Ecosyste.ms: Issues

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GitHub / scipion-em/scipion-em-cistem issues and pull requests

#93 - Save ice ring density

Issue - State: open - Opened by azazellochg about 1 month ago

#92 - Fix tilt-series ctffind parallelization by locking the the whole crea…

Pull Request - State: closed - Opened by JorMaister about 1 month ago - 1 comment

#91 - check plugin operation without scipion-em-tomo

Issue - State: closed - Opened by azazellochg about 1 month ago - 1 comment

#90 - 3.9.1

Pull Request - State: closed - Opened by azazellochg about 2 months ago

#89 - ctffind fails with powerSpectra=False

Issue - State: closed - Opened by azazellochg about 2 months ago - 1 comment
Labels: bug

#88 - enhancing the main help and minor issues

Pull Request - State: closed - Opened by Vilax 2 months ago

#87 - Error in ctffind wiwth several threads

Issue - State: closed - Opened by Vilax 2 months ago - 5 comments
Labels: bug

#86 - 3.9

Pull Request - State: closed - Opened by azazellochg 3 months ago

#85 - add new options to TS ctf estimation

Issue - State: open - Opened by azazellochg 3 months ago
Labels: enhancement

#84 - TsCtffind - fill the acquisition order in the createOutputStep

Pull Request - State: closed - Opened by JorMaister 3 months ago

#83 - Update the acquisition order in the CTFTomo objects

Pull Request - State: closed - Opened by JorMaister 3 months ago

#82 - Fixed dimensions of output sets

Pull Request - State: closed - Opened by rdrighetto 4 months ago - 5 comments

#81 - add ctffind5, rename config vars

Pull Request - State: closed - Opened by azazellochg 4 months ago

#80 - 3.8

Pull Request - State: closed - Opened by azazellochg 4 months ago

#79 - Resample

Pull Request - State: closed - Opened by azazellochg 4 months ago

#78 - suggested improvements

Pull Request - State: closed - Opened by azazellochg 4 months ago

#77 - Added protocols to resample tomograms and tilt-series

Pull Request - State: closed - Opened by rdrighetto 5 months ago - 1 comment

#76 - fix an obsolete import in the viewer

Pull Request - State: closed - Opened by JorMaister 5 months ago

#75 - Import tomo ctf: tolerate exlusions?

Issue - State: closed - Opened by pconesa 6 months ago - 4 comments

#74 - Jj improve ts ctffind and import

Pull Request - State: closed - Opened by JorMaister 6 months ago - 5 comments

#73 - 3.6

Pull Request - State: closed - Opened by azazellochg 7 months ago

#71 - Allow delete

Pull Request - State: closed - Opened by pconesa 8 months ago

#70 - 3.5

Pull Request - State: closed - Opened by azazellochg 9 months ago

#69 - Cistem 2d fix

Pull Request - State: closed - Opened by JoQCcoz 10 months ago

#68 - CTFfinds fails with several threads

Issue - State: closed - Opened by Vilax 10 months ago
Labels: bug

#67 - 3.4

Pull Request - State: closed - Opened by azazellochg over 1 year ago

#66 - output more logs during install

Issue - State: closed - Opened by azazellochg over 1 year ago

#65 - 3.3

Pull Request - State: closed - Opened by azazellochg almost 2 years ago

#64 - check import ctfs from ctffind for tomo

Issue - State: closed - Opened by azazellochg almost 2 years ago - 1 comment

#63 - 3.2

Pull Request - State: closed - Opened by azazellochg almost 2 years ago

#62 - refactor to process TS stacks

Pull Request - State: closed - Opened by azazellochg almost 2 years ago - 5 comments

#61 - 3.1.3

Pull Request - State: closed - Opened by azazellochg over 2 years ago

#60 - Tolerate tomo absence

Pull Request - State: closed - Opened by pconesa over 2 years ago

#59 - Weak import

Pull Request - State: closed - Opened by fonsecareyna82 over 2 years ago

#58 - Decouple from tomo

Pull Request - State: closed - Opened by pconesa over 2 years ago - 1 comment

#57 - new tomo scheme

Pull Request - State: closed - Opened by Vilax over 2 years ago

#56 - fix tomo test

Pull Request - State: closed - Opened by azazellochg over 2 years ago

#55 - ctffind4 does not generate results with TS

Issue - State: closed - Opened by Vilax over 2 years ago - 7 comments

#53 - release changes

Pull Request - State: closed - Opened by azazellochg almost 3 years ago

#51 - Fix streaming error

Pull Request - State: closed - Opened by fonsecareyna82 about 3 years ago

#50 - * Creating a method to tolerate imports errors

Pull Request - State: closed - Opened by fonsecareyna82 about 3 years ago - 4 comments

#49 - Tolerate imports errors

Pull Request - State: closed - Opened by fonsecareyna82 about 3 years ago

#48 - Registering psd file correctly

Pull Request - State: closed - Opened by fonsecareyna82 about 3 years ago

#47 - run on ts stacks

Issue - State: closed - Opened by azazellochg about 3 years ago

#46 - Viewer

Pull Request - State: closed - Opened by azazellochg about 3 years ago

#45 - * Updating protocols.conf file

Pull Request - State: closed - Opened by fonsecareyna82 about 3 years ago

#44 - * Refactoring ts_ctffind

Pull Request - State: closed - Opened by fonsecareyna82 about 3 years ago

#43 - Ts ctffind refactor

Pull Request - State: closed - Opened by fonsecareyna82 about 3 years ago

#42 - Gain fixing

Pull Request - State: closed - Opened by azazellochg over 3 years ago

#41 - Gain fixing

Pull Request - State: closed - Opened by azazellochg over 3 years ago

#40 - Gain fixing

Pull Request - State: closed - Opened by DaniDelHoyo over 3 years ago

#39 - Cistem: Update output to new CTF object

Issue - State: closed - Opened by JorMaister over 3 years ago - 3 comments

#38 - Ctffind for tilt series not working

Issue - State: closed - Opened by JorMaister over 3 years ago - 3 comments

#37 - Fix broken link again

Pull Request - State: closed - Opened by azazellochg over 3 years ago

#36 - 3.1.0 release

Pull Request - State: closed - Opened by azazellochg over 3 years ago

#35 - fix unblur when scratch dir var active: using absolute paths.

Pull Request - State: closed - Opened by pconesa over 3 years ago

#34 - Do not offer to view Mics or DW mics in unblurr viewer if output does…

Pull Request - State: closed - Opened by pconesa over 3 years ago - 1 comment

#33 - release 3.1.0

Pull Request - State: closed - Opened by azazellochg over 3 years ago

#32 - ctffind: not found

Issue - State: closed - Opened by DStrelak over 3 years ago - 5 comments

#31 - 3.0.9

Pull Request - State: closed - Opened by azazellochg over 3 years ago

#30 - actions test

Pull Request - State: closed - Opened by azazellochg over 3 years ago

#29 - Actions

Pull Request - State: closed - Opened by azazellochg over 3 years ago

#28 - fix some default args, add PS support

Pull Request - State: closed - Opened by azazellochg over 3 years ago

#27 - 3.0.7

Pull Request - State: closed - Opened by azazellochg almost 4 years ago

#26 - add power spectra sums as input

Issue - State: closed - Opened by azazellochg almost 4 years ago

#25 - add 4.1.14

Pull Request - State: closed - Opened by azazellochg almost 4 years ago

#24 - add ctffind 4.1.14 binary

Issue - State: closed - Opened by azazellochg almost 4 years ago

#23 - read_error_from_ctffile

Pull Request - State: closed - Opened by pconesa about 4 years ago

#22 - close #15

Pull Request - State: closed - Opened by azazellochg about 4 years ago

#21 - 3.0.4

Pull Request - State: closed - Opened by azazellochg about 4 years ago

#20 - bump version

Pull Request - State: closed - Opened by azazellochg about 4 years ago - 1 comment

#19 - master=scipion3.0.0

Pull Request - State: closed - Opened by azazellochg about 4 years ago - 1 comment

#18 - Python3 migration

Pull Request - State: closed - Opened by azazellochg about 4 years ago - 1 comment

#17 - remove files not needed anymore by nova

Pull Request - State: closed - Opened by fede-pe about 4 years ago - 1 comment

#16 - ProtTsCtffind not working

Issue - State: closed - Opened by JorMaister about 4 years ago - 8 comments

#15 - picking does not work in streaming

Issue - State: closed - Opened by azazellochg about 4 years ago

#14 - Create .sonarcloud.properties

Pull Request - State: closed - Opened by azazellochg about 4 years ago - 1 comment

#13 - CTF tilt-series estimation with Ctffind4

Issue - State: closed - Opened by fede-pe about 4 years ago - 5 comments

#12 - keep some extra output files for compatibility with NovaCTF

Pull Request - State: closed - Opened by fede-pe about 4 years ago - 1 comment

#11 - refactor gui, add tomo

Pull Request - State: closed - Opened by azazellochg over 4 years ago - 1 comment

#10 - check if ctffind4 runs independently

Issue - State: closed - Opened by azazellochg over 4 years ago - 1 comment

#9 - Using emlib

Pull Request - State: closed - Opened by delarosatrevin over 4 years ago

#8 - Devel

Pull Request - State: closed - Opened by azazellochg over 4 years ago

#7 - patch movie alignment create output. do not add ctffind4 if grigorief…

Pull Request - State: closed - Opened by pconesa over 4 years ago

#6 - check picking test

Issue - State: closed - Opened by azazellochg over 4 years ago - 1 comment

#5 - find particles rescale references automatically

Issue - State: closed - Opened by azazellochg over 4 years ago

#4 - refine2d

Issue - State: closed - Opened by azazellochg over 4 years ago

#3 - Redo ctffind results plot

Issue - State: closed - Opened by azazellochg over 4 years ago

#2 - Ctffind supports movies

Issue - State: open - Opened by azazellochg over 4 years ago - 1 comment
Labels: wontfix

#1 - Unblur supports tif movies

Issue - State: closed - Opened by azazellochg over 4 years ago