Ecosyste.ms: Issues
An open API service for providing issue and pull request metadata for open source projects.
GitHub / scipion-em/scipion-em-reliontomo issues and pull requests
#108 - Release 4.0.0 hot fix
Pull Request -
State: closed - Opened by JorMaister 4 days ago
- 1 comment
#107 - Release 4.0.0
Pull Request -
State: closed - Opened by JorMaister 5 days ago
- 1 comment
#106 - Update version
Pull Request -
State: closed - Opened by JorMaister 5 days ago
- 1 comment
#105 - Jj fix mot corr tests
Pull Request -
State: closed - Opened by JorMaister about 1 month ago
- 2 comments
#104 - Improve the validations in protocols autorefine and classify 3d
Pull Request -
State: closed - Opened by JorMaister about 2 months ago
- 1 comment
#103 - Fix convert for 3D particles in Relion 5.
Pull Request -
State: closed - Opened by JorMaister about 2 months ago
- 1 comment
#102 - Jj small fixes by jlv
Pull Request -
State: closed - Opened by JorMaister 2 months ago
- 1 comment
#101 - Re-extract does not generate the fiducials anymore. Update tests. Add…
Pull Request -
State: closed - Opened by JorMaister 4 months ago
- 1 comment
#100 - Jj reliontomo5
Pull Request -
State: closed - Opened by JorMaister 4 months ago
- 2 comments
#99 - Jj jj reliontomo5 nested dirs
Pull Request -
State: closed - Opened by JorMaister 4 months ago
- 1 comment
#98 - - Fix inspect in buildbot: Tkagg not set in wizard module.
Pull Request -
State: closed - Opened by pconesa 4 months ago
- 1 comment
#97 - Jj deprecate re3 and improve warns
Pull Request -
State: closed - Opened by JorMaister 6 months ago
- 1 comment
#96 - Prevent box sizes to be of the same value
Issue -
State: open - Opened by JorMaister 6 months ago
#95 - Release 3.3.0
Pull Request -
State: closed - Opened by JorMaister 6 months ago
- 1 comment
#94 - Release 3.4.0
Pull Request -
State: closed - Opened by JorMaister 6 months ago
- 1 comment
#93 - Enhancing the helps and use of RelionTomo4
Pull Request -
State: closed - Opened by Vilax 7 months ago
- 1 comment
#92 - Fixes #90 #91
Pull Request -
State: closed - Opened by JorMaister 7 months ago
- 1 comment
#91 - A small 'bug'. This protocol (extract particle from TS) needs at least 2 MPI (it states in the error message). It might be good to give it as deafult 2 (and not 1).
Issue -
State: closed - Opened by JorMaister 7 months ago
- 1 comment
Labels: bug
#90 - RELION tomo protocols should have "Additional options" tab (only auto-refine seems to have it)
Issue -
State: closed - Opened by pconesa 7 months ago
Labels: enhancement
#89 - Jj update tests add likely max dist
Pull Request -
State: open - Opened by JorMaister 8 months ago
- 1 comment
#88 - Add the rest of the params of a refine/classify resulting data.star file to be stored in the metadata, so they can be plotted in Scipion
Issue -
State: open - Opened by JorMaister 8 months ago
#87 - Release 3.2.2
Pull Request -
State: closed - Opened by JorMaister 8 months ago
- 1 comment
#86 - Fix the 3d classification Scipion Classes objects generation (previou…
Pull Request -
State: closed - Opened by JorMaister 8 months ago
- 1 comment
#85 - Fix: the coordinates generated in the convert input step of the prepa…
Pull Request -
State: closed - Opened by JorMaister 8 months ago
- 1 comment
#84 - Verify relion prepare with excluded views.
Issue -
State: closed - Opened by pconesa 9 months ago
#83 - Jj hotfix prot visualization, imod tlt file generation method called to consider the excluded views
Pull Request -
State: closed - Opened by JorMaister 10 months ago
- 1 comment
#82 - Release patched
Pull Request -
State: closed - Opened by JorMaister 10 months ago
- 1 comment
#81 - Update MANIFEST.in
Pull Request -
State: closed - Opened by pconesa 10 months ago
- 1 comment
#80 - v3.2.1
Pull Request -
State: closed - Opened by pconesa 10 months ago
- 1 comment
#79 - Installation requirements better managed. Version bumped. Small fix i…
Pull Request -
State: closed - Opened by JorMaister 10 months ago
#78 - Tests check the alignment attribute in the generated sets of particles
Pull Request -
State: closed - Opened by JorMaister about 1 year ago
#77 - Jj fix tests
Pull Request -
State: closed - Opened by JorMaister about 1 year ago
#76 - Fix: Relion output now copies the acquisition.
Pull Request -
State: closed - Opened by pconesa about 1 year ago
#75 - Add extra validation to the prepare protocol and cover aligned TS case
Issue -
State: closed - Opened by JorMaister over 1 year ago
#74 - bump version to 3.2.0
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#73 - release 3.2.0
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#72 - * Adding a menu bar
Pull Request -
State: closed - Opened by fonsecareyna82 over 1 year ago
#71 - Wizard reliontomoo part
Pull Request -
State: closed - Opened by fonsecareyna82 over 1 year ago
#70 - Update CHANGES.txt
Pull Request -
State: closed - Opened by fonsecareyna82 over 1 year ago
#69 - - 3D Classification defines its possible outputs
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#68 - * Plotting all FSCs
Pull Request -
State: closed - Opened by fonsecareyna82 over 1 year ago
- 1 comment
#67 - release 3d classification fix and refine using optimization set
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#66 - Refine and 3D classification use and register optimisation_set.star f…
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#65 - - 3D Classification more completed/standard
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#64 - release 3.1.5
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#63 - - Prepare more robust and optimized to subsets of coordinates and Til…
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#62 - Releasing devel 3.1.4
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#61 - update deel with master
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#60 - Fix refine
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#59 - Some prepare fixes
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#58 - Releasing 3.1.3
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#57 - Fix refine
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#56 - Jj fix step range data type
Pull Request -
State: closed - Opened by JorMaister over 1 year ago
#55 - Fix refine
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#54 - update some labels and range values in validators according to the la…
Pull Request -
State: closed - Opened by JorMaister over 1 year ago
#53 - --sigma_tilt --sigma_phi --sigma_rot
Issue -
State: closed - Opened by brodriguezdefrancisco over 1 year ago
- 6 comments
#52 - release devel
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#51 - - Fix: Fiducial size in prepare is now correct (in Å)
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#50 - adjustments on the entry to relion-4
Pull Request -
State: closed - Opened by MohamadHarastani over 1 year ago
#49 - release devel
Pull Request -
State: closed - Opened by pconesa over 1 year ago
#48 - RELION_CUDA_BIN definition error
Issue -
State: open - Opened by wlugmayr over 1 year ago
#47 - Patch coords exist
Pull Request -
State: closed - Opened by fonsecareyna82 over 1 year ago
#46 - Update publish_and_tag.yml
Pull Request -
State: closed - Opened by pconesa almost 2 years ago
#44 - Update publish_and_tag.yml
Pull Request -
State: closed - Opened by pconesa almost 2 years ago
#43 - Update publish_and_tag.yml
Pull Request -
State: closed - Opened by pconesa almost 2 years ago
#42 - * Updating the README.rst and the CHANGES.txt
Pull Request -
State: closed - Opened by fonsecareyna82 almost 2 years ago
#41 - * Fixing pseudoSubtomograms2Star method
Pull Request -
State: closed - Opened by fonsecareyna82 almost 2 years ago
#40 - reliontomo protocols have to be found by searching, they do not appear in the left panel
Issue -
State: closed - Opened by Vilax almost 2 years ago
- 2 comments
#39 - * Creating a new protocol to compare a sets of pseudosubtomograms
Pull Request -
State: closed - Opened by fonsecareyna82 almost 2 years ago
#38 - reliontomo: 3d classification --flatten_solvent parameter
Issue -
State: open - Opened by plosana almost 2 years ago
- 7 comments
#37 - TestRefineCycle testExtractCoordsFromPSubtomos failes due to assertion
Issue -
State: closed - Opened by MohamadHarastani almost 2 years ago
- 1 comment
#35 - flag landmarkmodel to not applyTStransformation
Pull Request -
State: closed - Opened by pconesa almost 2 years ago
#34 - Gen proj coords
Pull Request -
State: closed - Opened by pconesa almost 2 years ago
#33 - Jj update prepare validation and cl3d
Pull Request -
State: closed - Opened by JorMaister almost 2 years ago
#32 - Reliontomo 3d classify keeps the gpu when copied
Issue -
State: open - Opened by pconesa almost 2 years ago
#31 - Jj new data model subset
Pull Request -
State: closed - Opened by JorMaister about 2 years ago
#30 - Fix prepare:
Pull Request -
State: closed - Opened by pconesa over 2 years ago
#29 - log "star file being created"
Pull Request -
State: closed - Opened by pconesa over 2 years ago
#28 - This generates the right euler angles for relion starfile from our ne…
Pull Request -
State: closed - Opened by pconesa over 2 years ago
#27 - * Changing the prepare data protocol.
Pull Request -
State: closed - Opened by fonsecareyna82 over 2 years ago
#26 - New prepare data
Pull Request -
State: closed - Opened by fonsecareyna82 over 2 years ago
#25 - Jj re4 convert refactor
Pull Request -
State: closed - Opened by JorMaister almost 3 years ago
#24 - Jj test convert
Pull Request -
State: closed - Opened by JorMaister almost 3 years ago
#23 - new scheme
Pull Request -
State: closed - Opened by Vilax almost 3 years ago
#22 - release devel
Pull Request -
State: closed - Opened by pconesa about 3 years ago
#21 - Jj fixes re3
Pull Request -
State: closed - Opened by JorMaister about 3 years ago
#20 - Update the reference to IMOD CTF estimation protocol, renamed in its …
Pull Request -
State: closed - Opened by JorMaister about 3 years ago
#19 - Re4 integration
Issue -
State: closed - Opened by JorMaister over 3 years ago
#18 - send devel to pypi
Pull Request -
State: closed - Opened by pconesa over 3 years ago
#17 - Reliontomo - it must install relion 3.0 because it's no longer installed by Relion
Issue -
State: closed - Opened by JorMaister over 3 years ago
#16 - reliontomo - ctf3d, check mpi functionality
Issue -
State: closed - Opened by JorMaister over 3 years ago
#15 - Jj dose from mdoc case added
Pull Request -
State: closed - Opened by JorMaister over 3 years ago
#14 - Jj fix mpi ctf3d
Pull Request -
State: closed - Opened by JorMaister over 3 years ago
#13 - Fix tests
Pull Request -
State: closed - Opened by JorMaister over 3 years ago
#12 - Reliontomo: classify must return the subtomograms, too
Issue -
State: closed - Opened by JorMaister over 3 years ago
#11 - Fix constants name and imports
Pull Request -
State: closed - Opened by JorMaister over 3 years ago
#10 - Jj adapt to tomo ctf
Pull Request -
State: closed - Opened by JorMaister over 3 years ago
#9 - Split RELION_HOME into two variables, one for relion plugin and the o…
Pull Request -
State: closed - Opened by JorMaister over 3 years ago