Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / seqan/product_backlog issues and pull requests

#407 - translation TODOs

Issue - State: closed - Opened by h-2 about 7 years ago - 13 comments

#383 - All views shall have explicit constructors

Issue - State: closed - Opened by smehringer over 5 years ago - 4 comments

#363 - make parse_cigar public

Issue - State: closed - Opened by eldariont about 5 years ago - 4 comments

#140 - [follow-up#1094] Test that `seqan3-config.cmake` works with cmake 3.4.

Issue - State: closed - Opened by marehr over 5 years ago - 4 comments

#139 - Revisit Setup guide

Issue - State: closed - Opened by eseiler over 5 years ago - 1 comment

#137 - Provide .gitpod.yml to try out seqan3 in an online editor

Issue - State: closed - Opened by marehr almost 5 years ago - 6 comments

#136 - Remove #pragma GCC diagnostic ignored "-Wdeprecated-declarations"

Issue - State: closed - Opened by marehr over 4 years ago - 4 comments

#136 - Remove #pragma GCC diagnostic ignored "-Wdeprecated-declarations"

Issue - State: closed - Opened by marehr over 4 years ago - 4 comments

#135 - Remove dependencies of seqan3 in `seqan3/std/*` headers

Issue - State: closed - Opened by marehr over 4 years ago - 1 comment

#135 - Remove dependencies of seqan3 in `seqan3/std/*` headers

Issue - State: closed - Opened by marehr over 4 years ago - 1 comment

#134 - Move C++20 things into `std` namespace

Issue - State: closed - Opened by marehr over 4 years ago - 3 comments
Labels: good first issue

#132 - Replace the ranges::views::zip with our own implementation.

Issue - State: closed - Opened by rrahn almost 5 years ago - 2 comments

#131 - Design of algorithm configuration

Issue - State: closed - Opened by rrahn almost 5 years ago - 1 comment

#130 - I/O Performance

Issue - State: closed - Opened by rrahn almost 5 years ago

#129 - Improve FastQ I/O

Issue - State: closed - Opened by rrahn almost 5 years ago - 1 comment

#127 - clang-git support

Issue - State: closed - Opened by marehr almost 5 years ago - 1 comment
Labels: Epic

#88 - cxx20: return-type-requirement is not a type-constraint

Issue - State: closed - Opened by marehr over 4 years ago
Labels: ready to tackle

#88 - cxx20: return-type-requirement is not a type-constraint

Issue - State: closed - Opened by marehr over 4 years ago
Labels: ready to tackle

#87 - Creating the seqan Cookbook

Issue - State: closed - Opened by wvdtoorn over 4 years ago

#87 - Creating the seqan Cookbook

Issue - State: closed - Opened by wvdtoorn over 4 years ago

#86 - Rename `seqan3::dimension_v`, ...

Issue - State: closed - Opened by marehr over 4 years ago
Labels: ready to tackle

#86 - Rename `seqan3::dimension_v`, ...

Issue - State: closed - Opened by marehr over 4 years ago
Labels: ready to tackle

#85 - Benchmark Minimiser_hash

Issue - State: closed - Opened by MitraDarja over 4 years ago
Labels: ready to tackle, needs refinement

#85 - Benchmark Minimiser_hash

Issue - State: closed - Opened by MitraDarja over 4 years ago
Labels: ready to tackle, needs refinement

#84 - Minimiser View works with reverse k-mers

Issue - State: closed - Opened by MitraDarja over 4 years ago
Labels: ready to tackle

#84 - Minimiser View works with reverse k-mers

Issue - State: closed - Opened by MitraDarja over 4 years ago
Labels: ready to tackle

#83 - Implement EXPECT_RANGE_EQ

Issue - State: closed - Opened by marehr over 4 years ago

#82 - [Alignment] Missing coverage in edit distance unbanded

Issue - State: open - Opened by rrahn over 4 years ago
Labels: needs refinement

#82 - [Alignment] Missing coverage in edit distance unbanded

Issue - State: open - Opened by rrahn over 4 years ago
Labels: needs refinement

#81 - [doc] value parameter in arg-parser is in-out, not out

Issue - State: closed - Opened by h-2 over 4 years ago - 3 comments
Labels: bug, good first issue

#81 - [doc] value parameter in arg-parser is in-out, not out

Issue - State: closed - Opened by h-2 over 4 years ago - 3 comments
Labels: bug, good first issue

#80 - [Alignment] Design proposal for executors in alignment and search

Issue - State: open - Opened by marehr over 4 years ago
Labels: needs refinement

#80 - [Alignment] Design proposal for executors in alignment and search

Issue - State: open - Opened by marehr over 4 years ago
Labels: needs refinement

#79 - search configuration hit configuration part 2

Issue - State: closed - Opened by rrahn over 4 years ago - 1 comment
Labels: ready to tackle

#79 - search configuration hit configuration part 2

Issue - State: closed - Opened by rrahn over 4 years ago - 1 comment
Labels: ready to tackle

#78 - Concurrent bulk_contains for interleaved_bloom_filter

Issue - State: closed - Opened by eseiler over 4 years ago - 6 comments
Labels: needs refinement

#78 - Concurrent bulk_contains for interleaved_bloom_filter

Issue - State: closed - Opened by eseiler over 4 years ago - 6 comments
Labels: needs refinement

#77 - get_int for interleaved_bloom_filter

Issue - State: closed - Opened by eseiler over 4 years ago - 1 comment
Labels: ready to tackle

#77 - get_int for interleaved_bloom_filter

Issue - State: closed - Opened by eseiler over 4 years ago - 1 comment
Labels: ready to tackle

#76 - Underscores in test and test suite names

Issue - State: closed - Opened by joergi-w over 4 years ago - 1 comment

#76 - Underscores in test and test suite names

Issue - State: closed - Opened by joergi-w over 4 years ago - 1 comment

#75 - alingment improvement refactorisation - banded alignment

Issue - State: closed - Opened by rrahn over 4 years ago - 1 comment
Labels: ready to tackle

#75 - alingment improvement refactorisation - banded alignment

Issue - State: closed - Opened by rrahn over 4 years ago - 1 comment
Labels: ready to tackle

#73 - alignment improvement refactorisation - compute end position

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#73 - alignment improvement refactorisation - compute end position

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#72 - alignment improvement refactorisation - compute vectorised global alignment score

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#72 - alignment improvement refactorisation - compute vectorised global alignment score

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#71 - alignment improvement refactorisation - free end gap initialisation

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#71 - alignment improvement refactorisation - free end gap initialisation

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#70 - alignment improvement refactorisation - new affine gap policy and score matrix

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#70 - alignment improvement refactorisation - new affine gap policy and score matrix

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#69 - [Search] sdsl index construction algorithm

Issue - State: open - Opened by rrahn over 4 years ago
Labels: needs refinement

#69 - [Search] sdsl index construction algorithm

Issue - State: open - Opened by rrahn over 4 years ago
Labels: needs refinement

#68 - search configuration parallel

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#68 - search configuration parallel

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#67 - search configuration output

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#67 - search configuration output

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#66 - search configuration max error

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#66 - search configuration max error

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#65 - search configuration hit part 1

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#65 - search configuration hit part 1

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#64 - Search Configurations

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: Epic, release note

#64 - Search Configurations

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: Epic, release note

#63 - Get `seqan3::debug_stream` straight once and for all.

Issue - State: closed - Opened by marehr over 4 years ago - 2 comments
Labels: Epic, needs refinement

#63 - Get `seqan3::debug_stream` straight once and for all.

Issue - State: closed - Opened by marehr over 4 years ago - 2 comments
Labels: Epic, needs refinement

#62 - [Alignment] unify matrix design for edit and generic alignment algorithm

Issue - State: open - Opened by marehr over 4 years ago
Labels: Epic

#62 - [Alignment] unify matrix design for edit and generic alignment algorithm

Issue - State: open - Opened by marehr over 4 years ago
Labels: Epic

#61 - gcc-10 -std=c++2a support

Issue - State: closed - Opened by marehr over 4 years ago - 4 comments
Labels: Epic, release note

#61 - gcc-10 -std=c++2a support

Issue - State: closed - Opened by marehr over 4 years ago - 4 comments
Labels: Epic, release note

#60 - Concepts for sequence and alignment

Issue - State: closed - Opened by marehr over 4 years ago - 3 comments
Labels: needs refinement

#60 - Concepts for sequence and alignment

Issue - State: closed - Opened by marehr over 4 years ago - 3 comments
Labels: needs refinement

#59 - [Range] Improve minimiser computation

Issue - State: closed - Opened by smehringer over 4 years ago
Labels: ready to tackle

#59 - [Range] Improve minimiser computation

Issue - State: closed - Opened by smehringer over 4 years ago
Labels: ready to tackle

#58 - Add separate global alignment algorithm with improved performance

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#58 - Add separate global alignment algorithm with improved performance

Issue - State: closed - Opened by rrahn over 4 years ago
Labels: ready to tackle

#57 - [Alignment] Add parallelisation support for the alignment module

Issue - State: open - Opened by rrahn over 5 years ago
Labels: Epic

#56 - [Alignment] Alignment Performance Improvement

Issue - State: open - Opened by rrahn over 4 years ago
Labels: Epic

#56 - [Alignment] Alignment Performance Improvement

Issue - State: open - Opened by rrahn over 4 years ago
Labels: Epic

#55 - Alignment Configuration and Interface

Issue - State: closed - Opened by rrahn over 4 years ago - 2 comments
Labels: Epic

#55 - Alignment Configuration and Interface

Issue - State: closed - Opened by rrahn over 4 years ago - 2 comments
Labels: Epic

#54 - [Alignment] Add basic vectorisation support for the dna global affine alignment

Issue - State: open - Opened by rrahn over 4 years ago
Labels: Epic

#54 - [Alignment] Add basic vectorisation support for the dna global affine alignment

Issue - State: open - Opened by rrahn over 4 years ago
Labels: Epic

#53 - Requires clauses need parenthesis for non-primary expressions

Issue - State: closed - Opened by marehr over 4 years ago - 2 comments

#53 - Requires clauses need parenthesis for non-primary expressions

Issue - State: closed - Opened by marehr over 4 years ago - 2 comments

#52 - Factory-Pattern in Algorithms

Issue - State: closed - Opened by marehr over 4 years ago - 1 comment

#52 - Factory-Pattern in Algorithms

Issue - State: closed - Opened by marehr over 4 years ago - 1 comment

#51 - Remove "Associated Types" from views

Issue - State: closed - Opened by marehr over 4 years ago - 3 comments

#51 - Remove "Associated Types" from views

Issue - State: closed - Opened by marehr over 4 years ago - 3 comments

#50 - Allow to overwrite existing output files.

Issue - State: closed - Opened by joergi-w over 4 years ago - 2 comments

#50 - Allow to overwrite existing output files.

Issue - State: closed - Opened by joergi-w over 4 years ago - 2 comments

#49 - C++20 "standard" conform

Issue - State: closed - Opened by marehr over 4 years ago - 1 comment
Labels: Epic, release note

#49 - C++20 "standard" conform

Issue - State: closed - Opened by marehr over 4 years ago - 1 comment
Labels: Epic, release note

#48 - Rename enable_safe_range to enable_borrowed_range.

Issue - State: closed - Opened by marehr over 4 years ago - 1 comment
Labels: ready to tackle

#48 - Rename enable_safe_range to enable_borrowed_range.

Issue - State: closed - Opened by marehr over 4 years ago - 1 comment
Labels: ready to tackle