scipion-em/scipion-em-cryosparc2 issues and pull requests

#173 - Rm homogeneous reconstruction

Pull Request - State: open - Opened by rmarabini 12 days ago

#172 - scipion-em-cryospark flex generator

Issue - State: open - Opened by rmarabini 17 days ago

#171 - flex mesh prepare

Issue - State: open - Opened by rmarabini 17 days ago - 2 comments

#170 - help on field "mask" for protocol "cryosparc homogeneous reconstruction"

Issue - State: open - Opened by rmarabini 17 days ago

#169 - Compatibility with cryoSPARC v4.6

Pull Request - State: closed - Opened by fonsecareyna82 about 2 months ago

#168 - variables described

Pull Request - State: closed - Opened by pconesa about 2 months ago

#167 - fix "focus mask" parameter

Pull Request - State: closed - Opened by rmarabini 3 months ago

#166 - deve to master

Pull Request - State: closed - Opened by fonsecareyna82 4 months ago

#165 - Change direct pointers to indirect pointers

Pull Request - State: closed - Opened by danielmarchan3 5 months ago
Labels: enhancement

#164 - JMK typos from course

Pull Request - State: closed - Opened by jamesmkrieger 5 months ago

#163 - avoid getting the version at inspect

Pull Request - State: closed - Opened by pconesa 5 months ago

#162 - adding use_ssd parameter in some protocols

Pull Request - State: closed - Opened by fonsecareyna82 5 months ago

#161 - installation hot fix

Pull Request - State: closed - Opened by fonsecareyna82 6 months ago

#160 - devel to master

Pull Request - State: closed - Opened by fonsecareyna82 6 months ago

#159 - devel to master

Pull Request - State: closed - Opened by fonsecareyna82 7 months ago

#158 - Add import coords from cryoSparc

Issue - State: open - Opened by JorMaister 7 months ago
Labels: user's meeting

#157 - * Add 3D flex protocols

Pull Request - State: closed - Opened by fonsecareyna82 7 months ago

#156 - fixing a compatibility bug

Pull Request - State: closed - Opened by fonsecareyna82 8 months ago

#155 - Compatibility with cryoSPARC v4.4.1

Pull Request - State: closed - Opened by fonsecareyna82 10 months ago

#154 - Blob picker and CTF estimation protocols

Pull Request - State: closed - Opened by fonsecareyna82 11 months ago

#153 - Compatibility with v4.4.0

Pull Request - State: closed - Opened by fonsecareyna82 about 1 year ago

#152 - * Handling stop jobs

Pull Request - State: closed - Opened by fonsecareyna82 about 1 year ago

#151 - Convert .cs to .star using the own approach

Issue - State: open - Opened by fonsecareyna82 about 1 year ago

#150 - Catch error when converting with pyem

Issue - State: closed - Opened by fonsecareyna82 about 1 year ago

#149 - Update cs2Start.py

Pull Request - State: closed - Opened by mmmtnez about 1 year ago - 1 comment

#148 - change 00%s by .zfill(5)

Pull Request - State: closed - Opened by rmarabini about 1 year ago - 3 comments

#147 - Compatibily wit v4.3.1

Pull Request - State: closed - Opened by fonsecareyna82 about 1 year ago

#146 - Generation of star files using relion cancelled (not robust in all ca…

Pull Request - State: closed - Opened by pconesa about 1 year ago - 2 comments

#145 - Update README.rst

Pull Request - State: closed - Opened by pconesa about 1 year ago

#144 - use cryosparc output as relion input

Issue - State: closed - Opened by rmarabini almost 2 years ago - 10 comments

#143 - devel to master

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#142 - devel to master

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#141 - devel to master

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#140 - Cs flex

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#139 - ProtCryoSparcHomogeneousReconstruct error

Issue - State: open - Opened by rmarabini over 1 year ago

#138 - devel to master

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago - 1 comment

#137 - Cs flex

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#136 - devel to master

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#135 - Updating the scritp to convert a .cs file to a .star

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#134 - Compatibility with cryoSPARC v4.2

Pull Request - State: closed - Opened by fonsecareyna82 over 1 year ago

#133 - devel to master

Pull Request - State: closed - Opened by fonsecareyna82 almost 2 years ago

#132 - Create pyem env

Pull Request - State: closed - Opened by fonsecareyna82 almost 2 years ago

#131 - Bump numpy from 1.18.4 to 1.22.0

Pull Request - State: closed - Opened by dependabot[bot] almost 2 years ago - 1 comment
Labels: dependencies

#130 - devel to master

Pull Request - State: closed - Opened by fonsecareyna82 almost 2 years ago

#129 - merging devel with master

Pull Request - State: closed - Opened by fonsecareyna82 about 2 years ago

#128 - * Fixed an error related to Phase Randomized Masket Map calculation

Pull Request - State: closed - Opened by fonsecareyna82 about 2 years ago

#127 - update the way the outfile names are computed

Pull Request - State: closed - Opened by rmarabini about 2 years ago - 3 comments

#126 - devel to master. Realease 3.3.18

Pull Request - State: closed - Opened by fonsecareyna82 about 2 years ago

#125 - * Allow to import .cs particles files

Pull Request - State: closed - Opened by fonsecareyna82 about 2 years ago

#124 - add CTF to output

Pull Request - State: closed - Opened by rmarabini about 2 years ago

#123 - * Fixing an error related with 3D Classification(allowing 31 or more …

Pull Request - State: closed - Opened by fonsecareyna82 about 2 years ago