scverse/spatialdata-plot issues and pull requests

#71 - Plotting multiple elements in the same `ax` seems to work only when `show()` is not called.

Issue - State: open - Opened by LucaMarconato over 1 year ago - 2 comments
Labels: bug, enhancement, priority: low

#70 - Order of plot not respected (can't see points below shapes)

Issue - State: closed - Opened by LucaMarconato over 1 year ago - 1 comment
Labels: bug, priority: medium

#69 - Cannot plot multiple shapes elements

Issue - State: closed - Opened by LucaMarconato over 1 year ago - 3 comments

#68 - `pl.show()` still not working (?) in interactive mode

Issue - State: open - Opened by LucaMarconato over 1 year ago - 3 comments

#67 - install spatialdata from pypi

Pull Request - State: closed - Opened by kevinyamauchi over 1 year ago

#66 - add deploy to github actions

Pull Request - State: closed - Opened by kevinyamauchi over 1 year ago

#65 - [bug] plotting using pp.get_elements plots all coordinate systems

Issue - State: closed - Opened by melonora over 1 year ago - 3 comments
Labels: bug, documentation

#64 - bugfix

Pull Request - State: closed - Opened by timtreis over 1 year ago

#63 - zorder of borders in `render_labels` is weird - refactor

Issue - State: closed - Opened by timtreis over 1 year ago
Labels: bug

#62 - Updated figure in README

Pull Request - State: closed - Opened by timtreis over 1 year ago

#61 - Feature/202304 update readme

Pull Request - State: closed - Opened by sagar87 over 1 year ago

#60 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago

#59 - Merged tests from broken PR

Pull Request - State: closed - Opened by timtreis over 1 year ago

#58 - No plot is shown when calling form command-line

Issue - State: closed - Opened by timtreis over 1 year ago
Labels: bug

#57 - fix translation bug from issue #53

Pull Request - State: closed - Opened by timtreis over 1 year ago

#56 - simple multiscale support

Pull Request - State: closed - Opened by timtreis over 1 year ago

#55 - Refactor render channels to render images

Pull Request - State: closed - Opened by sagar87 over 1 year ago - 1 comment

#54 - Feature request: remove need for intermediate pl calls when chaining renderers

Issue - State: open - Opened by kevinyamauchi over 1 year ago - 2 comments
Labels: enhancement, priority: low

#53 - render_images() doesn't account for image translations

Issue - State: closed - Opened by kevinyamauchi over 1 year ago - 8 comments
Labels: bug

#52 - Fix codecov CI and update template

Pull Request - State: closed - Opened by grst over 1 year ago - 2 comments

#51 - minor fix for specifying the element

Pull Request - State: closed - Opened by giovp over 1 year ago

#50 - Make _get_extent a utils function

Pull Request - State: closed - Opened by timtreis over 1 year ago - 1 comment

#49 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago

#48 - Consider using `NamedTuple` instead of dictionaries

Issue - State: closed - Opened by giovp over 1 year ago - 2 comments
Labels: bug, enhancement

#47 - consider removing `_copy` private method

Issue - State: open - Opened by giovp over 1 year ago
Labels: enhancement, priority: low

#46 - why `render_channels` is a separate method and it's not an argument in the `render_image` method?

Issue - State: closed - Opened by giovp over 1 year ago - 2 comments
Labels: bug

#45 - add squidpy way to handle segment

Pull Request - State: closed - Opened by giovp over 1 year ago - 4 comments

#44 - Basic documentation

Pull Request - State: closed - Opened by sagar87 over 1 year ago - 2 comments

#43 - Added translation logic

Pull Request - State: closed - Opened by timtreis over 1 year ago - 2 comments

#42 - Bugfix/render channels

Pull Request - State: closed - Opened by sagar87 over 1 year ago

#41 - `render_shapes` now plots polygons

Pull Request - State: closed - Opened by timtreis over 1 year ago

#40 - Basic structure for comparing generated plots in unit tests

Pull Request - State: closed - Opened by giovp over 1 year ago - 2 comments

#39 - mvp for render_points

Pull Request - State: closed - Opened by timtreis over 1 year ago

#38 - Bugfix and Speedup for `render_labels`

Pull Request - State: closed - Opened by timtreis over 1 year ago - 1 comment

#37 - Typehints in docstring of functions is redundant and removed by readthedocs anyway

Issue - State: closed - Opened by timtreis over 1 year ago - 2 comments
Labels: bug

#36 - Minor bugs in `render_shapes`

Issue - State: closed - Opened by timtreis over 1 year ago
Labels: bug

#35 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago

#34 - Fix palette bug in `render_shapes`

Pull Request - State: closed - Opened by timtreis over 1 year ago

#33 - Added codecov badge to README

Pull Request - State: closed - Opened by timtreis over 1 year ago

#32 - Revert "Create codecov.yml"

Pull Request - State: closed - Opened by timtreis over 1 year ago

#31 - Create codecov.yml

Pull Request - State: closed - Opened by timtreis over 1 year ago - 1 comment

#30 - Added script to run real-world data

Pull Request - State: closed - Opened by timtreis over 1 year ago - 1 comment

#29 - `render_shapes` fails because of `mypy` compliance check

Issue - State: closed - Opened by timtreis over 1 year ago
Labels: bug

#28 - Plotting with random colours is slow

Issue - State: closed - Opened by timtreis over 1 year ago - 1 comment
Labels: enhancement

#27 - Tests for pp.get_bb

Pull Request - State: closed - Opened by sagar87 over 1 year ago - 1 comment

#26 - Added tests to render_images

Pull Request - State: closed - Opened by timtreis over 1 year ago - 1 comment

#25 - Feature/202303 render channels

Pull Request - State: closed - Opened by sagar87 over 1 year ago - 1 comment

#24 - Ugly catch-all PR to get racoons rolling

Pull Request - State: closed - Opened by timtreis over 1 year ago - 2 comments

#23 - MVP for `render_images`

Pull Request - State: closed - Opened by timtreis over 1 year ago - 1 comment

#22 - Priorities 21-03

Issue - State: closed - Opened by giovp over 1 year ago - 2 comments
Labels: enhancement

#21 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago

#20 - adapation to the new modules hierarchy

Pull Request - State: closed - Opened by LucaMarconato over 1 year ago

#19 - [pre-commit.ci] pre-commit autoupdate

Pull Request - State: closed - Opened by pre-commit-ci[bot] over 1 year ago

#18 - mypy fixes

Pull Request - State: closed - Opened by timtreis over 1 year ago - 1 comment

#17 - fix docs

Pull Request - State: closed - Opened by giovp over 1 year ago - 4 comments

#16 - bugfix in execution_tree logic; table filtering in `get_elements()`

Pull Request - State: closed - Opened by timtreis over 1 year ago - 1 comment

#15 - Automated template update from cookiecutter-scverse

Pull Request - State: closed - Opened by github-actions[bot] over 1 year ago

#14 - bugfix in `get_elements()` plus demo notebook

Pull Request - State: closed - Opened by timtreis over 1 year ago - 1 comment

#13 - mvp

Pull Request - State: closed - Opened by timtreis over 1 year ago

#12 - feedback from meeting 07-03

Issue - State: closed - Opened by giovp over 1 year ago
Labels: enhancement

#11 - Plotting of groups and continuos variables together

Issue - State: closed - Opened by giovp over 1 year ago
Labels: enhancement

#10 - execution tree and render_labels logic

Pull Request - State: closed - Opened by timtreis over 1 year ago

#9 - Use execution tree to make plotting easier

Pull Request - State: closed - Opened by timtreis over 1 year ago

#8 - Features/202302 tl module

Pull Request - State: closed - Opened by sagar87 over 1 year ago - 3 comments

#7 - Feature/202302 refactor plotting

Pull Request - State: closed - Opened by sagar87 almost 2 years ago - 1 comment

#6 - Feature: get_polygons()

Pull Request - State: closed - Opened by timtreis almost 2 years ago - 1 comment

#5 - Improves get_channels

Pull Request - State: closed - Opened by timtreis almost 2 years ago

#4 - MVP for polygon tools

Pull Request - State: closed - Opened by timtreis almost 2 years ago - 1 comment

#3 - Plotting MVP

Pull Request - State: closed - Opened by timtreis almost 2 years ago - 1 comment

#2 - Updated starter code

Pull Request - State: closed - Opened by sagar87 almost 2 years ago - 1 comment

#1 - Some starter code

Pull Request - State: closed - Opened by sagar87 almost 2 years ago - 1 comment

GitHub / scverse/spatialdata-plot issues and pull requests