Ecosyste.ms: Issues

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GitHub / shixiangwang/sigflow issues and pull requests

#34 - Cannot set hg38 for genome in container model

Issue - State: closed - Opened by jpcartailler 11 months ago - 4 comments

#33 - what is the input format of rearrangement signature ?

Issue - State: closed - Opened by Aimee2018 over 2 years ago - 5 comments

#31 - Insufficient values in manual scale. 11 needed but only 9 provided.

Issue - State: closed - Opened by YingYa over 3 years ago - 6 comments
Labels: bug

#30 - cannot open URL 'https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh'

Issue - State: closed - Opened by YingYa almost 4 years ago - 10 comments
Labels: good first issue

#29 - /usr/local/bin suggestion for installing

Issue - State: closed - Opened by ahorn720 about 4 years ago - 1 comment

#28 - NOTION

Issue - State: closed - Opened by ShixiangWang about 4 years ago
Labels: documentation

#27 - Next release plan

Issue - State: closed - Opened by ShixiangWang about 4 years ago - 1 comment
Labels: enhancement

#26 - Found another reference mistake

Pull Request - State: closed - Opened by PalashPandey about 4 years ago - 3 comments

#25 - Update sigflow.R

Pull Request - State: closed - Opened by PalashPandey about 4 years ago - 3 comments

#24 - Absolute copy number caller type CNVkit

Issue - State: closed - Opened by TnakaNY over 4 years ago - 2 comments

#23 - Mutational Signature Extraction Best Practice Implementation

Issue - State: closed - Opened by ShixiangWang over 4 years ago
Labels: enhancement

#22 - Add release tags if build pass

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 2 comments
Labels: documentation

#21 - copy select plot from sigprofiler to result directory

Issue - State: closed - Opened by ShixiangWang over 4 years ago
Labels: enhancement

#20 - New auto-extract methods

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 2 comments
Labels: enhancement

#19 - Update README

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 3 comments
Labels: documentation

#18 - A new cluster subcommand to cluster specified clusters

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 1 comment
Labels: enhancement

#17 - Check the docker build error in local machine: failed at 'test_vcf' in mode 'MAF'

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 1 comment
Labels: bug, help wanted

#16 - An extra command for simulation study

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 1 comment
Labels: enhancement

#15 - bayesian NMF 和 sigprofiler 输出时将表格也输出

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 2 comments
Labels: enhancement

#14 - Support CN mode in fit

Issue - State: closed - Opened by ShixiangWang over 4 years ago
Labels: enhancement

#13 - 增加一个 show 命令

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 1 comment
Labels: enhancement

#12 - Create a new release v1.1

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 5 comments
Labels: enhancement

#11 - fit 和 bt 支持指定提取的 signature index

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 3 comments
Labels: enhancement

#10 - MAF mode 提取失败了，需要检查下是不是有问题。

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 1 comment
Labels: question

#9 - 部署到 hiplot 上

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 1 comment
Labels: enhancement

#8 - 文章准备：框架和模板

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 3 comments
Labels: documentation

#7 - extract 支持 sigprofiler

Issue - State: closed - Opened by ShixiangWang over 4 years ago
Labels: enhancement

#6 - 判断顺序都反了

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 1 comment
Labels: bug

#5 - Handle possible hypermutation in SBS/DBS/ID?

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 1 comment
Labels: help wanted

#4 - 使用容器技术进行封装

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 6 comments
Labels: enhancement

#3 - 完成基本功能并部署到 hiplot

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 1 comment

#2 - 名字显示

Issue - State: closed - Opened by ShixiangWang over 4 years ago - 1 comment

#1 - 参数接收与解析

Issue - State: closed - Opened by ShixiangWang over 4 years ago