Ecosyste.ms: Issues

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GitHub / slowkow/CENTIPEDE.tutorial issues and pull requests

#18 - error if needed with Mca and categorical variables

Issue - State: closed - Opened by FedericaPhd about 2 years ago - 1 comment

#16 - Meaning of "score" column in the output

Issue - State: closed - Opened by rdbcasillas over 5 years ago - 1 comment

#15 - Error in quantile.default(x, c(TrimP, 1 - TrimP))

Issue - State: open - Opened by hugch2020 almost 6 years ago - 3 comments

#14 - Conservation analysis (site_cons) fails

Issue - State: closed - Opened by KrRi4 over 6 years ago - 1 comment
Labels: question

#13 - gunzip -c chr*.fa.masked > hg19.fa

Issue - State: open - Opened by zhenzuo2 over 6 years ago - 5 comments
Labels: question

#12 - About FIMO finding putative TFBS in the tutorial.

Issue - State: open - Opened by alexyfyf over 6 years ago - 3 comments
Labels: question

#11 - Cut-site matrix generation

Issue - State: closed - Opened by gouthamatla over 6 years ago

#10 - object 'sequence.name' not found

Issue - State: closed - Opened by amirshams84 almost 7 years ago - 7 comments

#9 - Center the input matrix around the motif

Issue - State: closed - Opened by danrlu almost 7 years ago - 4 comments

#8 - Error in if (sum(idx) == 0) { : missing value where TRUE/FALSE needed

Issue - State: open - Opened by zhuangfjnu about 7 years ago - 7 comments

#7 - Error at FIMO --parse-genomic-coord

Issue - State: closed - Opened by rbronste almost 8 years ago

#6 - Issue #4

Pull Request - State: closed - Opened by alexg9010 over 8 years ago - 1 comment

#5 - fix issue #4

Pull Request - State: closed - Opened by alexg9010 almost 9 years ago

#4 - Shifted forward and reverse dip

Issue - State: closed - Opened by alexg9010 almost 9 years ago - 2 comments

#3 - Error at matrix2meme step

Issue - State: closed - Opened by sandertan almost 9 years ago - 2 comments

#2 - centipede fitting error

Issue - State: closed - Opened by ahorvath about 9 years ago - 8 comments

#1 - MOODS

Issue - State: closed - Opened by slowkow over 9 years ago
Labels: enhancement