Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / seandavi/awesome-single-cell issues and pull requests

#154 - Update README.md

Pull Request - State: closed - Opened by yeroslaviz over 5 years ago - 1 comment

#153 - WOT

Issue - State: closed - Opened by yeroslaviz over 5 years ago

#100 - Add ChromVAR

Pull Request - State: closed - Opened by ttriche over 6 years ago

#99 - ChromVAR

Issue - State: closed - Opened by ttriche over 6 years ago - 1 comment

#98 - Error in file(file, "rt") : cannot open the connection

Issue - State: closed - Opened by shawnql08 over 6 years ago - 3 comments

#97 - Add Granatum publication link

Pull Request - State: closed - Opened by tkwolf over 6 years ago - 2 comments

#96 - trendsceek & SpatialIDE are added!

Pull Request - State: closed - Opened by rintukutum over 6 years ago

#95 - Added CellView

Pull Request - State: closed - Opened by wflynny over 6 years ago - 2 comments

#94 - Adding UNCURL

Pull Request - State: closed - Opened by mukhes3 over 6 years ago - 1 comment

#93 - updated html links!

Pull Request - State: closed - Opened by rintukutum over 6 years ago

#92 - added iSEE

Pull Request - State: closed - Opened by federicomarini over 6 years ago - 2 comments

#91 - Add SCIPhi

Pull Request - State: closed - Opened by lazappi over 6 years ago - 1 comment

#90 - added rMATS

Pull Request - State: closed - Opened by HussainAther over 6 years ago - 1 comment

#89 - DensityPath

Pull Request - State: closed - Opened by rintukutum over 6 years ago

#88 - added charlotte's paper (10.1038/nmeth.4612) under method comparisons

Pull Request - State: closed - Opened by markrobinsonuzh over 6 years ago - 1 comment

#87 - scImpute | doi updated, nature comm

Pull Request - State: closed - Opened by rintukutum over 6 years ago

#86 - SWNE | Similarity Weighted Nonnegative Embedding

Pull Request - State: closed - Opened by rintukutum over 6 years ago - 2 comments

#84 - MERLoT | Reconstructing complex lineage trees

Pull Request - State: closed - Opened by rintukutum over 6 years ago - 1 comment

#83 - added DECODE link to biorxiv | mit link was not working

Pull Request - State: closed - Opened by rintukutum over 6 years ago

#82 - adding sasc

Pull Request - State: closed - Opened by drkeoni over 6 years ago - 1 comment

#81 - Added inferCNV tool to the list

Pull Request - State: closed - Opened by drkeoni over 6 years ago

#80 - change scanpy language to python for consistency

Pull Request - State: closed - Opened by ckmah over 6 years ago - 1 comment

#79 - Suggest PyGMNormalize

Pull Request - State: closed - Opened by VPetukhov over 6 years ago - 1 comment

#78 - Suggest dropEst pipeline

Pull Request - State: closed - Opened by VPetukhov over 6 years ago - 1 comment

#77 - Update README.md

Pull Request - State: closed - Opened by AlessandraDM over 6 years ago - 1 comment

#76 - Renamed methylation, added new section

Pull Request - State: closed - Opened by drkeoni almost 7 years ago - 1 comment

#75 - adding separate section for ATAC-seq / combining methods?

Issue - State: closed - Opened by drkeoni almost 7 years ago - 4 comments

#74 - added aneufinder to README

Pull Request - State: closed - Opened by drkeoni almost 7 years ago - 1 comment

#73 - add dropsim

Pull Request - State: closed - Opened by daniel-wells almost 7 years ago - 1 comment

#72 - Add singlet to list of packages

Pull Request - State: closed - Opened by iosonofabio almost 7 years ago - 1 comment

#71 - P.R. a comperative study by Jaakkola et.al.

Pull Request - State: closed - Opened by anilbey almost 7 years ago - 1 comment

#70 - Add pcaReduce: hierarchical clustering of single cell transcriptional profiles

Pull Request - State: closed - Opened by anilbey almost 7 years ago - 1 comment

#69 - update url of Seurat tutorials. New Seurat version 2.0 available

Pull Request - State: closed - Opened by ssayols about 7 years ago - 1 comment

#68 - Update README.md

Pull Request - State: closed - Opened by AlessandraDM about 7 years ago - 1 comment

#67 - dropClust added

Pull Request - State: closed - Opened by debsin about 7 years ago - 1 comment

#66 - SCPortalen added

Pull Request - State: closed - Opened by alorchhota about 7 years ago - 2 comments

#65 - added article link for zUMIs

Pull Request - State: closed - Opened by rintukutum about 7 years ago - 1 comment

#64 - Add NetworkInference

Pull Request - State: closed - Opened by Tchanders about 7 years ago - 1 comment

#63 - added SCINIC | single-cell regulatory network inference and clustering

Pull Request - State: closed - Opened by rintukutum about 7 years ago - 1 comment

#62 - Updated affiliation + webpage

Pull Request - State: closed - Opened by catavallejos about 7 years ago - 2 comments

#61 - nice review on single cell multi-omics!

Pull Request - State: closed - Opened by rintukutum about 7 years ago - 2 comments

#60 - scvis | capture and visualize the low-dimensional structures in singl…

Pull Request - State: closed - Opened by rintukutum about 7 years ago

#59 - added BatchEffectRemoval

Pull Request - State: closed - Opened by rintukutum about 7 years ago

#58 - add scTDA

Pull Request - State: closed - Opened by leezx about 7 years ago - 1 comment

#57 - Update README.md

Pull Request - State: closed - Opened by jw156605 about 7 years ago - 1 comment

#56 - added scmap

Pull Request - State: closed - Opened by rintukutum over 7 years ago

#55 - Replace link to my table with scRNA-tools.org

Pull Request - State: closed - Opened by lazappi over 7 years ago

#54 - Added programming language for ICGS.

Pull Request - State: closed - Opened by nsalomonis over 7 years ago - 1 comment

#53 - ICGS description added

Pull Request - State: closed - Opened by nsalomonis over 7 years ago - 1 comment

#52 - Create CODE_OF_CONDUCT.md

Pull Request - State: closed - Opened by seandavi over 7 years ago

#51 - Added mfa and phenopath

Pull Request - State: closed - Opened by kieranrcampbell over 7 years ago

#50 - Update Single Cell Portal Description.

Pull Request - State: closed - Opened by TimothyTickle over 7 years ago

#49 - Update README.md

Pull Request - State: closed - Opened by bvieth over 7 years ago - 1 comment

#48 - Update README.md

Pull Request - State: closed - Opened by sdparekh over 7 years ago - 2 comments

#47 - Add entry for DeLorean pseudotime estimation.

Pull Request - State: closed - Opened by JohnReid over 7 years ago - 1 comment

#46 - Correct lazappi's link

Pull Request - State: closed - Opened by daniel-wells over 7 years ago - 1 comment

#45 - Add Barbara Treutlein and fix paren on Dana Pe'er

Pull Request - State: closed - Opened by olgabot over 7 years ago

#44 - Add CellCNN and GPfates

Pull Request - State: closed - Opened by olgabot over 7 years ago

#43 - Add scImpute

Issue - State: closed - Opened by seandavi over 7 years ago

#42 - added Scanpy

Pull Request - State: closed - Opened by falexwolf over 7 years ago - 2 comments

#41 - add scRNA.seq.datasets and scmap

Pull Request - State: closed - Opened by wikiselev over 7 years ago - 1 comment

#40 - Garmire group (Cancer Center, Hawaii) works (SSrGE + Granatum + website of GarmireGroup)

Pull Request - State: closed - Opened by opoirion over 7 years ago - 1 comment

#39 - WIP: Add badges/shields

Pull Request - State: closed - Opened by olgabot over 7 years ago - 12 comments

#38 - Added my pipeline

Pull Request - State: closed - Opened by Hoohm over 7 years ago

#37 - Update README.md

Pull Request - State: closed - Opened by talshay over 7 years ago

#36 - wishbone added!

Pull Request - State: closed - Opened by rintukutum over 7 years ago - 2 comments

#35 - Update README.md

Pull Request - State: closed - Opened by VincentGardeux over 7 years ago

#34 - Update README.md

Pull Request - State: closed - Opened by UrszulaCzerwinska almost 8 years ago

#33 - D3E added to section Web portals and apps

Pull Request - State: closed - Opened by rintukutum almost 8 years ago

#32 - Review articles and source for additional methods

Pull Request - State: closed - Opened by agitter almost 8 years ago - 3 comments

#31 - Add scRNASeqDB database

Pull Request - State: closed - Opened by agitter almost 8 years ago - 1 comment

#30 - SiFiT > moved to other applications

Pull Request - State: closed - Opened by rintukutum almost 8 years ago

#29 - SiFit | A Method for Inferring Tumor Trees

Pull Request - State: closed - Opened by rintukutum almost 8 years ago - 1 comment

#28 - Adding Ginkgo to list of web apps + fix minor typos

Pull Request - State: closed - Opened by robertaboukhalil almost 8 years ago - 1 comment

#27 - MIMOSCA [Pertub-seq] added

Pull Request - State: closed - Opened by rintukutum almost 8 years ago

#26 - Update README.md

Pull Request - State: closed - Opened by Puriney almost 8 years ago

#25 - Added new entry under "People->Male".

Pull Request - State: closed - Opened by arisf almost 8 years ago - 1 comment

#24 - Add ZIFA (Python) for dimension reduction.

Pull Request - State: closed - Opened by dakota-hawkins about 8 years ago - 1 comment

#23 - Add Rhonda Bacher to list of people

Pull Request - State: closed - Opened by PeteHaitch about 8 years ago - 1 comment

#22 - add SAKE, ASAP, M3Drop, PoissonUMIs and Martin Hemberg

Pull Request - State: closed - Opened by wikiselev about 8 years ago - 1 comment

#21 - Add SCIMITAR

Pull Request - State: closed - Opened by MikeDMorgan about 8 years ago

#20 - add tutorial from FoG SC workshop

Pull Request - State: closed - Opened by kdkorthauer about 8 years ago

#19 - Differential test added to BASiCS description

Pull Request - State: closed - Opened by catavallejos about 8 years ago - 1 comment

#18 - Adding TRAPeS

Pull Request - State: closed - Opened by deto about 8 years ago

#17 - Add FastProject to list

Pull Request - State: closed - Opened by deto about 8 years ago - 1 comment

#16 - Add link to Single-cell software table.

Pull Request - State: closed - Opened by lazappi about 8 years ago - 1 comment

#14 - BackSPIN algorithm added

Pull Request - State: closed - Opened by gioelelm about 8 years ago - 1 comment

#13 - add scDD R package to RNAseq software list

Pull Request - State: closed - Opened by kdkorthauer about 8 years ago - 1 comment

#12 - Add outrigger and fix order for CSHL analysis

Pull Request - State: closed - Opened by olgabot about 8 years ago

#11 - Typo

Pull Request - State: closed - Opened by PeteHaitch about 8 years ago

#10 - Start list of people working single-cell genomics

Pull Request - State: closed - Opened by PeteHaitch about 8 years ago - 1 comment

#9 - Adding list of people (e.g., for talk invitations)

Issue - State: closed - Opened by PeteHaitch about 8 years ago - 1 comment

#8 - Add tools from Yeo lab + CSHL course materials

Pull Request - State: closed - Opened by olgabot about 8 years ago - 2 comments

#7 - Update README.md

Pull Request - State: closed - Opened by stephaniehicks over 8 years ago - 1 comment

#6 - Add Ouija and switchde

Pull Request - State: closed - Opened by kieranrcampbell over 8 years ago - 1 comment

#5 - Update README.md

Pull Request - State: closed - Opened by david-duverle over 8 years ago

#4 - added two tools from the Teichmann Group

Pull Request - State: closed - Opened by boombard over 8 years ago - 1 comment

#3 - Update README.md

Pull Request - State: closed - Opened by JEFworks over 8 years ago - 1 comment