sgibb/MALDIquant issues and pull requests

#79 - can I skip some steps when analyzing centroided data

Issue - State: closed - Opened by Haoran-pumc 6 months ago - 2 comments

#78 - MALDI mass spec data format

Issue - State: closed - Opened by cathalgking 9 months ago - 1 comment

#77 - Python version planned?

Issue - State: closed - Opened by ajinkya-kulkarni over 1 year ago - 1 comment
Labels: wontfix

#76 - Change to new cran checks badge URL

Issue - State: closed - Opened by sckott almost 2 years ago - 2 comments

#75 - Negative SNR

Issue - State: closed - Opened by zdens over 2 years ago - 2 comments

#74 - Quality Control

Issue - State: closed - Opened by frankcorn over 2 years ago - 2 comments
Labels: question

#73 - Unable to plot MALDI-TOF proteomics data collected in reflectron mode

Issue - State: closed - Opened by w2niva over 2 years ago - 2 comments

#72 - Reduced memory requirement for filterPeaks; closes #71

Pull Request - State: closed - Opened by sgibb almost 3 years ago - 2 comments
Labels: enhancement

#71 - Reduced memory requirement for filterPeaks

Pull Request - State: closed - Opened by paoloinglese almost 3 years ago - 4 comments

#70 - using sparse matrix

Pull Request - State: open - Opened by paoloinglese almost 3 years ago - 8 comments
Labels: enhancement

#69 - Peak binning on reference peaks

Issue - State: closed - Opened by ndevln over 3 years ago - 2 comments
Labels: feature request

#68 - Extracting intensities from a file from a predifined m/z list

Issue - State: closed - Opened by mgorkaq about 4 years ago - 4 comments
Labels: question

#67 - Averaging warping functions - plate by plate effect

Issue - State: closed - Opened by SamGG about 4 years ago - 2 comments
Labels: question

#66 - Fix error with R-devel reported in issue #65

Pull Request - State: closed - Opened by lgatto over 4 years ago - 1 comment

#65 - Error in plot,AbstractMassObject,missing with R-devel

Issue - State: closed - Opened by lgatto over 4 years ago

#64 - Massive memory usage while using mergeMassPeaks and FilterPeaks

Issue - State: open - Opened by dsammour over 4 years ago - 6 comments

#63 - MALDIquant With WATERS DESI Data

Issue - State: closed - Opened by umara-Nissar over 4 years ago - 11 comments

#62 - On disk vector

Pull Request - State: open - Opened by dsammour over 5 years ago

#61 - MALDIquant::binpeaks() silently propagates values to empty MassPeaks objects

Issue - State: closed - Opened by chasemc over 5 years ago - 1 comment
Labels: bug

#60 - MassSpectrumOnDisk Functionality

Pull Request - State: open - Opened by dsammour over 5 years ago - 1 comment

#59 - warping - obtain number of matched peaks

Issue - State: closed - Opened by foellmelanie almost 6 years ago - 1 comment

#58 - raw MSI spectra as MassSpectra objects - size in memory

Issue - State: open - Opened by dsammour almost 6 years ago - 25 comments
Labels: feature request, help wanted

#57 - Error and question regarding alignSpectra function

Issue - State: closed - Opened by foellmelanie over 6 years ago - 7 comments
Labels: enhancement

#56 - binPeaks tolerance documentation

Issue - State: closed - Opened by chasemc over 6 years ago - 3 comments
Labels: enhancement

#55 - One more thought on the average smoothing

Issue - State: closed - Opened by SiggiSmara almost 7 years ago - 2 comments
Labels: question

#54 - Weighted moving average

Pull Request - State: closed - Opened by SiggiSmara almost 7 years ago - 3 comments

#53 - Add weighted average to the spectrum smoothing?

Issue - State: closed - Opened by SiggiSmara almost 7 years ago - 1 comment

#52 - Error in (function (classes, fdef, mtable) : unable to find an inherited method for function ‘transformIntensity’ for signature ‘"character"’

Issue - State: closed - Opened by ghost about 7 years ago - 9 comments
Labels: question

#51 - Avoid division by zero in `calibrateIntensity`

Issue - State: closed - Opened by sgibb about 9 years ago
Labels: bug

#50 - Rewrite description

Issue - State: closed - Opened by sgibb over 9 years ago
Labels: TODO

#49 - Update RforProteomics + ProtViz vignettes

Issue - State: closed - Opened by sgibb over 9 years ago
Labels: TODO

#48 - MSI vignette

Issue - State: closed - Opened by sgibb over 9 years ago - 1 comment
Labels: TODO

#47 - msi example in plotMsiSlice

Issue - State: closed - Opened by sgibb over 9 years ago
Labels: TODO

#46 - ProtGenerics

Issue - State: closed - Opened by lgatto over 9 years ago - 7 comments
Labels: question

#45 - parallel support

Issue - State: closed - Opened by sgibb over 9 years ago
Labels: enhancement

#44 - move tests

Issue - State: closed - Opened by sgibb almost 11 years ago
Labels: TODO