conda

Issue - State: closed - Opened by nigiord over 6 years ago - 1 comment

#19 - Test failed

Issue - State: closed - Opened by slschnorr almost 7 years ago - 3 comments

#18 - could not convert string to float: FIRM56_P641593085

Issue - State: closed - Opened by chengdai almost 7 years ago - 4 comments

#17 - Installation on a cluster redux

Issue - State: closed - Opened by sturne29 almost 7 years ago - 6 comments

#16 - Fix exception syntax according to PEP-3110

Pull Request - State: closed - Opened by boulund over 7 years ago

#15 - Pip install error from official 1.1.0 tarball

Issue - State: closed - Opened by boulund over 7 years ago - 4 comments

#14 - training.py: Unused test set?

Issue - State: closed - Opened by psaxcode almost 8 years ago - 3 comments

#13 - Doc request: TMPDIR

Issue - State: closed - Opened by taltman about 8 years ago - 1 comment

#12 - installation on a cluster

Issue - State: closed - Opened by Thomieh73 almost 9 years ago - 2 comments

#11 - temp files when program exits of error

Issue - State: closed - Opened by jenmobberley almost 9 years ago - 1 comment

#10 - MC should use the Unix exit code convention

Issue - State: closed - Opened by taltman over 9 years ago - 1 comment

#9 - MicrobeCensus should use requested # of cores

Issue - State: closed - Opened by taltman almost 10 years ago - 1 comment

#8 - run_microbe_census.py crashes when input file not found

Issue - State: closed - Opened by taltman almost 10 years ago - 1 comment

#7 - Feature Request: command line parameter to control subsampling

Issue - State: closed - Opened by taltman almost 10 years ago - 1 comment

#6 - You're living in the past, man

Issue - State: closed - Opened by taltman almost 10 years ago - 1 comment

#5 - Feature Request: Add support for DIAMOND

Issue - State: closed - Opened by taltman almost 10 years ago - 1 comment

#4 - MicrobeCensus crashes, "ValueError: Sequence and quality captions differ."

Issue - State: closed - Opened by taltman almost 10 years ago - 17 comments

#3 - Could not import module 'pkg_resources'

Issue - State: closed - Opened by tallnutt almost 10 years ago - 2 comments

#2 - Update setup.py

Pull Request - State: closed - Opened by lowks almost 10 years ago

#1 - Handling errors with command line parameters

Issue - State: closed - Opened by LBragg over 10 years ago - 1 comment