seaflow-uw/popcycle issues and pull requests

#65 - `cmap_convert()` uses a deprecated `readr::write_csv` argument

Issue - State: open - Opened by ctberthiaume about 1 year ago

#64 - Best way to install package?

Issue - State: closed - Opened by sangwon-hyun almost 2 years ago - 2 comments

#63 - Make plan start_date more permissive

Issue - State: open - Opened by ctberthiaume over 2 years ago

#62 - Fix gating ID spacing in error message in `save_gating_plan`

Issue - State: closed - Opened by ctberthiaume over 2 years ago

#61 - in `create_PSD`, add refractive indices for beads and unknow autmatically

Issue - State: closed - Opened by ctberthiaume over 2 years ago - 1 comment

#60 - Can't create OPP output directory when filtering

Issue - State: closed - Opened by ctberthiaume almost 3 years ago - 1 comment

#59 - Add tests for outlier filtering in get.* functions

Issue - State: closed - Opened by ctberthiaume over 5 years ago - 1 comment

#58 - Consider Apache Arrow to replace OPP when ready

Issue - State: closed - Opened by ctberthiaume over 5 years ago - 1 comment
Labels: enhancement

#57 - Better way to upgrade dependencies

Issue - State: closed - Opened by ctberthiaume over 5 years ago - 1 comment
Labels: enhancement

#56 - Better build / install workflow for docs

Issue - State: open - Opened by ctberthiaume over 5 years ago
Labels: enhancement

#55 - Public interface exports too many functions

Issue - State: open - Opened by ctberthiaume over 5 years ago
Labels: enhancement

#54 - readSeaflow doesn't check for too much data

Issue - State: closed - Opened by ctberthiaume almost 6 years ago - 1 comment
Labels: enhancement

#53 - readSeaflow and get.opp.by.file have different signatures for similar tasks

Issue - State: closed - Opened by ctberthiaume almost 6 years ago - 2 comments
Labels: enhancement

#52 - `get.opp.files` doesn't properly remove outliers

Issue - State: closed - Opened by ctberthiaume about 6 years ago - 2 comments

#51 - Update README.md

Pull Request - State: closed - Opened by ANetTow about 6 years ago

#50 - Spurious errors when gating

Issue - State: closed - Opened by ctberthiaume about 6 years ago

#49 - zombie VCT results

Issue - State: closed - Opened by ctberthiaume about 6 years ago - 1 comment

#48 - plot_map documentation

Issue - State: open - Opened by ANetTow about 6 years ago

#47 - warning message about "max(abs(i))" and "-Inf" when auto classifying

Issue - State: closed - Opened by ctberthiaume about 6 years ago - 1 comment

#46 - track all attempts to filter EVT files

Issue - State: closed - Opened by ctberthiaume over 6 years ago - 1 comment

#45 - filter / gating parameters times are local

Issue - State: closed - Opened by ctberthiaume over 6 years ago - 1 comment

#44 - classify.opp

Issue - State: open - Opened by ANetTow over 6 years ago

#43 - Functions calling "file.path"

Issue - State: open - Opened by ANetTow over 6 years ago

#42 - unknown timezone warning in `save.filter.params`

Issue - State: closed - Opened by ctberthiaume almost 7 years ago

#41 - Create LICENSE

Pull Request - State: closed - Opened by fribalet almost 7 years ago

#40 - seaflowpy_filter not accepting NA

Issue - State: closed - Opened by fribalet over 8 years ago - 1 comment

#39 - import_sfl.py creates incorrect timestamp

Issue - State: closed - Opened by ctberthiaume about 9 years ago
Labels: bug

#38 - error importing SFL files for SCOPE_7_DLM cruise

Issue - State: closed - Opened by ctberthiaume about 9 years ago - 1 comment
Labels: bug

#37 - get.opp.files() function is very slow.

Issue - State: closed - Opened by fribalet over 9 years ago

#36 - trouble importing cruise.sfl into sqlit3

Issue - State: closed - Opened by fribalet over 9 years ago - 1 comment

#35 - Real-time problem

Issue - State: closed - Opened by fribalet over 9 years ago

#34 - bug in plot.gate.cytogram

Issue - State: closed - Opened by ctberthiaume over 9 years ago
Labels: bug

#33 - error in plot.filter.cytogram

Issue - State: closed - Opened by ctberthiaume over 9 years ago - 1 comment
Labels: bug

#32 - unable to set project location and popcycle.db-journal file created

Issue - State: closed - Opened by sophieclayton over 9 years ago - 2 comments

#31 - using multiple files for gating

Issue - State: closed - Opened by sophieclayton over 9 years ago - 9 comments

#30 - bug in new function get.opp.by.date

Issue - State: closed - Opened by gmmh almost 10 years ago - 2 comments

#29 - unable to open database file for new project

Issue - State: closed - Opened by sophieclayton almost 10 years ago - 1 comment

#28 - implementing timestamps for PMT changes

Issue - State: closed - Opened by sophieclayton almost 10 years ago - 1 comment
Labels: enhancement

#27 - Problem with filter.evt.files.parallel

Issue - State: closed - Opened by fribalet almost 10 years ago

#26 - Problem with filter.evt.files.parallel

Issue - State: closed - Opened by fribalet almost 10 years ago - 1 comment

#25 - Update README.md

Pull Request - State: closed - Opened by mmh1133 about 10 years ago

#24 - Add Instrument info to apply the appropriate ratio_evt_stream

Issue - State: closed - Opened by fribalet about 10 years ago

#23 - suggest adding this function to retrieve opp.evt.ratio

Issue - State: closed - Opened by gmmh about 10 years ago - 1 comment

#22 - additional features

Issue - State: closed - Opened by fribalet about 10 years ago

#21 - stat table empty(?) after gating

Issue - State: closed - Opened by mmh1133 about 10 years ago - 1 comment

#20 - get.opp.list function

Issue - State: closed - Opened by fribalet about 10 years ago - 1 comment

#19 - fix_sfl.py adds quotes to my headers and file names

Issue - State: closed - Opened by gmmh about 10 years ago

#18 - run.gating

Issue - State: closed - Opened by mmh1133 about 10 years ago - 1 comment

#17 - opp.name error

Issue - State: closed - Opened by mmh1133 about 10 years ago - 4 comments

#16 - deleting sfl from database and replacing with new values

Issue - State: closed - Opened by gmmh about 10 years ago - 2 comments

#15 - Add time section to file.in.range() (i.e., select data by time, not only by file name)

Issue - State: closed - Opened by fribalet about 10 years ago

#14 - db overwrite

Issue - State: closed - Opened by mmh1133 about 10 years ago - 3 comments

#13 - gating functions

Issue - State: closed - Opened by gmmh about 10 years ago - 3 comments

#12 - Errors in functions for specifying new project location

Issue - State: closed - Opened by gmmh about 10 years ago - 1 comment

#11 - plot.filter.cytogram plots missing

Issue - State: closed - Opened by mmh1133 about 10 years ago

#10 - setup.R issue

Issue - State: closed - Opened by mmh1133 about 10 years ago - 1 comment

#9 - best.filter.notch 1

Issue - State: closed - Opened by fribalet about 10 years ago - 1 comment
Labels: bug

#8 - best.filter.notch 2

Issue - State: closed - Opened by fribalet about 10 years ago - 1 comment
Labels: bug

#7 - Parallel filter

Pull Request - State: closed - Opened by ctberthiaume over 10 years ago - 2 comments

#6 - Filter test

Pull Request - State: closed - Opened by fribalet over 10 years ago

#5 - Update README.md

Pull Request - State: closed - Opened by mmh1133 over 10 years ago

#4 - Add travis ci

Pull Request - State: closed - Opened by dhalperi over 10 years ago - 2 comments

#3 - files.in.range() doesn't work with old evt file name

Issue - State: closed - Opened by fribalet over 10 years ago
Labels: enhancement

#2 - insert.stats.for.file() not working properly

Issue - State: closed - Opened by fribalet over 10 years ago - 1 comment
Labels: bug

#1 - Add SQL schema and example EVT/OPP loader

Pull Request - State: closed - Opened by dhalperi over 10 years ago - 2 comments

GitHub / seaflow-uw/popcycle issues and pull requests