Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / sintef/pyopia issues and pull requests

#101 - 'pandas' has no attribute 'datetime'

Issue - State: closed - Opened by emlynjdavies over 1 year ago
Labels: bug, priority-high

#101 - 'pandas' has no attribute 'datetime'

Issue - State: closed - Opened by emlynjdavies over 1 year ago
Labels: bug, priority-high

#100 - Update README.md

Pull Request - State: closed - Opened by sarigiering over 1 year ago - 1 comment

#100 - Update README.md

Pull Request - State: closed - Opened by sarigiering over 1 year ago - 1 comment

#99 - Installation description

Issue - State: closed - Opened by sarigiering over 1 year ago - 3 comments
Labels: documentation, priority-high

#99 - Installation description

Issue - State: closed - Opened by sarigiering over 1 year ago - 3 comments
Labels: documentation, priority-high

#98 - Addresses timestamp handling for non list-holo images

Pull Request - State: closed - Opened by animmosmith over 1 year ago

#98 - Addresses timestamp handling for non list-holo images

Pull Request - State: closed - Opened by animmosmith over 1 year ago

#97 - Error in processing iCPR formatted holograms

Issue - State: closed - Opened by KaiCursons over 1 year ago

#96 - pixel size should be included in output files

Issue - State: closed - Opened by animmosmith almost 2 years ago - 5 comments
Labels: bug, priority-high

#96 - pixel size should be included in output files

Issue - State: closed - Opened by animmosmith almost 2 years ago - 5 comments
Labels: bug, priority-high

#95 - removes unused functions from process

Pull Request - State: closed - Opened by animmosmith almost 2 years ago - 1 comment

#95 - removes unused functions from process

Pull Request - State: closed - Opened by animmosmith almost 2 years ago - 1 comment

#94 - Enhanced regionprops

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#94 - Enhanced regionprops

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#93 - Holo speedup

Pull Request - State: closed - Opened by animmosmith almost 2 years ago - 1 comment

#93 - Holo speedup

Pull Request - State: closed - Opened by animmosmith almost 2 years ago - 1 comment

#92 - Holo enhancements

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#92 - Holo enhancements

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#91 - the name imc is used for different things, with different datatypes

Issue - State: closed - Opened by nordam almost 2 years ago - 3 comments
Labels: bug, priority-high

#90 - Switch from using print statements to using a logger

Issue - State: closed - Opened by nordam almost 2 years ago
Labels: patch / enhancement, priority-low

#90 - Switch from using print statements to using a logger

Issue - State: closed - Opened by nordam almost 2 years ago
Labels: patch / enhancement, priority-low

#89 - Holo pipeline commentary

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#89 - Holo pipeline commentary

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#88 - adds background creation to Initial pipeline step

Pull Request - State: closed - Opened by animmosmith almost 2 years ago - 2 comments

#88 - adds background creation to Initial pipeline step

Pull Request - State: closed - Opened by animmosmith almost 2 years ago - 2 comments

#86 - Fix filename

Pull Request - State: closed - Opened by animmosmith almost 2 years ago - 2 comments

#86 - Fix filename

Pull Request - State: closed - Opened by animmosmith almost 2 years ago - 2 comments

#85 - Make a method to handle bad images e.g. issue with lighting

Issue - State: open - Opened by emlynjdavies almost 2 years ago
Labels: priority-low, minor new feature

#84 - ReadTheDocs memory error

Pull Request - State: closed - Opened by emlynjdavies almost 2 years ago - 1 comment
Labels: documentation

#84 - ReadTheDocs memory error

Pull Request - State: closed - Opened by emlynjdavies almost 2 years ago - 1 comment
Labels: documentation

#83 - Pipeline processing progress

Issue - State: closed - Opened by animmosmith almost 2 years ago - 2 comments
Labels: patch / enhancement

#83 - Pipeline processing progress

Issue - State: closed - Opened by animmosmith almost 2 years ago - 2 comments
Labels: patch / enhancement

#82 - Read lisst holo info

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#81 - Statextract light input

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#81 - Statextract light input

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#80 - readthedocs not building due to memory errors

Issue - State: closed - Opened by emlynjdavies almost 2 years ago - 1 comment
Labels: bug, documentation

#79 - Add Plotting module

Pull Request - State: closed - Opened by emlynjdavies almost 2 years ago - 1 comment

#79 - Add Plotting module

Pull Request - State: closed - Opened by emlynjdavies almost 2 years ago - 1 comment

#78 - Zsc

Pull Request - State: closed - Opened by animmosmith almost 2 years ago
Labels: patch / enhancement

#78 - Zsc

Pull Request - State: closed - Opened by animmosmith almost 2 years ago
Labels: patch / enhancement

#77 - fixes arbitrary input file ordering to sorted list

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#77 - fixes arbitrary input file ordering to sorted list

Pull Request - State: closed - Opened by animmosmith almost 2 years ago

#76 - exported ROIs from silcam data are all zeros

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment
Labels: bug, priority-high

#76 - exported ROIs from silcam data are all zeros

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment
Labels: bug, priority-high

#75 - holo timestamps

Issue - State: closed - Opened by emlynjdavies about 2 years ago
Labels: priority-high

#75 - holo timestamps

Issue - State: closed - Opened by emlynjdavies about 2 years ago
Labels: priority-high

#74 - Holo focus

Pull Request - State: closed - Opened by animmosmith about 2 years ago

#74 - Holo focus

Pull Request - State: closed - Opened by animmosmith about 2 years ago

#73 - Holo focus

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago

#73 - Holo focus

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago

#71 - Consider moving logic of folder and file creation to a higher level instead of nested inside functions

Issue - State: closed - Opened by emlynjdavies about 2 years ago
Labels: patch / enhancement, priority-low

#71 - Consider moving logic of folder and file creation to a higher level instead of nested inside functions

Issue - State: closed - Opened by emlynjdavies about 2 years ago
Labels: patch / enhancement, priority-low

#70 - update the docstrings in Reconstruct

Issue - State: closed - Opened by emlynjdavies about 2 years ago

#70 - update the docstrings in Reconstruct

Issue - State: closed - Opened by emlynjdavies about 2 years ago

#69 - holo focus refinement

Issue - State: closed - Opened by animmosmith about 2 years ago - 1 comment
Labels: patch / enhancement, priority-medium

#69 - holo focus refinement

Issue - State: closed - Opened by animmosmith about 2 years ago - 1 comment
Labels: patch / enhancement, priority-medium

#68 - Holo focus

Pull Request - State: closed - Opened by animmosmith about 2 years ago

#68 - Holo focus

Pull Request - State: closed - Opened by animmosmith about 2 years ago

#67 - Consider handling of image types from different instruments

Issue - State: closed - Opened by animmosmith about 2 years ago - 6 comments
Labels: patch / enhancement

#67 - Consider handling of image types from different instruments

Issue - State: closed - Opened by animmosmith about 2 years ago - 6 comments
Labels: patch / enhancement

#66 - Holo background test

Pull Request - State: closed - Opened by animmosmith about 2 years ago - 1 comment
Labels: patch / enhancement

#65 - converted steps_string that is saved as metadata may lose information on functions objects passed to step classes

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment
Labels: bug, patch / enhancement, question

#65 - converted steps_string that is saved as metadata may lose information on functions objects passed to step classes

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment
Labels: bug, patch / enhancement, question

#64 - 56 implement moving background in pipeline

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago
Labels: patch / enhancement

#64 - 56 implement moving background in pipeline

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago
Labels: patch / enhancement

#63 - current pipelines will keep appending particles to the output stats file, even if they have already been analysed

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment
Labels: bug, patch / enhancement

#63 - current pipelines will keep appending particles to the output stats file, even if they have already been analysed

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment
Labels: bug, patch / enhancement

#62 - implements download of folder of test holograms

Pull Request - State: closed - Opened by animmosmith about 2 years ago

#61 - Data dict docs

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago
Labels: documentation, patch / enhancement

#61 - Data dict docs

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago
Labels: documentation, patch / enhancement

#60 - revert to tensorflow 2.10.0 to test rtd build

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago

#60 - revert to tensorflow 2.10.0 to test rtd build

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago

#59 - implement a basic static background

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago

#59 - implement a basic static background

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago

#58 - add ReturnData class

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment

#58 - add ReturnData class

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment

#57 - allow return of data dict instead of stats at the end of pipeline.run() for debugging / dev purposes

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment
Labels: patch / enhancement

#57 - allow return of data dict instead of stats at the end of pipeline.run() for debugging / dev purposes

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment
Labels: patch / enhancement

#56 - implement moving background in pipeline

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment
Labels: patch / enhancement

#56 - implement moving background in pipeline

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 1 comment
Labels: patch / enhancement

#55 - implement static background correction in pipeline

Issue - State: closed - Opened by emlynjdavies about 2 years ago
Labels: patch / enhancement

#55 - implement static background correction in pipeline

Issue - State: closed - Opened by emlynjdavies about 2 years ago
Labels: patch / enhancement

#54 - 53 make function for default steps for silcam

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago
Labels: patch / enhancement

#54 - 53 make function for default steps for silcam

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago
Labels: patch / enhancement

#53 - make function for default steps for silcam

Issue - State: closed - Opened by emlynjdavies about 2 years ago
Labels: patch / enhancement

#53 - make function for default steps for silcam

Issue - State: closed - Opened by emlynjdavies about 2 years ago
Labels: patch / enhancement

#52 - Test pipeline

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago
Labels: documentation, patch / enhancement

#52 - Test pipeline

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago
Labels: documentation, patch / enhancement

#51 - specify numpy version

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago
Labels: bug

#51 - specify numpy version

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago
Labels: bug

#50 - numpy version needs specifying

Issue - State: closed - Opened by emlynjdavies about 2 years ago
Labels: bug, priority-high

#50 - numpy version needs specifying

Issue - State: closed - Opened by emlynjdavies about 2 years ago
Labels: bug, priority-high

#49 - add arg docsting to pipeline.run

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago

#49 - add arg docsting to pipeline.run

Pull Request - State: closed - Opened by emlynjdavies about 2 years ago

#48 - establish some high-level tests

Issue - State: closed - Opened by emlynjdavies about 2 years ago - 2 comments
Labels: patch / enhancement