Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / seqan/seqan3 issues and pull requests

#3290 - [INFRA] Fail CI if ctest finds no tests

Pull Request - State: closed - Opened by eseiler about 1 month ago - 2 comments

#3289 - [MISC] Add -Wnrvo warning

Pull Request - State: closed - Opened by eseiler about 1 month ago - 2 comments

#3288 - [WIP] Use CPM

Pull Request - State: open - Opened by eseiler about 1 month ago - 2 comments

#3280 - [CRON] API-Stability

Issue - State: closed - Opened by eseiler 4 months ago - 4 comments
Labels: Cron

#100 - add complement() and view::complement

Pull Request - State: closed - Opened by h-2 over 7 years ago - 1 comment

#99 - documentation of views

Issue - State: closed - Opened by h-2 over 7 years ago - 4 comments

#98 - Feature/sequence io

Pull Request - State: closed - Opened by temehi over 7 years ago - 1 comment

#97 - gaps module after clean-up

Issue - State: closed - Opened by marehr over 7 years ago

#96 - Feature/alphabet adaptations3

Pull Request - State: closed - Opened by h-2 over 7 years ago - 1 comment

#95 - Gap cleanup

Pull Request - State: closed - Opened by marehr over 7 years ago

#94 - [INTERNAL] rework documentation of union_composition

Pull Request - State: closed - Opened by marehr over 7 years ago - 14 comments

#93 - fix error with include inside namespace (aa27)

Pull Request - State: closed - Opened by joergi-w over 7 years ago - 2 comments
Labels: bug

#92 - Structure alphabets: dot-bracket, wuss, dssp

Pull Request - State: closed - Opened by joergi-w over 7 years ago - 2 comments
Labels: feature/proposal

#91 - Infrastructure/alphabet cleanup

Pull Request - State: closed - Opened by h-2 over 7 years ago - 2 comments

#90 - Issue #54 meta-headers

Pull Request - State: closed - Opened by kneubert over 7 years ago - 2 comments

#89 - Argument parser - export of file format (ctd) for KNIME engine

Issue - State: closed - Opened by smehringer over 7 years ago - 2 comments
Labels: feature/proposal

#88 - [FEATURE] The Argument Parser

Pull Request - State: closed - Opened by smehringer over 7 years ago - 15 comments
Labels: feature/proposal

#87 - cleanup test cases of union_composition

Pull Request - State: closed - Opened by marehr over 7 years ago

#86 - add noexcept to union_composition

Pull Request - State: closed - Opened by marehr over 7 years ago - 2 comments

#85 - noexcept version/macro for function that use assert, i.e. only throw in debug mode

Issue - State: closed - Opened by marehr over 7 years ago - 2 comments
Labels: feature/proposal

#84 - Create alphabet composition module #58

Pull Request - State: closed - Opened by marehr over 7 years ago - 1 comment
Labels: feature/proposal

#83 - Export code snippets into files that can be tested

Issue - State: closed - Opened by smehringer over 7 years ago - 4 comments

#82 - [DOC] document sequence file format concept

Pull Request - State: closed - Opened by joergi-w over 7 years ago - 4 comments

#81 - [FIX] include array when you actually use array :)

Pull Request - State: closed - Opened by h-2 over 7 years ago - 1 comment

#80 - Update submodules and add cereal2

Pull Request - State: closed - Opened by h-2 over 7 years ago

#79 - Update submodules and add cereal

Pull Request - State: closed - Opened by h-2 over 7 years ago - 1 comment

#78 - The new ConcatDirect StringSet

Pull Request - State: closed - Opened by h-2 over 7 years ago - 4 comments
Labels: feature/proposal

#77 - Feature/tokenization

Pull Request - State: closed - Opened by rrahn over 7 years ago - 2 comments
Labels: feature/proposal

#76 - Support concept for doxygen.

Issue - State: closed - Opened by xenigmax over 7 years ago - 3 comments

#75 - [FIX] assign_char and assign_rank for illumina18

Pull Request - State: closed - Opened by cpockrandt over 7 years ago - 2 comments
Labels: bug

#74 - Remove release mode and enable warnings

Pull Request - State: closed - Opened by cpockrandt over 7 years ago - 5 comments
Labels: bug

#73 - structure alphabets

Issue - State: closed - Opened by h-2 over 7 years ago - 2 comments
Labels: feature/proposal

#72 - wiki: document concepts as doxygen interfaces

Issue - State: closed - Opened by h-2 over 7 years ago - 3 comments
Labels: good first issue

#71 - [FEATURE,TEST] update of aminoacid submodule including tests

Pull Request - State: closed - Opened by sarahet over 7 years ago - 1 comment

#70 - union_composition clean-up: noexcept

Issue - State: closed - Opened by marehr over 7 years ago - 2 comments

#69 - union_composition clean-up: tests

Issue - State: closed - Opened by marehr over 7 years ago

#68 - union_composition clean-up: documentation

Issue - State: closed - Opened by marehr over 7 years ago - 3 comments

#67 - [INTERNAL] doxygen: remove <filepath> from \file

Pull Request - State: closed - Opened by marehr over 7 years ago

#65 - Fix included header name

Pull Request - State: closed - Opened by mariehoffmann over 7 years ago

#64 - Remove convert() function, add user defined conversion, update views

Pull Request - State: closed - Opened by h-2 over 7 years ago - 4 comments

#63 - don't force tests to be in release mode and activate warnings

Issue - State: closed - Opened by h-2 over 7 years ago - 1 comment
Labels: bug

#62 - figure out a good way of testing custom views

Issue - State: closed - Opened by h-2 over 7 years ago - 1 comment

#61 - Doxygen \file should be empty if it is in the same file

Issue - State: closed - Opened by marehr over 7 years ago - 7 comments

#60 - union_composition clean-up

Issue - State: closed - Opened by h-2 over 7 years ago - 1 comment

#59 - gaps module clean-up

Issue - State: closed - Opened by h-2 over 7 years ago - 4 comments

#58 - create alphabet/composition submodule

Issue - State: closed - Opened by h-2 over 7 years ago

#57 - Bring aminoacid submodule up to state

Issue - State: closed - Opened by h-2 over 7 years ago - 5 comments

#56 - [FEATURE] Initial commit of translation and translation_detail for nucl to aa t…

Pull Request - State: closed - Opened by sarahet over 7 years ago - 11 comments
Labels: feature/proposal

#55 - [FEATURE,TEST] fix down-conversion of nucl16; don't hardcode conversi…

Pull Request - State: closed - Opened by h-2 over 7 years ago - 4 comments

#54 - where to put the module and submodule meta-includes

Issue - State: closed - Opened by h-2 over 7 years ago - 9 comments

#53 - alphabet is not working for pod's

Issue - State: closed - Opened by marehr over 7 years ago - 1 comment
Labels: bug

#52 - conversion function, specializations and view::convert

Pull Request - State: closed - Opened by h-2 over 7 years ago - 1 comment
Labels: feature/proposal

#51 - Test/typed alphabet tests

Pull Request - State: closed - Opened by h-2 over 7 years ago - 2 comments

#50 - Feature/add range module

Pull Request - State: closed - Opened by h-2 over 7 years ago - 1 comment

#49 - [INTERNAL] simplify test cases

Pull Request - State: closed - Opened by marehr over 7 years ago

#48 - add adaptations submodule to alphabet module

Pull Request - State: closed - Opened by h-2 over 7 years ago - 7 comments

#47 - add documentation

Pull Request - State: closed - Opened by h-2 over 7 years ago - 6 comments

#46 - [INTERNAL] add testcases for min_viable_uint_t

Pull Request - State: closed - Opened by marehr over 7 years ago

#45 - Tidy up testcases

Pull Request - State: closed - Opened by marehr over 7 years ago

#44 - Major update to alphabet module, add RNA

Pull Request - State: closed - Opened by h-2 over 7 years ago - 2 comments

#43 - raise cpp version requirement to C++17 again

Issue - State: closed - Opened by h-2 over 7 years ago - 2 comments
Labels: good first issue

#42 - [Bug] __cplusplus flag for GCC7 supporting all needed features is 201500

Pull Request - State: closed - Opened by mariehoffmann over 7 years ago - 3 comments

#41 - [FEATURE] view::convert base implementation

Pull Request - State: closed - Opened by h-2 over 7 years ago - 3 comments

#40 - add alphabet meta header, clean-up

Pull Request - State: closed - Opened by h-2 over 7 years ago - 4 comments

#39 - Quality alphabet TODOs

Issue - State: closed - Opened by h-2 over 7 years ago - 5 comments
Labels: feature/proposal

#38 - Feature/alphabet composition

Pull Request - State: closed - Opened by h-2 over 7 years ago - 3 comments

#37 - [INTERNAL] add version header and platform header

Pull Request - State: closed - Opened by h-2 over 7 years ago

#36 - [FEATURE] Adds core and iterator conceps adapted from the ranges library

Pull Request - State: closed - Opened by rrahn over 7 years ago
Labels: feature/proposal

#35 - [FEATURE] Build union_alphabet lookup tables at compile time to guarantee constant operations

Pull Request - State: closed - Opened by marehr over 7 years ago - 11 comments
Labels: feature/proposal

#34 - Feature iterator

Pull Request - State: closed - Opened by mariehoffmann over 7 years ago - 15 comments

#33 - [FEATURE] travis: cache downloads and use ccache when available

Pull Request - State: closed - Opened by marehr over 7 years ago

#32 - Add proper file I/O Exceptions

Issue - State: closed - Opened by rrahn over 7 years ago - 1 comment
Labels: feature/proposal

#31 - [FIX,DOC] Some minor fixes and revising documentation

Pull Request - State: closed - Opened by rrahn over 7 years ago - 3 comments

#30 - [FEATURE] only build googetest (without mock)

Pull Request - State: closed - Opened by marehr over 7 years ago

#29 - [FEATURE] CI on travis with g++-7

Pull Request - State: closed - Opened by marehr over 7 years ago

#27 - Open issues container module

Issue - State: closed - Opened by h-2 over 7 years ago

#26 - [FIX] add doxygen docu to dna5 and dna5_container; adapt format to dna4

Pull Request - State: closed - Opened by eldariont over 7 years ago

#25 - [INTERNAL] File names and test names changed

Pull Request - State: closed - Opened by sarahet over 7 years ago

#24 - [FEATURE] union alphabet and gapped alphabet with tests

Pull Request - State: closed - Opened by eldariont over 7 years ago - 1 comment
Labels: feature/proposal

#23 - add sequence_file_out

Pull Request - State: closed - Opened by kneubert over 7 years ago - 1 comment
Labels: feature/proposal

#22 - Open issues with doxygen

Issue - State: closed - Opened by h-2 over 7 years ago - 2 comments

#21 - [INTERNAL,FIX] Fixes initial draft of sequence_file_in.

Pull Request - State: closed - Opened by smehringer over 7 years ago
Labels: bug

#20 - [FEATURE] Alignment class

Pull Request - State: closed - Opened by joergi-w over 7 years ago - 1 comment
Labels: feature/proposal

#19 - remove unnecessary stuff from CMakeLists.txt

Pull Request - State: closed - Opened by eldariont over 7 years ago

#18 - [FIX] move and improve gap alphabet

Pull Request - State: closed - Opened by eldariont over 7 years ago

#15 - Fixed initial draft

Pull Request - State: closed - Opened by temehi over 7 years ago

#14 - [TEST] Test for nucleotide 16

Pull Request - State: closed - Opened by sarahet over 7 years ago

#13 - [Feature] Aminoacid27 with Tests

Pull Request - State: closed - Opened by sarahet over 7 years ago

#12 - add rna4

Pull Request - State: closed - Opened by xp3i4 over 7 years ago - 4 comments

#11 - [INTERNAL] recursive concept check for variant

Pull Request - State: closed - Opened by smehringer over 7 years ago - 1 comment

#10 - [FEATURE] sequence file format concept

Pull Request - State: closed - Opened by joergi-w over 7 years ago

#9 - Added first draft of quality concept, illumina 1.8 implementation and test.

Pull Request - State: closed - Opened by mariehoffmann over 7 years ago - 2 comments

#8 - add dna5 and dna5_sequence types

Pull Request - State: closed - Opened by eldariont over 7 years ago - 1 comment

#7 - Initial test cmakelists

Pull Request - State: closed - Opened by mariehoffmann over 7 years ago

#6 - [FEATURE] Nucleotide16

Pull Request - State: closed - Opened by sarahet over 7 years ago

#5 - [FIX] char_to_value missing A

Pull Request - State: closed - Opened by sarahet over 7 years ago
Labels: bug