Ecosyste.ms: Issues

An open API service for providing issue and pull request metadata for open source projects.

GitHub / scipion-em/scipion-em-reliontomo issues and pull requests

#101 - Re-extract does not generate the fiducials anymore. Update tests. Add…

Pull Request - State: closed - Opened by JorMaister 19 days ago - 1 comment

#100 - Jj reliontomo5

Pull Request - State: open - Opened by JorMaister 20 days ago - 1 comment

#99 - Jj jj reliontomo5 nested dirs

Pull Request - State: closed - Opened by JorMaister 25 days ago - 1 comment

#98 - - Fix inspect in buildbot: Tkagg not set in wizard module.

Pull Request - State: closed - Opened by pconesa 27 days ago - 1 comment

#97 - Jj deprecate re3 and improve warns

Pull Request - State: closed - Opened by JorMaister 3 months ago - 1 comment

#96 - Prevent box sizes to be of the same value

Issue - State: open - Opened by JorMaister 3 months ago

#95 - Release 3.3.0

Pull Request - State: closed - Opened by JorMaister 3 months ago - 1 comment

#94 - Release 3.4.0

Pull Request - State: closed - Opened by JorMaister 3 months ago - 1 comment

#93 - Enhancing the helps and use of RelionTomo4

Pull Request - State: closed - Opened by Vilax 4 months ago - 1 comment

#92 - Fixes #90 #91

Pull Request - State: closed - Opened by JorMaister 4 months ago - 1 comment

#89 - Jj update tests add likely max dist

Pull Request - State: open - Opened by JorMaister 5 months ago - 1 comment

#87 - Release 3.2.2

Pull Request - State: closed - Opened by JorMaister 5 months ago - 1 comment

#86 - Fix the 3d classification Scipion Classes objects generation (previou…

Pull Request - State: closed - Opened by JorMaister 5 months ago - 1 comment

#85 - Fix: the coordinates generated in the convert input step of the prepa…

Pull Request - State: closed - Opened by JorMaister 5 months ago - 1 comment

#84 - Verify relion prepare with excluded views.

Issue - State: closed - Opened by pconesa 6 months ago

#82 - Release patched

Pull Request - State: closed - Opened by JorMaister 7 months ago - 1 comment

#81 - Update MANIFEST.in

Pull Request - State: closed - Opened by pconesa 7 months ago - 1 comment

#80 - v3.2.1

Pull Request - State: closed - Opened by pconesa 7 months ago - 1 comment

#77 - Jj fix tests

Pull Request - State: closed - Opened by JorMaister 10 months ago

#76 - Fix: Relion output now copies the acquisition.

Pull Request - State: closed - Opened by pconesa 10 months ago

#74 - bump version to 3.2.0

Pull Request - State: closed - Opened by pconesa about 1 year ago

#73 - release 3.2.0

Pull Request - State: closed - Opened by pconesa about 1 year ago

#72 - * Adding a menu bar

Pull Request - State: closed - Opened by fonsecareyna82 about 1 year ago

#71 - Wizard reliontomoo part

Pull Request - State: closed - Opened by fonsecareyna82 about 1 year ago

#70 - Update CHANGES.txt

Pull Request - State: closed - Opened by fonsecareyna82 about 1 year ago

#69 - - 3D Classification defines its possible outputs

Pull Request - State: closed - Opened by pconesa about 1 year ago

#68 - * Plotting all FSCs

Pull Request - State: closed - Opened by fonsecareyna82 about 1 year ago - 1 comment

#67 - release 3d classification fix and refine using optimization set

Pull Request - State: closed - Opened by pconesa about 1 year ago

#66 - Refine and 3D classification use and register optimisation_set.star f…

Pull Request - State: closed - Opened by pconesa about 1 year ago

#65 - - 3D Classification more completed/standard

Pull Request - State: closed - Opened by pconesa about 1 year ago

#64 - release 3.1.5

Pull Request - State: closed - Opened by pconesa about 1 year ago

#63 - - Prepare more robust and optimized to subsets of coordinates and Til…

Pull Request - State: closed - Opened by pconesa about 1 year ago

#62 - Releasing devel 3.1.4

Pull Request - State: closed - Opened by pconesa about 1 year ago

#61 - update deel with master

Pull Request - State: closed - Opened by pconesa about 1 year ago

#60 - Fix refine

Pull Request - State: closed - Opened by pconesa about 1 year ago

#59 - Some prepare fixes

Pull Request - State: closed - Opened by pconesa over 1 year ago

#58 - Releasing 3.1.3

Pull Request - State: closed - Opened by pconesa over 1 year ago

#57 - Fix refine

Pull Request - State: closed - Opened by pconesa over 1 year ago

#56 - Jj fix step range data type

Pull Request - State: closed - Opened by JorMaister over 1 year ago

#55 - Fix refine

Pull Request - State: closed - Opened by pconesa over 1 year ago

#53 - --sigma_tilt --sigma_phi --sigma_rot

Issue - State: closed - Opened by brodriguezdefrancisco over 1 year ago - 6 comments

#52 - release devel

Pull Request - State: closed - Opened by pconesa over 1 year ago

#51 - - Fix: Fiducial size in prepare is now correct (in Å)

Pull Request - State: closed - Opened by pconesa over 1 year ago

#50 - adjustments on the entry to relion-4

Pull Request - State: closed - Opened by MohamadHarastani over 1 year ago

#49 - release devel

Pull Request - State: closed - Opened by pconesa over 1 year ago

#48 - RELION_CUDA_BIN definition error

Issue - State: open - Opened by wlugmayr over 1 year ago

#47 - Patch coords exist

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#46 - Update publish_and_tag.yml

Pull Request - State: closed - Opened by pconesa over 1 year ago

#45 - k

Pull Request - State: closed - Opened by pconesa over 1 year ago

#44 - Update publish_and_tag.yml

Pull Request - State: closed - Opened by pconesa over 1 year ago

#43 - Update publish_and_tag.yml

Pull Request - State: closed - Opened by pconesa over 1 year ago

#42 - * Updating the README.rst and the CHANGES.txt

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#41 - * Fixing pseudoSubtomograms2Star method

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#39 - * Creating a new protocol to compare a sets of pseudosubtomograms

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#38 - reliontomo: 3d classification --flatten_solvent parameter

Issue - State: open - Opened by plosana over 1 year ago - 7 comments

#37 - TestRefineCycle testExtractCoordsFromPSubtomos failes due to assertion

Issue - State: closed - Opened by MohamadHarastani over 1 year ago - 1 comment

#35 - flag landmarkmodel to not applyTStransformation

Pull Request - State: closed - Opened by pconesa over 1 year ago

#34 - Gen proj coords

Pull Request - State: closed - Opened by pconesa over 1 year ago

#33 - Jj update prepare validation and cl3d

Pull Request - State: closed - Opened by JorMaister over 1 year ago

#32 - Reliontomo 3d classify keeps the gpu when copied

Issue - State: open - Opened by pconesa over 1 year ago

#31 - Jj new data model subset

Pull Request - State: closed - Opened by JorMaister almost 2 years ago

#30 - Fix prepare:

Pull Request - State: closed - Opened by pconesa about 2 years ago

#29 - log "star file being created"

Pull Request - State: closed - Opened by pconesa about 2 years ago

#28 - This generates the right euler angles for relion starfile from our ne…

Pull Request - State: closed - Opened by pconesa over 2 years ago

#27 - * Changing the prepare data protocol.

Pull Request - State: closed - Opened by fonsecareyna82 over 2 years ago

#26 - New prepare data

Pull Request - State: closed - Opened by fonsecareyna82 over 2 years ago

#25 - Jj re4 convert refactor

Pull Request - State: closed - Opened by JorMaister over 2 years ago

#24 - Jj test convert

Pull Request - State: closed - Opened by JorMaister over 2 years ago

#23 - new scheme

Pull Request - State: closed - Opened by Vilax over 2 years ago

#22 - release devel

Pull Request - State: closed - Opened by pconesa almost 3 years ago

#21 - Jj fixes re3

Pull Request - State: closed - Opened by JorMaister almost 3 years ago

#20 - Update the reference to IMOD CTF estimation protocol, renamed in its …

Pull Request - State: closed - Opened by JorMaister almost 3 years ago

#19 - Re4 integration

Issue - State: closed - Opened by JorMaister about 3 years ago

#18 - send devel to pypi

Pull Request - State: closed - Opened by pconesa about 3 years ago

#16 - reliontomo - ctf3d, check mpi functionality

Issue - State: closed - Opened by JorMaister about 3 years ago

#15 - Jj dose from mdoc case added

Pull Request - State: closed - Opened by JorMaister about 3 years ago

#14 - Jj fix mpi ctf3d

Pull Request - State: closed - Opened by JorMaister about 3 years ago

#13 - Fix tests

Pull Request - State: closed - Opened by JorMaister over 3 years ago

#12 - Reliontomo: classify must return the subtomograms, too

Issue - State: closed - Opened by JorMaister over 3 years ago

#11 - Fix constants name and imports

Pull Request - State: closed - Opened by JorMaister over 3 years ago

#10 - Jj adapt to tomo ctf

Pull Request - State: closed - Opened by JorMaister over 3 years ago

#7 - Devel

Pull Request - State: closed - Opened by JorMaister over 3 years ago

#6 - Jj fix init avoid bin conflicts

Pull Request - State: closed - Opened by JorMaister over 3 years ago

#5 - Move protocols to section subtomogram averaging

Pull Request - State: closed - Opened by JorMaister over 3 years ago - 1 comment

#4 - Update publish_and_tag.yml

Pull Request - State: closed - Opened by pconesa almost 4 years ago

#3 - Update publish_and_tag.yml

Pull Request - State: closed - Opened by pconesa almost 4 years ago

#2 - Release

Pull Request - State: closed - Opened by JorMaister almost 4 years ago