Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / sequana/sequana-wrappers issues and pull requests
#102 - clean CI
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#102 - clean CI
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#101 - Fixing CI
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#101 - Fixing CI
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#100 - Fixing CI
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#100 - Fixing CI
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#99 - Update CI
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#99 - Update CI
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#98 - Update CI
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#98 - Update CI
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#97 - Remove useless import
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#97 - Remove useless import
Pull Request -
State: closed - Opened by cokelaer about 1 year ago
#96 - falco recipe could avoid sequana usage
Issue -
State: open - Opened by cokelaer about 1 year ago
#96 - falco recipe could avoid sequana usage
Issue -
State: open - Opened by cokelaer about 1 year ago
#95 - refactor sequana coverage
Pull Request -
State: closed - Opened by cokelaer over 1 year ago
#95 - refactor sequana coverage
Pull Request -
State: closed - Opened by cokelaer over 1 year ago
#94 - add bamtools stats wrapper
Pull Request -
State: closed - Opened by cokelaer over 1 year ago
#94 - add bamtools stats wrapper
Pull Request -
State: closed - Opened by cokelaer over 1 year ago
#93 - Fixes CI
Pull Request -
State: closed - Opened by cokelaer over 1 year ago
#93 - Fixes CI
Pull Request -
State: closed - Opened by cokelaer over 1 year ago
#92 - README and update add container in README when possible
Issue -
State: open - Opened by cokelaer over 1 year ago
#92 - README and update add container in README when possible
Issue -
State: open - Opened by cokelaer over 1 year ago
#91 - add sequana_taxonomy wrapper
Pull Request -
State: closed - Opened by cokelaer over 1 year ago
#91 - add sequana_taxonomy wrapper
Pull Request -
State: closed - Opened by cokelaer over 1 year ago
#90 - rulegraph create dot file
Pull Request -
State: closed - Opened by ddesvillechabrol almost 2 years ago
#90 - rulegraph create dot file
Pull Request -
State: closed - Opened by ddesvillechabrol almost 2 years ago
#87 - move bamtools to samtools for indexing
Pull Request -
State: closed - Opened by cokelaer almost 2 years ago
#87 - move bamtools to samtools for indexing
Pull Request -
State: closed - Opened by cokelaer almost 2 years ago
#86 - mv bamtools to samtools for indexing
Pull Request -
State: closed - Opened by cokelaer almost 2 years ago
#86 - mv bamtools to samtools for indexing
Pull Request -
State: closed - Opened by cokelaer almost 2 years ago
#85 - Add rockhopper wrapper
Issue -
State: open - Opened by khourhin about 2 years ago
#85 - Add rockhopper wrapper
Issue -
State: open - Opened by khourhin about 2 years ago
#84 - use output prefix in digital norm
Pull Request -
State: closed - Opened by ddesvillechabrol about 2 years ago
#84 - use output prefix in digital norm
Pull Request -
State: closed - Opened by ddesvillechabrol about 2 years ago
#83 - fix ref alignment
Pull Request -
State: closed - Opened by ddesvillechabrol about 2 years ago
#83 - fix ref alignment
Pull Request -
State: closed - Opened by ddesvillechabrol about 2 years ago
#82 - add bioconvert wrapper with container link
Issue -
State: open - Opened by cokelaer about 2 years ago
#82 - add bioconvert wrapper with container link
Issue -
State: open - Opened by cokelaer about 2 years ago
#81 - ad options for build stage of SnpEff (add_locus_tag)
Pull Request -
State: closed - Opened by cokelaer about 2 years ago
#81 - ad options for build stage of SnpEff (add_locus_tag)
Pull Request -
State: closed - Opened by cokelaer about 2 years ago
#80 - add README in fastp wrapper
Issue -
State: closed - Opened by cokelaer about 2 years ago
- 1 comment
#80 - add README in fastp wrapper
Issue -
State: closed - Opened by cokelaer about 2 years ago
- 1 comment
#79 - add unicycler wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#79 - add unicycler wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#78 - Refacto blast for denovo/lora
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#78 - Refacto blast for denovo/lora
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#77 - roll back previous commit and pin sambamba for test.
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#77 - roll back previous commit and pin sambamba for test.
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#76 - Fixing sambamba output directory creation
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#76 - Fixing sambamba output directory creation
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#75 - Fix spades, prokka & quast
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#75 - Fix spades, prokka & quast
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#74 - set gbk as input
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#74 - set gbk as input
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#73 - sambamba tmpdir is optional
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#73 - sambamba tmpdir is optional
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#72 - add prokka wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#72 - add prokka wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#71 - add quast wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#71 - add quast wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#70 - add spades wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#70 - add spades wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#69 - Get rid of easydev
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#68 - add salmon index and align wrappers
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
Labels: New wrappers
#68 - add salmon index and align wrappers
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
Labels: New wrappers
#67 - add salmon
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
Labels: New wrappers
#67 - add salmon
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
Labels: New wrappers
#66 - add star wrappers
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
Labels: enhancement
#66 - add star wrappers
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
Labels: enhancement
#65 - add star_index and star_align wrappers
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#65 - add star_index and star_align wrappers
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#64 - add deeptools bamCoverage wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#63 - bamCoverage
Issue -
State: closed - Opened by cokelaer over 2 years ago
Labels: enhancement
#63 - bamCoverage
Issue -
State: closed - Opened by cokelaer over 2 years ago
Labels: enhancement
#62 - star_index and mapping
Issue -
State: closed - Opened by cokelaer over 2 years ago
Labels: New wrappers
#62 - star_index and mapping
Issue -
State: closed - Opened by cokelaer over 2 years ago
Labels: New wrappers
#61 - atropos wrapper
Issue -
State: open - Opened by cokelaer over 2 years ago
#61 - atropos wrapper
Issue -
State: open - Opened by cokelaer over 2 years ago
#60 - cutadapt wrapper
Issue -
State: open - Opened by cokelaer over 2 years ago
#60 - cutadapt wrapper
Issue -
State: open - Opened by cokelaer over 2 years ago
#59 - salmon_index/mapping
Issue -
State: closed - Opened by cokelaer over 2 years ago
#59 - salmon_index/mapping
Issue -
State: closed - Opened by cokelaer over 2 years ago
#58 - bamCoverage wrapper
Issue -
State: closed - Opened by cokelaer over 2 years ago
#58 - bamCoverage wrapper
Issue -
State: closed - Opened by cokelaer over 2 years ago
#57 - Fix fastqc wrapper to handle BAM files correctly
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
Labels: bug
#57 - Fix fastqc wrapper to handle BAM files correctly
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
Labels: bug
#56 - add medaka_consensus wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#56 - add medaka_consensus wrapper
Pull Request -
State: closed - Opened by ddesvillechabrol over 2 years ago
#55 - Allow polipolish to take several SAM files as input
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#55 - Allow polipolish to take several SAM files as input
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#54 - add polypolish
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#54 - add polypolish
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#53 - add polypolish wrapper
Issue -
State: closed - Opened by cokelaer over 2 years ago
Labels: New wrappers
#53 - add polypolish wrapper
Issue -
State: closed - Opened by cokelaer over 2 years ago
Labels: New wrappers
#52 - bug in trinity with memory allocation
Issue -
State: closed - Opened by cokelaer over 2 years ago
Labels: bug
#52 - bug in trinity with memory allocation
Issue -
State: closed - Opened by cokelaer over 2 years ago
Labels: bug
#51 - Fix ci
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#51 - Fix ci
Pull Request -
State: closed - Opened by cokelaer over 2 years ago
#50 - sort with samtools
Pull Request -
State: closed - Opened by ddesvillechabrol almost 3 years ago
#49 - Adding trinity_quantify (using kallisto)
Pull Request -
State: closed - Opened by khourhin almost 3 years ago
- 1 comment