scvae/scvae issues and pull requests

#21 - how I get early stop model and Z?

Issue - State: open - Opened by wenyuhaokikika 7 months ago

#20 - ValueError: Data format already specified in metadata and cannot be changed (is `gz`; wanted `matrix_fbe`).

Issue - State: open - Opened by wenyuhaokikika 9 months ago - 3 comments

#19 - urllib.error.HTTPError: HTTP Error 403: Forbidden

Issue - State: open - Opened by handesome 10 months ago - 4 comments

#18 - Working with SCVAE to analyse single cell RNA seq data

Issue - State: open - Opened by varunshankar1997 over 1 year ago

#17 - does scvae support pytorch and scanpy?

Issue - State: open - Opened by chansigit over 2 years ago

#16 - 10x Issue

Issue - State: open - Opened by kgj1234 almost 3 years ago

#15 - Training and validation loss becomes NaN

Issue - State: closed - Opened by gprashant17 about 4 years ago - 3 comments

#14 - Error while performing evaluation

Issue - State: closed - Opened by gprashant17 about 4 years ago - 3 comments

#13 - Loading HDF5 datasets crash because data_dictionary["example names"] is set to None

Issue - State: closed - Opened by znamensk about 4 years ago - 1 comment

#12 - getting actual points in tSNE reconstructions

Issue - State: closed - Opened by sshen82 over 4 years ago

#11 - Getting data from latent z-space

Issue - State: closed - Opened by gcgreenberg96 over 4 years ago - 1 comment

#10 - OSError: [Errno 22] during scvae evaluate

Issue - State: closed - Opened by pchiang5 over 4 years ago - 1 comment

#9 - Data format h5 not recognised,and 10x wanted (but I set format="10x"

Issue - State: closed - Opened by yejg2017 almost 5 years ago - 1 comment

#8 - TypeError: init() got an unexpected keyword argument 'required'

Issue - State: closed - Opened by xuebaliang almost 5 years ago - 2 comments

#7 - What does the loom format dataset look like specifically?

Issue - State: closed - Opened by xuebaliang almost 5 years ago - 2 comments

#6 - Seurat objects

Issue - State: open - Opened by zhaleh-safikhani over 5 years ago - 1 comment

#5 - AttributeError: 'NoneType' object has no attribute 'points_to_pixels'

Issue - State: closed - Opened by bkaczkowski over 5 years ago - 4 comments

#4 - ZeroInflated distribution

Issue - State: closed - Opened by trungnt13 over 5 years ago - 1 comment

#3 - Multiple h5 for processing and tissue integration

Issue - State: closed - Opened by cartal almost 6 years ago - 3 comments

#2 - How to run the commands for mnist dataset ?

Issue - State: closed - Opened by chulaihunde about 6 years ago - 1 comment

#1 - Create LICENSE.txt

Pull Request - State: closed - Opened by chgroenbech about 6 years ago

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