Ecosyste.ms: Issues

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GitHub / smgogarten/GWASTools issues and pull requests

#18 - how to get start and end position of the locus

Issue - State: closed - Opened by ElicSY 4 months ago - 1 comment

#17 - Update snpIDs in output of assocRegression to reflect the rsIDs

Issue - State: closed - Opened by niyati1211 9 months ago - 1 comment

#16 - Can not use GdsGenotypeReader to read a gds file

Issue - State: closed - Opened by wangshuang2024 12 months ago - 1 comment

#15 - createDataFile returns empty diag.geno.file

Issue - State: closed - Opened by ryshi06 about 1 year ago - 6 comments

#14 - Convert Affymetrix.Rnw to Affymetrix.Rmd

Pull Request - State: closed - Opened by sonali8434 over 1 year ago - 3 comments

#13 - Request to Replace Sweave Vignettes with R Markdown

Issue - State: open - Opened by sonali8434 over 1 year ago - 5 comments

#12 - GdsGenotypeReader error

Issue - State: closed - Opened by EDISON2022W almost 2 years ago

#11 - Get CHR & SNP POS using rs ids

Issue - State: closed - Opened by Mahantesh-Biradar about 3 years ago - 1 comment

#10 - GdsGenotypeReader for >22 autosomal chromosomes

Issue - State: closed - Opened by KSkyeD over 3 years ago

#9 - Get NAs for Est, SE, Wald.stat and Wald.pval

Issue - State: closed - Opened by ryshi06 over 3 years ago - 1 comment

#8 - Firth penalized likelihood function in assocCoxPH

Issue - State: open - Opened by ryshi06 over 3 years ago - 2 comments

#7 - Allow fork

Pull Request - State: closed - Opened by smgogarten almost 5 years ago

#6 - Using 'Cluster()' option of CoxPH in AssocCoxPH

Issue - State: closed - Opened by Soo-Heon almost 5 years ago - 2 comments

#5 - use allow.fork in openfn.gds

Issue - State: closed - Opened by smgogarten about 5 years ago - 1 comment

#4 - not able to generate scan annotation for snp matrix object

Issue - State: closed - Opened by treebreeder about 5 years ago - 2 comments

#3 - Enabling parallel processing and faster processing of intensity files

Pull Request - State: closed - Opened by DanielEWeeks over 5 years ago - 1 comment

#2 - Vcf check feature

Pull Request - State: closed - Opened by sarahcn almost 7 years ago

#1 - Mendel err bugfix

Pull Request - State: closed - Opened by sarahcn almost 7 years ago