Ecosyste.ms: Issues

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GitHub / shenlab-sinai/region_analysis issues and pull requests

#36 - fixing typo in readme

Pull Request - State: closed - Opened by sebastian-burlacu over 4 years ago

#35 - Fixed typo "isntall --> install"

Pull Request - State: open - Opened by sebastian-burlacu over 5 years ago

#34 - hg38 genome support?

Issue - State: open - Opened by xflicsu about 7 years ago - 1 comment

#33 - rice genome annotation(version7)

Issue - State: open - Opened by mforoozani1 over 8 years ago

#32 - OverflowError with test file

Issue - State: open - Opened by MarcusMGSS over 8 years ago - 2 comments

#31 - Error in feature annotation for -ve strand

Issue - State: closed - Opened by eddielohyh about 9 years ago - 1 comment

#30 - sacCer3 genome for diffReps

Issue - State: open - Opened by mayre over 9 years ago - 3 comments

#29 - Rattus norvegicus RGSC 6.0/rn6 genome database

Issue - State: open - Opened by alussier17 over 9 years ago - 8 comments

#28 - Maize_GenomeB73v3_database

Issue - State: open - Opened by Johan35 almost 10 years ago - 1 comment

#27 - Arabidopsis thaliana TAIR10

Issue - State: closed - Opened by Turckie about 10 years ago - 1 comment

#26 - Skip blank lines when transforming an input file

Issue - State: closed - Opened by lishen over 10 years ago
Labels: bug

#25 - Request for support poplar genome

Issue - State: closed - Opened by stunlay over 10 years ago - 12 comments

#24 - Genome ID is not unique across the database

Issue - State: closed - Opened by lishen over 10 years ago - 1 comment
Labels: bug, question

#23 - No refseq genome info for sacCer3

Issue - State: closed - Opened by lishen over 10 years ago - 2 comments

#22 - Error on panTro4.cgi.bed for Ensembl database

Issue - State: closed - Opened by lishen over 10 years ago - 2 comments

#21 - Pull request

Pull Request - State: closed - Opened by ny-shao over 10 years ago

#20 - Update with annotationdb.py and setup.py

Pull Request - State: closed - Opened by ny-shao over 10 years ago

#19 - Develop

Pull Request - State: closed - Opened by ny-shao over 10 years ago

#18 - Code beautification

Issue - State: closed - Opened by lishen over 10 years ago

#17 - Code beautification

Issue - State: closed - Opened by lishen over 10 years ago - 1 comment
Labels: enhancement, documentation

#16 - Transfer optparse library to argparse library

Issue - State: closed - Opened by ny-shao over 10 years ago
Labels: enhancement

#15 - Usage being displayed twice with --help

Issue - State: closed - Opened by lishen over 10 years ago
Labels: bug

#14 - Wiki for full annotation

Issue - State: open - Opened by lishen over 10 years ago
Labels: enhancement, documentation

#13 - Wiki for full annotation

Issue - State: closed - Opened by lishen over 10 years ago

#12 - Installation instructions missing

Issue - State: closed - Opened by lishen over 10 years ago
Labels: documentation

#11 - Python test failed

Issue - State: closed - Opened by lishen almost 11 years ago - 11 comments
Labels: bug

#10 - Show meta-info about the genome annotation

Issue - State: closed - Opened by lishen almost 11 years ago
Labels: enhancement

#9 - Missing first line of genomic coordinates

Issue - State: closed - Opened by lishen almost 11 years ago
Labels: bug

#8 - Unit test

Issue - State: closed - Opened by lishen almost 11 years ago
Labels: enhancement

#7 - Example data

Issue - State: closed - Opened by lishen almost 11 years ago
Labels: enhancement

#6 - Incomplete genome information

Issue - State: closed - Opened by lishen almost 11 years ago
Labels: bug, enhancement, invalid

#5 - Genome name mismatches

Issue - State: closed - Opened by lishen almost 11 years ago
Labels: bug, invalid, documentation

#4 - Unable to detect comment lines

Issue - State: closed - Opened by lishen almost 11 years ago - 1 comment
Labels: bug, enhancement

#3 - Cannot find gene annotation files

Issue - State: closed - Opened by lishen almost 11 years ago
Labels: bug, enhancement

#2 - Error message when no argument is supplied

Issue - State: closed - Opened by lishen almost 11 years ago
Labels: documentation

#1 - List required dependencies

Issue - State: closed - Opened by lishen almost 11 years ago
Labels: documentation