Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / smped/ngsReports issues and pull requests

#44 - Error in .getSeqDuplicationLevels(fqcLines) when running in rstudio server

Issue - State: closed - Opened by fabio-marcelo about 1 year ago - 4 comments

#43 - Modify `importNgsLogs()` to include all elements

Issue - State: open - Opened by smped over 1 year ago

#42 - Devlop QcData object class

Issue - State: open - Opened by smped over 1 year ago

#41 - Revise FastqcDataList to include metadata

Issue - State: open - Opened by smped over 1 year ago

#40 - Bug in plotSeqContent

Issue - State: closed - Opened by smped over 1 year ago - 1 comment

#39 - Facility to ingest and process rnaseqc2 metrics file

Issue - State: closed - Opened by Rohit-Satyam over 1 year ago - 2 comments

#38 - When creating Plotly heatmaps Legend Disappears

Issue - State: closed - Opened by Rohit-Satyam almost 2 years ago - 1 comment

#37 - ngsReports unable to handle MarkDuplicateSpark Metrices file

Issue - State: closed - Opened by Rohit-Satyam about 2 years ago - 2 comments

#36 - Bugfix in plotOverRep

Issue - State: closed - Opened by smped about 2 years ago - 1 comment

#35 - importNgsLogs Not working for type = "duplicationMetrics"

Issue - State: closed - Opened by Teezi over 2 years ago - 9 comments

#34 - import bowtie2 report incomplete

Issue - State: closed - Opened by LaureTomas over 2 years ago - 10 comments

#33 - targetsDF

Pull Request - State: closed - Opened by CMWbio over 2 years ago

#32 - plotBaseQuals: x-axis labels

Issue - State: closed - Opened by smped over 3 years ago - 1 comment

#31 - Return data instead of plotting

Issue - State: closed - Opened by legbar about 4 years ago - 2 comments

#30 - feature request

Issue - State: closed - Opened by scseekers about 4 years ago - 2 comments

#29 - Add method for FastqcDataList which takes lists of FastqcData objects

Issue - State: closed - Opened by smped about 4 years ago - 1 comment

#28 - Add `fqName<-`

Issue - State: closed - Opened by smped about 4 years ago - 1 comment

#27 - Bug in `plotOverrep()`

Issue - State: closed - Opened by smped over 4 years ago - 1 comment

#26 - importNgsLogs Not working for type = "featureCounts"

Issue - State: closed - Opened by smped over 4 years ago - 1 comment

#25 - plotAlignmentSummary not working with STAR

Issue - State: closed - Opened by smped over 4 years ago - 1 comment

#24 - README: link to build status page instead of badge

Pull Request - State: closed - Opened by kortschak almost 5 years ago

#23 - README: link to build status page instead of badge

Pull Request - State: closed - Opened by kortschak almost 5 years ago - 5 comments

#22 - Error in .makeLabels()

Issue - State: closed - Opened by edgardomortiz almost 5 years ago - 3 comments

#21 - Add output directory to `writeHtmlReport`

Issue - State: closed - Opened by smped about 5 years ago - 1 comment

#20 - Check Import Functions

Issue - State: closed - Opened by smped about 5 years ago - 2 comments

#19 - Error in plotFastqcPCA()

Issue - State: closed - Opened by smped over 5 years ago - 3 comments
Labels: bug

#18 - SP revisions to plotFastqcPCA

Pull Request - State: closed - Opened by smped over 5 years ago - 1 comment

#17 - Add plot for sequence length distribution

Issue - State: closed - Opened by edgardomortiz over 5 years ago - 4 comments

#16 - GC content theoretical distribution for plant

Issue - State: closed - Opened by CharlotteSai over 5 years ago - 6 comments

#15 - Bug in imprtNgsLogs

Issue - State: closed - Opened by smped over 5 years ago

#14 - plotFastqcPCA: Fix NOTES from R CMD Check

Issue - State: closed - Opened by smped over 5 years ago - 1 comment

#13 - Add line plot to plotDupLevels

Issue - State: closed - Opened by smped over 5 years ago - 1 comment
Labels: enhancement

#12 - Fix usage of `dplyr::funs()`

Issue - State: closed - Opened by smped over 5 years ago

#11 - Error in vignette

Issue - State: closed - Opened by smped over 5 years ago

#10 - Scrolling tables in HTML report

Issue - State: closed - Opened by a-lud over 5 years ago - 1 comment

#9 - `plotGcContent(counts = TRUE)`

Issue - State: closed - Opened by smped about 6 years ago - 1 comment

#8 - generating report failed

Issue - State: closed - Opened by lmanchon about 6 years ago - 5 comments

#7 - error on import

Issue - State: closed - Opened by JulianSpagnuolo over 6 years ago - 2 comments

#6 - error in writeHtmlReport

Issue - State: closed - Opened by tothuhien over 6 years ago - 4 comments

#5 - Adapter Content in App

Issue - State: closed - Opened by smped over 6 years ago

#4 - Update README.md

Pull Request - State: closed - Opened by smped over 6 years ago

#3 - A few suggestions

Issue - State: closed - Opened by sa-lee about 7 years ago - 1 comment

#2 - Dendrogram for plotSequenceContent()

Issue - State: closed - Opened by smped about 7 years ago - 1 comment

#1 - Choose Files is glitchy

Issue - State: closed - Opened by smped over 7 years ago - 1 comment