Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / scipion-em/scipion-em-tomo issues and pull requests

#438 - Jj refactor ts estimate ctf

Pull Request - State: open - Opened by JorMaister 6 months ago - 1 comment

#437 - Napari 0.4.17 is the default version. boxmanager and tomotwin are now…

Pull Request - State: open - Opened by azazellochg 7 months ago - 1 comment

#435 - Jj fix fit ellipsoid prot

Pull Request - State: open - Opened by JorMaister 7 months ago - 1 comment

#434 - I is not possible to generate subsets of landmark models

Issue - State: open - Opened by fede-pe 7 months ago
Labels: bug

#433 - Refactor the protocol fit vesicles

Issue - State: open - Opened by JorMaister 7 months ago
Labels: enhancement

#431 - Prevent viewers from locking the screen focus. Version bumped.

Pull Request - State: closed - Opened by JorMaister 7 months ago - 1 comment

#430 - TS movies not hiding any acquisition parameter to prevent accidental …

Pull Request - State: closed - Opened by JorMaister 7 months ago - 2 comments

#429 - Release 3.4.1

Pull Request - State: closed - Opened by pconesa 7 months ago - 1 comment

#428 - templates tweaks

Pull Request - State: closed - Opened by pconesa 7 months ago - 1 comment

#427 - Fi update template

Pull Request - State: closed - Opened by fede-pe 7 months ago - 1 comment

#426 - Jj update hiv template

Pull Request - State: closed - Opened by JorMaister 7 months ago - 1 comment

#425 - Release 3.4.0

Pull Request - State: closed - Opened by JorMaister 7 months ago - 1 comment

#424 - picking Template tweaks

Pull Request - State: closed - Opened by pconesa 7 months ago - 1 comment

#423 - Jj fix import coords sci schedule

Pull Request - State: closed - Opened by JorMaister 7 months ago - 1 comment

#422 - fix silly mistakes

Pull Request - State: closed - Opened by azazellochg 7 months ago

#421 - Oddeven filenames

Pull Request - State: closed - Opened by Vilax 7 months ago

#420 - Napari viewer list 0 coordinates

Issue - State: closed - Opened by pconesa 8 months ago - 5 comments

#419 - Oddeven filenames

Pull Request - State: closed - Opened by Vilax 8 months ago

#418 - segmentation to mesh needs mrcfile 1.4+

Pull Request - State: closed - Opened by pconesa 8 months ago

#417 - HIV STA template divided into 2: Dynamo STA and Relion4 STA

Pull Request - State: closed - Opened by pconesa 8 months ago

#416 - relaxing tomo mask condition

Pull Request - State: closed - Opened by Vilax 8 months ago

#415 - Truncate decimal position in SetOfCoordinates string

Pull Request - State: closed - Opened by JorMaister 8 months ago - 1 comment

#414 - allow to sort by acqOrder, sorting by Included is not possible

Pull Request - State: closed - Opened by azazellochg 8 months ago

#412 - Update changes.txt link

Pull Request - State: closed - Opened by albertmena 8 months ago

#411 - Jj test centralized updated upper pipeline

Pull Request - State: closed - Opened by JorMaister 8 months ago

#410 - data set uploaded to buildbot

Pull Request - State: closed - Opened by Vilax 8 months ago

#409 - mesh from segmemtation

Pull Request - State: closed - Opened by Vilax 8 months ago

#408 - Fi improve misali ts

Pull Request - State: closed - Opened by fede-pe 8 months ago

#407 - Allowing tilt series with gaps

Pull Request - State: closed - Opened by albertmena 9 months ago

#406 - release devel

Pull Request - State: closed - Opened by azazellochg 9 months ago - 2 comments

#405 - fix step deps if no process Ti used

Pull Request - State: closed - Opened by azazellochg 9 months ago - 1 comment

#404 - ComposeTS seem to be confused!!

Issue - State: closed - Opened by pconesa 10 months ago - 3 comments
Labels: bug

#403 - Jj expand test centralized layer

Pull Request - State: closed - Opened by JorMaister 10 months ago

#402 - Jj fix coords import diff sizes

Pull Request - State: closed - Opened by JorMaister 10 months ago - 1 comment

#401 - Jj import ts numeric basenames

Pull Request - State: closed - Opened by pconesa 10 months ago

#400 - Fi improve ts assign tm

Pull Request - State: closed - Opened by fede-pe 10 months ago

#398 - import coordinates does not rescale

Issue - State: closed - Opened by Vilax 10 months ago - 1 comment

#395 - Jj improve tsm import pattern

Pull Request - State: closed - Opened by JorMaister 10 months ago - 3 comments

#394 - fix alignment flag wrongly propagated

Pull Request - State: closed - Opened by pconesa 10 months ago - 1 comment

#393 - centralize napari binary installation and config var

Pull Request - State: closed - Opened by azazellochg 10 months ago - 6 comments

#392 - Add hasResidualInfo parameter to Landmark models

Pull Request - State: closed - Opened by fede-pe 10 months ago

#391 - Missing manual acquisition params in import subtomograms

Issue - State: open - Opened by MartinSalinas98 10 months ago
Labels: bug

#390 - Releasing 3.2.0

Pull Request - State: closed - Opened by pconesa 11 months ago

#389 - Compose tilt series: Added "exclusion words" to filter out mdocs

Pull Request - State: closed - Opened by pconesa 11 months ago

#387 - Fix import tomo protocol

Pull Request - State: closed - Opened by JorMaister 11 months ago

#386 - Tweaks

Pull Request - State: closed - Opened by pconesa 11 months ago

#385 - odd/even TS sets stay opened

Issue - State: open - Opened by azazellochg 11 months ago
Labels: bug

#383 - Utils, fix method _getTsIdLabel

Pull Request - State: closed - Opened by JorMaister 12 months ago

#382 - Added a template for tomo streaming

Pull Request - State: closed - Opened by albertmena 12 months ago

#381 - Open tilt series with ImageJ

Issue - State: closed - Opened by Vilax 12 months ago - 1 comment

#380 - Added attribute ctfCorrected to set of tomograms

Pull Request - State: closed - Opened by MartinSalinas98 12 months ago - 1 comment
Labels: enhancement

#379 - strange behaviour of tomo3d denoiser in aretomo reconstruction

Issue - State: open - Opened by plosana 12 months ago - 5 comments

#378 - Fixes #377

Pull Request - State: closed - Opened by JorMaister about 1 year ago - 2 comments

#377 - Allow tomo to mics to make an averge

Issue - State: closed - Opened by pconesa about 1 year ago - 5 comments

#376 - - Tolerate empty lines in tlt files

Pull Request - State: closed - Opened by pconesa about 1 year ago

#375 - error importing from tlt

Issue - State: open - Opened by Vilax about 1 year ago - 9 comments

#374 - Fix landmarks to coordinates 2d

Pull Request - State: closed - Opened by pconesa about 1 year ago

#373 - SetOfTomoMask cannot ve visualized

Issue - State: closed - Opened by Vilax about 1 year ago - 2 comments

#372 - Fi feature import ts coords

Pull Request - State: closed - Opened by fede-pe about 1 year ago

#371 - - New protocol: "Landmarks to 2D coordinates". To jump to SPA from 3d…

Pull Request - State: closed - Opened by pconesa about 1 year ago

#370 - Releasing 3.0.9

Pull Request - State: closed - Opened by pconesa about 1 year ago

#369 - Fix templates

Pull Request - State: closed - Opened by pconesa about 1 year ago

#368 - - Reconstruction template fixed.

Pull Request - State: closed - Opened by pconesa about 1 year ago - 1 comment

#367 - - Reconstruction template fixed.

Pull Request - State: closed - Opened by pconesa about 1 year ago

#366 - Robust subtomogram volname

Pull Request - State: closed - Opened by pconesa about 1 year ago

#365 - Compose TS

Pull Request - State: closed - Opened by albertmena about 1 year ago

#364 - HIV template tweaked: one 3d classification removed. Mapback uses the…

Pull Request - State: closed - Opened by pconesa about 1 year ago - 1 comment

#363 - Update CHANGES.txt

Pull Request - State: closed - Opened by fonsecareyna82 about 1 year ago

#362 - New protocol: CTF tomo consensus

Pull Request - State: closed - Opened by danielmarchan3 about 1 year ago - 3 comments

#361 - fix import Ccp4Heder

Pull Request - State: closed - Opened by pconesa about 1 year ago - 1 comment

#360 - fix odd-even ti location

Pull Request - State: closed - Opened by azazellochg about 1 year ago - 1 comment

#359 - ComposeTS: possibleOutputs

Pull Request - State: closed - Opened by albertmena about 1 year ago

#358 - ComoseTS: improves and fixes

Pull Request - State: closed - Opened by albertmena about 1 year ago

#357 - release last fix about 3d classes

Pull Request - State: closed - Opened by pconesa about 1 year ago

#356 - - SetOfSubtomoClasses improved: sampling rate set, coordinates injected

Pull Request - State: closed - Opened by pconesa about 1 year ago

#355 - release 3.1.7

Pull Request - State: closed - Opened by pconesa about 1 year ago

#354 - Templates tweaked: title and some mpi values

Pull Request - State: closed - Opened by pconesa about 1 year ago

#353 - Problem getting ProtComposeTS to work in streaming

Issue - State: closed - Opened by olofsvensson about 1 year ago - 11 comments
Labels: bug, help wanted

#352 - release devel

Pull Request - State: closed - Opened by pconesa about 1 year ago

#351 - compose_TS: improvements

Pull Request - State: closed - Opened by albertmena about 1 year ago

#350 - - HIV Reconstruction workflow template fixed (tomograms origin take…

Pull Request - State: closed - Opened by pconesa about 1 year ago - 1 comment

#349 - Streaming import of Tilt-SeriesMovies doesn't work

Issue - State: closed - Opened by olofsvensson about 1 year ago - 4 comments

#348 - - Pyseg workflow template fixed (extra graphs removed)

Pull Request - State: closed - Opened by pconesa about 1 year ago

#347 - So coords tweaks

Pull Request - State: closed - Opened by pconesa about 1 year ago - 5 comments

#346 - Fix getTomo

Pull Request - State: closed - Opened by JorMaister over 1 year ago

#345 - - Import Tilt series or Import tilt series movies do not work in st…

Pull Request - State: closed - Opened by pconesa over 1 year ago

#344 - fix DW TS output from motion correction

Pull Request - State: closed - Opened by azazellochg over 1 year ago

#343 - fix dw saving in mc2 for TS

Issue - State: closed - Opened by azazellochg over 1 year ago

#342 - - Fix: subtomograms with coordinates work in absence of volId

Pull Request - State: closed - Opened by pconesa over 1 year ago

#341 - release numpy wrong import

Pull Request - State: closed - Opened by pconesa over 1 year ago

#340 - hot fix in test centralized layer, invalid import

Pull Request - State: closed - Opened by JorMaister over 1 year ago

#339 - Releasing 3.1.4

Pull Request - State: closed - Opened by pconesa over 1 year ago