Ecosyste.ms: Issues

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GitHub / seidels/typewriter_analysis issues and pull requests

#18 - Preliminary gastruloid with varying growth rates

Issue - State: open - Opened by seidels 7 months ago

#17 - Gastruloid - cell filtering & alignments

Issue - State: open - Opened by seidels 8 months ago

#16 - Fixed tree analyses

Issue - State: closed - Opened by seidels 8 months ago

#15 - Run analysis where all barcodes have just 2 sites

Issue - State: closed - Opened by seidels 9 months ago

#14 - Extend SciPhy for site specific rates

Issue - State: open - Opened by seidels 9 months ago

#13 - Cell culture analysis | Estimate cell trajectories

Issue - State: closed - Opened by seidels 10 months ago

#12 - Validations simulating 1 tree and alignment per data point

Issue - State: closed - Opened by seidels 10 months ago

#11 - Preliminary gastruloid with multitype model

Issue - State: closed - Opened by seidels about 1 year ago

#10 - Tree simulations (for edit outcomes through time)

Issue - State: closed - Opened by azwaans over 1 year ago - 1 comment

#9 - Dataset exploration preliminary gastruloid

Issue - State: closed - Opened by seidels over 1 year ago

#8 - Conservative analysis on preliminary gastruloid data

Issue - State: closed - Opened by seidels over 1 year ago

#7 - Full validation

Issue - State: closed - Opened by seidels over 1 year ago

#6 - Does threading cause wrong clock rate estimates?

Issue - State: closed - Opened by seidels over 1 year ago - 1 comment

#6 - Does threading cause wrong clock rate estimates?

Issue - State: closed - Opened by seidels over 1 year ago - 1 comment

#5 - Analysis of cell culture data!!

Issue - State: closed - Opened by seidels almost 2 years ago

#4 - Well-calibrated analysis given fixed tree

Issue - State: closed - Opened by seidels almost 2 years ago - 2 comments

#4 - Well-calibrated analysis given fixed tree

Issue - State: closed - Opened by seidels almost 2 years ago - 2 comments

#3 - Simulation

Issue - State: closed - Opened by seidels about 2 years ago

#3 - Simulation

Issue - State: closed - Opened by seidels about 2 years ago

#2 - presentation friday

Issue - State: closed - Opened by seidels about 2 years ago - 1 comment

#2 - presentation friday

Issue - State: closed - Opened by seidels about 2 years ago - 1 comment

#1 - Explore editing outcomes

Issue - State: closed - Opened by seidels over 2 years ago

#1 - Explore editing outcomes

Issue - State: closed - Opened by seidels over 2 years ago