Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / scverse/muon issues and pull requests
#40 - Empty uns after reloading causes mu.pp.neighbors error
Issue -
State: closed - Opened by emdann about 3 years ago
Labels: bug
#39 - Aggregating peaks doesn't work at all
Issue -
State: closed - Opened by maxim-h about 3 years ago
- 1 comment
Labels: bug
#38 - add pysam dependency
Pull Request -
State: closed - Opened by maxim-h about 3 years ago
- 1 comment
#37 - ATAC QC error
Issue -
State: closed - Opened by taopeng1100 about 3 years ago
- 4 comments
Labels: enhancement
#36 - Copying MuData objects
Issue -
State: closed - Opened by gtca about 3 years ago
- 8 comments
#35 - Update preproc.py
Pull Request -
State: closed - Opened by WeilerP about 3 years ago
#34 - Simplify sparsity check
Issue -
State: closed - Opened by WeilerP about 3 years ago
- 2 comments
#33 - Fix / tabs to spaces
Pull Request -
State: closed - Opened by WeilerP about 3 years ago
- 1 comment
#32 - Indentation contains mixed spaces and tabs
Issue -
State: closed - Opened by WeilerP about 3 years ago
#31 - unify logging
Issue -
State: open - Opened by ilia-kats over 3 years ago
- 1 comment
#30 - Can't get copy for a view
Issue -
State: closed - Opened by liuzj039 over 3 years ago
Labels: bug
#29 - Triger AttributeError "X not found" when use layer parameter in mu.tl.embedding
Issue -
State: closed - Opened by liuzj039 over 3 years ago
- 3 comments
Labels: bug
#28 - Feat / seurat flavored clr
Pull Request -
State: closed - Opened by WeilerP over 3 years ago
- 2 comments
#27 - Seurat flavored CLR
Issue -
State: closed - Opened by WeilerP over 3 years ago
Labels: enhancement
#26 - Switch build system over to flit
Pull Request -
State: closed - Opened by ilia-kats over 3 years ago
#25 - fix installation
Pull Request -
State: closed - Opened by pjb7687 over 3 years ago
- 13 comments
#23 - In-place filtering is ambiguous for Views
Issue -
State: closed - Opened by gtca over 3 years ago
- 1 comment
Labels: enhancement
#22 - HTML representation for Jupyter notebooks
Issue -
State: closed - Opened by gtca over 3 years ago
Labels: enhancement
#21 - Aggregating peaks doesn't work for backed objects
Issue -
State: closed - Opened by gtca over 3 years ago
Labels: bug, atac
#20 - Refactor fragments
Pull Request -
State: open - Opened by mffrank almost 4 years ago
- 1 comment
#19 - Introduce explicit syntax to detach backed modalities
Issue -
State: open - Opened by gtca almost 4 years ago
Labels: enhancement
#18 - .copy() doesn't work for backed files
Issue -
State: closed - Opened by gtca almost 4 years ago
- 3 comments
Labels: bug
#17 - Reading a backed AnnData from the .h5mu fails
Issue -
State: closed - Opened by gtca almost 4 years ago
- 9 comments
Labels: bug
#16 - Implement multimodal nearest neighbor search
Pull Request -
State: closed - Opened by ilia-kats almost 4 years ago
- 1 comment
#15 - Mefisto
Pull Request -
State: closed - Opened by bv2 almost 4 years ago
#14 - MOFA: samples_names and samples_groups do not match if samples in AnnData are not sorted by group
Issue -
State: closed - Opened by bv2 almost 4 years ago
Labels: bug
#13 - implement obsp/varp for MuData objects (closes #11)
Pull Request -
State: closed - Opened by ilia-kats almost 4 years ago
#12 - Implement louvain and leiden algorithms accepting multiple graphs
Issue -
State: closed - Opened by gtca almost 4 years ago
Labels: enhancement
#11 - Enable .obsp / .varp for MuData
Issue -
State: closed - Opened by gtca almost 4 years ago
Labels: enhancement
#10 - New I/O & plotting functions and CITE-seq-related functionality
Pull Request -
State: closed - Opened by gtca almost 4 years ago
#9 - Implement DSB normalization for CiteSEQ data (closes #4)
Pull Request -
State: closed - Opened by ilia-kats almost 4 years ago
#8 - enforce black code style, black-ify existing code
Pull Request -
State: closed - Opened by ilia-kats almost 4 years ago
#7 - do not expose our internal structure in the docs
Pull Request -
State: closed - Opened by ilia-kats almost 4 years ago
#6 - enable slicing for MuData objects (closes #3)
Pull Request -
State: closed - Opened by ilia-kats almost 4 years ago
- 3 comments
#5 - Genome bins
Pull Request -
State: closed - Opened by mffrank almost 4 years ago
#4 - Implement dsb normalisation for CITE-seq data
Issue -
State: closed - Opened by gtca about 4 years ago
Labels: enhancement
#3 - Implement MuData object slicing
Issue -
State: closed - Opened by gtca about 4 years ago
- 2 comments
Labels: enhancement
#2 - File backing
Pull Request -
State: closed - Opened by ilia-kats about 4 years ago
- 1 comment
#1 - Implement `backed` for AnnData and .h5mu files, MuData
Issue -
State: closed - Opened by gtca about 4 years ago
Labels: enhancement