Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / seandavi/sradb issues and pull requests
#38 - Data is not fetched.
Issue -
State: open - Opened by Saeedjaanz over 1 year ago
- 1 comment
#37 - No URLs working, I could not download the metadata database
Issue -
State: open - Opened by Majid-Soheili over 2 years ago
- 5 comments
#36 - [Question] It seems that the SRAmetadb.sqlite file does not contain recent data
Issue -
State: open - Opened by kojix2 over 3 years ago
#36 - [Question] It seems that the SRAmetadb.sqlite file does not contain recent data
Issue -
State: open - Opened by kojix2 over 3 years ago
#35 - Possible empty tables in the current SQLite file
Issue -
State: open - Opened by chappers2 over 4 years ago
#35 - Possible empty tables in the current SQLite file
Issue -
State: open - Opened by chappers2 over 4 years ago
#34 - Session Stop (Error: Server aborted session: No such file or directory)
Issue -
State: open - Opened by bweiler89 over 4 years ago
#34 - Session Stop (Error: Server aborted session: No such file or directory)
Issue -
State: open - Opened by bweiler89 over 4 years ago
#33 - SRAdb not working(Error in if (is.na)
Issue -
State: open - Opened by avrajit over 4 years ago
#33 - SRAdb not working(Error in if (is.na)
Issue -
State: open - Opened by avrajit over 4 years ago
#32 - SRAdb not available for R version 4.0.1
Issue -
State: open - Opened by apc1992 over 4 years ago
- 1 comment
#32 - SRAdb not available for R version 4.0.1
Issue -
State: open - Opened by apc1992 over 4 years ago
- 1 comment
#31 - sqlite is outdates and is different between amazon and backup URL
Issue -
State: open - Opened by antonkulaga over 4 years ago
- 1 comment
#31 - sqlite is outdates and is different between amazon and backup URL
Issue -
State: open - Opened by antonkulaga over 4 years ago
- 1 comment
#30 - issue listSRAfile
Issue -
State: open - Opened by AminChoukrallah over 4 years ago
#29 - pathogen host data
Issue -
State: closed - Opened by noahaus almost 5 years ago
- 6 comments
#29 - pathogen host data
Issue -
State: closed - Opened by noahaus almost 5 years ago
- 6 comments
#28 - getSRAdbFile Problem
Issue -
State: open - Opened by GanQiao1990 about 5 years ago
- 2 comments
#27 - Error in gregexpr("\\s", file_date1, perl = TRUE)[[1]] : subscript out of bounds
Issue -
State: open - Opened by lwaldron about 5 years ago
#26 - Paired end fastq FTP incorrect
Issue -
State: open - Opened by OgnjenMilicevic over 5 years ago
#26 - Paired end fastq FTP incorrect
Issue -
State: open - Opened by OgnjenMilicevic over 5 years ago
#25 - getSRAfile: argument is of length zero
Issue -
State: closed - Opened by Npbs8691 over 5 years ago
- 5 comments
#24 - SRADb does not seems up to date
Issue -
State: open - Opened by dktanwar over 5 years ago
#24 - SRADb does not seems up to date
Issue -
State: open - Opened by dktanwar over 5 years ago
#23 - listSRAfile() fails for SRX accessions
Issue -
State: open - Opened by RoganGrant almost 6 years ago
#22 - Update Frequency
Issue -
State: closed - Opened by saketkc almost 6 years ago
- 1 comment
#21 - getSRA() did not return all available study (SRP*/ERP*/DRP*) IDs
Issue -
State: open - Opened by parnika91 almost 6 years ago
- 1 comment
#20 - Missing data
Issue -
State: closed - Opened by ndaniel almost 6 years ago
- 1 comment
#19 - Is it possible to generate the sqlite DB from scratch?
Issue -
State: open - Opened by audy about 6 years ago
- 4 comments
#19 - Is it possible to generate the sqlite DB from scratch?
Issue -
State: open - Opened by audy about 6 years ago
- 4 comments
#18 - SRAdbFile does not exist
Issue -
State: closed - Opened by iprada over 6 years ago
- 1 comment
#18 - SRAdbFile does not exist
Issue -
State: closed - Opened by iprada over 6 years ago
- 1 comment
#17 - Missing metadata
Issue -
State: closed - Opened by wwood over 6 years ago
- 5 comments
#17 - Missing metadata
Issue -
State: closed - Opened by wwood over 6 years ago
- 5 comments
#16 - getSRAfile can't open URL to download
Issue -
State: closed - Opened by minwang90 almost 7 years ago
- 3 comments
#16 - getSRAfile can't open URL to download
Issue -
State: closed - Opened by minwang90 almost 7 years ago
- 3 comments
#15 - getSRAfile skip a file before completing downloading
Issue -
State: closed - Opened by xinl22 about 7 years ago
- 11 comments
#15 - getSRAfile skip a file before completing downloading
Issue -
State: closed - Opened by xinl22 about 7 years ago
- 11 comments
#14 - Swap retired `ByExp` paths to supported `ByRun`paths
Pull Request -
State: closed - Opened by pkimes about 7 years ago
- 1 comment
#13 - getSRAfile: cannot open URL
Issue -
State: closed - Opened by arnaudceol about 7 years ago
#12 - getFASTQfile fails - no such table: sra
Issue -
State: closed - Opened by ShixiangWang about 7 years ago
- 4 comments
#11 - No URLs working
Issue -
State: closed - Opened by saketkc over 7 years ago
- 26 comments
#10 - getSRAdbFile() error, cannot download file
Issue -
State: closed - Opened by jakeyeung over 7 years ago
- 17 comments
#9 - fastq table damaged -> fastq download broken
Issue -
State: open - Opened by ringprince almost 8 years ago
- 1 comment
#8 - Paired fastq file download error
Issue -
State: open - Opened by nsarode over 8 years ago
#7 - getSRAinfo() produces access denied error
Issue -
State: open - Opened by eavincent over 8 years ago
#6 - getFASTQinfo fails - no such table: fastq
Issue -
State: closed - Opened by bkamapantula almost 9 years ago
- 4 comments
#5 - Switch to httr for downloads
Issue -
State: closed - Opened by seandavi almost 9 years ago
- 2 comments
Labels: bug
#4 - Empty supplementary fields
Issue -
State: closed - Opened by seandavi almost 10 years ago
- 1 comment
Labels: bug
#3 - install_github("seandavi/SRAdb")
Issue -
State: closed - Opened by SharifiZarchi about 10 years ago
- 1 comment
#2 - getSRA, sqliteTableFields not found
Issue -
State: closed - Opened by SharifiZarchi about 10 years ago
#1 - Deal with rsqlite changes
Issue -
State: closed - Opened by seandavi over 10 years ago
Labels: enhancement